RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
HMGN1-201ENST00000288344 RHEBQ15382 184 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 C14orf177Q52M58 125 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 AMMECR1LQ6DCA0 310 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 Q8N8P6 123 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 OPRPNQ99935 248 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-201ENST00000288344 GNB1LQ9BYB4 327 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 GVQW2A0A096LPI5 108 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-201ENST00000288344 CCL25O15444 150 aa5.87□□□□□ -1.47
HMGN1-201ENST00000288344 FCER1GP30273 86 aa5.87□□□□□ -1.47
HMGN1-201ENST00000288344 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
HMGN1-201ENST00000288344 IGHV3OR16-9A0A0B4J2B5 98 aa5.86□□□□□ -1.47
HMGN1-201ENST00000288344 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
HMGN1-201ENST00000288344 HAMPP81172 84 aa5.86□□□□□ -1.47
HMGN1-201ENST00000288344 Q6ZUT4 128 aa5.86□□□□□ -1.47
HMGN1-201ENST00000288344 TMEM101Q96IK0 257 aa5.86□□□□□ -1.47
HMGN1-201ENST00000288344 ALKBH7Q9BT30 221 aaPredicted RBP5.86□□□□□ -1.47
HMGN1-201ENST00000288344 CHAC1Q9BUX1 264 aa5.86□□□□□ -1.47
HMGN1-201ENST00000288344 C1orf196B1AJZ1 125 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 K7EMI3 77 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 SMR3BP02814 79 aaPredicted RBP5.85□□□□□ -1.47
HMGN1-201ENST00000288344 KIAA1644Q3SXP7 199 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 LINC00173Q6ZV60 143 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 SCXQ7RTU7 201 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 AMELXQ99217 191 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 SPANXA1Q9NS26 97 aa5.85□□□□□ -1.47
HMGN1-201ENST00000288344 FLG2Q5D862 2391 aaPredicted RBP5.84□□□□□ -1.47
HMGN1-201ENST00000288344 IGLV4-3A0A075B6K6 122 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 IGKV3OR2-268A0A0C4DH90 116 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 LOC389332A0A1B0GUA5 103 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 EPM2AB3EWF7 344 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 IFI27P40305 119 aaPredicted RBP5.84□□□□□ -1.47
HMGN1-201ENST00000288344 XCL1P47992 114 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 RNASE13Q5GAN3 156 aaKnown RBP5.84□□□□□ -1.47
HMGN1-201ENST00000288344 URB1-AS1Q96HZ7 61 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 MAP1LC3AQ9H492 121 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 RPS10P5Q9NQ39 176 aa5.84□□□□□ -1.47
HMGN1-201ENST00000288344 TGIF2-C20orf24A0A0A6YYL0 155 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 hDV102S1A0JD36 115 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 NPSP0C0P6 89 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 SS18Q15532 418 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 COX19Q49B96 90 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 FAM19A3Q7Z5A8 133 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 TMEM18Q96B42 140 aa5.83□□□□□ -1.48
HMGN1-201ENST00000288344 IGHV1-58A0A0C4DH39 117 aa5.82□□□□□ -1.48
HMGN1-201ENST00000288344 APOC3P02656 99 aa5.82□□□□□ -1.48
HMGN1-201ENST00000288344 COX6A2Q02221 97 aa5.82□□□□□ -1.48
HMGN1-201ENST00000288344 SMAGPQ0VAQ4 97 aa5.82□□□□□ -1.48
HMGN1-201ENST00000288344 LINC00242Q5T6M2 205 aa5.82□□□□□ -1.48
HMGN1-201ENST00000288344 C2orf66Q6UXQ4 117 aa5.82□□□□□ -1.48
HMGN1-201ENST00000288344 NXT2Q9NPJ8 142 aaKnown RBP5.82□□□□□ -1.48
HMGN1-201ENST00000288344 A0A096LNJ9 63 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 TRAV13-1A0A0B4J241 112 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 MT-ND6P03923 174 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 RAB5AP20339 215 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 S100PP25815 95 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 UBE2D1P51668 147 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 HIGD2BQ4VC39 106 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 Q5VSD8 79 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 SLC7A5P1Q8MH63 180 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 SVBPQ8N300 66 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 PRSS3P2Q8NHM4 247 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 TOMM6Q96B49 74 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 LINC00526Q96FQ7 95 aa5.81□□□□□ -1.48
HMGN1-201ENST00000288344 SNAPINO95295 136 aa5.8□□□□□ -1.48
HMGN1-201ENST00000288344 ORMDL2Q53FV1 153 aa5.8□□□□□ -1.48
HMGN1-201ENST00000288344 ZC2HC1BQ5TFG8 222 aa5.8□□□□□ -1.48
HMGN1-201ENST00000288344 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
HMGN1-201ENST00000288344 TNXBP22105 4242 aa5.8□□□□□ -1.48
HMGN1-201ENST00000288344 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 A0A087WZ39 114 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 COX7A2LO14548 114 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 C5orf38Q86SI9 138 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 TMEM141Q96I45 108 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 TIMM17AQ99595 171 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 PLAC8Q9NZF1 115 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 CYSLTR1Q9Y271 337 aa5.79□□□□□ -1.48
HMGN1-201ENST00000288344 IGLV4-69A0A075B6H9 119 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 CHTF8P0CG12 524 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 FABP9Q0Z7S8 132 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 ERASQ7Z444 233 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 LINC01561Q8N1V8 128 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 C18orf32Q8TCD1 76 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 C2orf48Q96LS8 159 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
HMGN1-201ENST00000288344 A0A087WYN8 130 aa5.77□□□□□ -1.49
HMGN1-201ENST00000288344 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-201ENST00000288344 Q6ZRU5 148 aa5.77□□□□□ -1.49
HMGN1-201ENST00000288344 IFITM10A6NMD0 228 aa5.76□□□□□ -1.49
HMGN1-201ENST00000288344 SYCNQ0VAF6 134 aa5.76□□□□□ -1.49
HMGN1-201ENST00000288344 C10orf25Q5T742 122 aa5.76□□□□□ -1.49
HMGN1-201ENST00000288344 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
HMGN1-201ENST00000288344 OR10D4PQ8NGN7 298 aa5.76□□□□□ -1.49
HMGN1-201ENST00000288344 TRAPPC1Q9Y5R8 145 aa5.76□□□□□ -1.49
HMGN1-201ENST00000288344 IGLV5-45A0A087WSX0 123 aa5.75□□□□□ -1.49
HMGN1-201ENST00000288344 A0A096LNI7 61 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms