RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 LINC00528Q8N1L1 170 aa16.13■□□□□ 0.17
PDF-201ENST00000288022 TRAPPC1Q9Y5R8 145 aa16.13■□□□□ 0.17
PDF-201ENST00000288022 APOMO95445 188 aa16.12■□□□□ 0.17
PDF-201ENST00000288022 C2orf88Q9BSF0 95 aa16.12■□□□□ 0.17
PDF-201ENST00000288022 DPH3Q96FX2 82 aa16.11■□□□□ 0.17
PDF-201ENST00000288022 CARD19Q96LW7 228 aa16.11■□□□□ 0.17
PDF-201ENST00000288022 PANO1I0J062 215 aa16.1■□□□□ 0.17
PDF-201ENST00000288022 COX6A2Q02221 97 aa16.1■□□□□ 0.17
PDF-201ENST00000288022 VCX2Q9H322 139 aa16.1■□□□□ 0.17
PDF-201ENST00000288022 IGLV4-69A0A075B6H9 119 aa16.09■□□□□ 0.17
PDF-201ENST00000288022 IGIPA6NJ69 53 aa16.09■□□□□ 0.17
PDF-201ENST00000288022 SYCNQ0VAF6 134 aa16.09■□□□□ 0.17
PDF-201ENST00000288022 FA2HQ7L5A8 372 aa16.09■□□□□ 0.17
PDF-201ENST00000288022 IGHV3OR16-9A0A0B4J2B5 98 aa16.08■□□□□ 0.16
PDF-201ENST00000288022 NPSP0C0P6 89 aa16.08■□□□□ 0.16
PDF-201ENST00000288022 CHTF8P0CG12 524 aa16.08■□□□□ 0.16
PDF-201ENST00000288022 ZC2HC1BQ5TFG8 222 aa16.08■□□□□ 0.16
PDF-201ENST00000288022 TOMM6Q96B49 74 aa16.08■□□□□ 0.16
PDF-201ENST00000288022 SMCO4Q9NRQ5 59 aa16.08■□□□□ 0.16
PDF-201ENST00000288022 PLA2G1BP04054 148 aaKnown RBP16.07■□□□□ 0.16
PDF-201ENST00000288022 INAFM2P0DMQ5 153 aa16.07■□□□□ 0.16
PDF-201ENST00000288022 SPAG11BQ08648 103 aa16.07■□□□□ 0.16
PDF-201ENST00000288022 SLC7A5P1Q8MH63 180 aa16.07■□□□□ 0.16
PDF-201ENST00000288022 PAPPA-AS1Q5QFB9 102 aa16.06■□□□□ 0.16
PDF-201ENST00000288022 LINC00242Q5T6M2 205 aa16.06■□□□□ 0.16
PDF-201ENST00000288022 CAMK2N2Q96S95 79 aa16.06■□□□□ 0.16
PDF-201ENST00000288022 UBE2D1P51668 147 aa16.05■□□□□ 0.16
PDF-201ENST00000288022 CIRBPQ14011 172 aaKnown RBP16.05■□□□□ 0.16
PDF-201ENST00000288022 LINC00173Q6ZV60 143 aa16.05■□□□□ 0.16
PDF-201ENST00000288022 ORAOV1Q8WV07 137 aa16.05■□□□□ 0.16
PDF-201ENST00000288022 SCGB3A1Q96QR1 104 aa16.05■□□□□ 0.16
PDF-201ENST00000288022 AMELXQ99217 191 aa16.05■□□□□ 0.16
PDF-201ENST00000288022 TIMM17AQ99595 171 aa16.05■□□□□ 0.16
PDF-201ENST00000288022 IGKV2-24A0A0C4DH68 120 aa16.04■□□□□ 0.16
PDF-201ENST00000288022 LINC01546A6NGU7 62 aa16.04■□□□□ 0.16
PDF-201ENST00000288022 OR10D4PQ8NGN7 298 aa16.04■□□□□ 0.16
PDF-201ENST00000288022 PKIGQ9Y2B9 76 aa16.04■□□□□ 0.16
PDF-201ENST00000288022 SPACA4Q8TDM5 124 aa16.03■□□□□ 0.16
PDF-201ENST00000288022 C2orf48Q96LS8 159 aa16.03■□□□□ 0.16
PDF-201ENST00000288022 FAT1Q14517 4588 aa16.02■□□□□ 0.16
PDF-201ENST00000288022 Q6ZRU5 148 aa16.02■□□□□ 0.16
PDF-201ENST00000288022 ERASQ7Z444 233 aa16.02■□□□□ 0.16
PDF-201ENST00000288022 LINC01549A6NIU2 74 aa16.01■□□□□ 0.15
PDF-201ENST00000288022 MAJINQ3KP22 176 aa16.01■□□□□ 0.15
PDF-201ENST00000288022 A0A087WYN8 130 aa16■□□□□ 0.15
PDF-201ENST00000288022 A0A087WZ39 114 aa16■□□□□ 0.15
PDF-201ENST00000288022 A0A096LNI7 61 aa16■□□□□ 0.15
PDF-201ENST00000288022 CBLN2Q8IUK8 224 aa16■□□□□ 0.15
PDF-201ENST00000288022 C18orf32Q8TCD1 76 aa16■□□□□ 0.15
PDF-201ENST00000288022 YPEL4Q96NS1 127 aa16■□□□□ 0.15
PDF-201ENST00000288022 SEC11AP67812 179 aa15.96■□□□□ 0.15
PDF-201ENST00000288022 LOC107984640A0A0U1RRK4 108 aa15.95■□□□□ 0.14
PDF-201ENST00000288022 LINC00614P0C842 121 aa15.95■□□□□ 0.14
PDF-201ENST00000288022 FAM19A3Q7Z5A8 133 aa15.95■□□□□ 0.14
PDF-201ENST00000288022 GEMIN7Q9H840 131 aaKnown RBP15.95■□□□□ 0.14
PDF-201ENST00000288022 LINC00474Q9P2X8 69 aa15.95■□□□□ 0.14
PDF-201ENST00000288022 F8WDY8 70 aa15.94■□□□□ 0.14
PDF-201ENST00000288022 NDUFA1O15239 70 aa15.94■□□□□ 0.14
PDF-201ENST00000288022 HERVK_113P63121 156 aa15.94■□□□□ 0.14
PDF-201ENST00000288022 STPG4Q8N801 248 aa15.94■□□□□ 0.14
PDF-201ENST00000288022 PLAC8Q9NZF1 115 aa15.94■□□□□ 0.14
PDF-201ENST00000288022 RAB5BP61020 215 aa15.93■□□□□ 0.14
PDF-201ENST00000288022 RPL37AP61513 92 aaKnown RBP15.93■□□□□ 0.14
PDF-201ENST00000288022 GAGE2BQ13066 116 aa15.93■□□□□ 0.14
PDF-201ENST00000288022 LINC01561Q8N1V8 128 aa15.93■□□□□ 0.14
PDF-201ENST00000288022 URB1-AS1Q96HZ7 61 aa15.93■□□□□ 0.14
PDF-201ENST00000288022 A0A0J9YXV3 536 aa15.92■□□□□ 0.14
PDF-201ENST00000288022 VPS13BQ7Z7G8 4022 aa15.92■□□□□ 0.14
PDF-201ENST00000288022 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.91■□□□□ 0.14
PDF-201ENST00000288022 RPL18AQ02543 176 aaKnown RBP15.91■□□□□ 0.14
PDF-201ENST00000288022 MRPL35Q9NZE8 188 aaKnown RBP15.91■□□□□ 0.14
PDF-201ENST00000288022 PTTG1IPP53801 180 aa15.9■□□□□ 0.14
PDF-201ENST00000288022 PMCHL1Q16048 86 aa15.9■□□□□ 0.14
PDF-201ENST00000288022 RNF151Q2KHN1 245 aa15.9■□□□□ 0.14
PDF-201ENST00000288022 UNQ6190/PRO20217Q6UXQ8 127 aa15.9■□□□□ 0.14
PDF-201ENST00000288022 PACRGQ96M98 296 aaPredicted RBP15.9■□□□□ 0.14
PDF-201ENST00000288022 CDKN2A-AS1Q9UH64 79 aa15.9■□□□□ 0.14
PDF-201ENST00000288022 SRRM2Q9UQ35 2752 aaKnown RBP15.89■□□□□ 0.13
PDF-201ENST00000288022 HBDP02042 147 aa15.89■□□□□ 0.13
PDF-201ENST00000288022 KIAA0087Q14695 138 aa15.89■□□□□ 0.13
PDF-201ENST00000288022 C10orf25Q5T742 122 aa15.89■□□□□ 0.13
PDF-201ENST00000288022 CST9LQ9H4G1 147 aa15.89■□□□□ 0.13
PDF-201ENST00000288022 TOMM7Q9P0U1 55 aa15.89■□□□□ 0.13
PDF-201ENST00000288022 A0A096LNJ9 63 aa15.88■□□□□ 0.13
PDF-201ENST00000288022 PRSS2P07478 247 aa15.88■□□□□ 0.13
PDF-201ENST00000288022 PMVKQ15126 192 aa15.88■□□□□ 0.13
PDF-201ENST00000288022 KRTAP10-4P60372 401 aaPredicted RBP15.87■□□□□ 0.13
PDF-201ENST00000288022 LINC00469Q8N7U9 141 aa15.87■□□□□ 0.13
PDF-201ENST00000288022 TINCRA0A1B0GVN0 87 aa15.86■□□□□ 0.13
PDF-201ENST00000288022 NDUFA6P56556 154 aa15.86■□□□□ 0.13
PDF-201ENST00000288022 C2orf82Q6UX34 121 aa15.86■□□□□ 0.13
PDF-201ENST00000288022 C7orf33Q8WU49 177 aa15.86■□□□□ 0.13
PDF-201ENST00000288022 C6orf48Q9UBA6 75 aa15.85■□□□□ 0.13
PDF-201ENST00000288022 C6orf226Q5I0X4 101 aa15.84■□□□□ 0.13
PDF-201ENST00000288022 CKS1BP61024 79 aa15.83■□□□□ 0.12
PDF-201ENST00000288022 TRGC2P03986 189 aa15.82■□□□□ 0.12
PDF-201ENST00000288022 PDZD11Q5EBL8 140 aa15.82■□□□□ 0.12
PDF-201ENST00000288022 Q8IZM0 81 aa15.82■□□□□ 0.12
PDF-201ENST00000288022 TRBV30A0A0K0K1B3 111 aa15.81■□□□□ 0.12
PDF-201ENST00000288022 CHCHD1Q96BP2 118 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms