RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
TRAM1-201ENST00000262213 LOC100131303A0A0U1RQF7 123 aa12.42□□□□□ -0.42
TRAM1-201ENST00000262213 PRB1P04280 392 aa12.42□□□□□ -0.42
TRAM1-201ENST00000262213 GAGE2AQ6NT46 116 aa12.42□□□□□ -0.42
TRAM1-201ENST00000262213 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
TRAM1-201ENST00000262213 COPS9Q8WXC6 57 aa12.42□□□□□ -0.42
TRAM1-201ENST00000262213 MIR7-3HGQ8N6C7 128 aa12.41□□□□□ -0.42
TRAM1-201ENST00000262213 NF1P21359 2839 aa12.4□□□□□ -0.42
TRAM1-201ENST00000262213 IGHV4-31P0DP07 118 aa12.4□□□□□ -0.42
TRAM1-201ENST00000262213 NIPBLQ6KC79 2804 aaeCLIP12.4□□□□□ -0.42
TRAM1-201ENST00000262213 CRPP02741 224 aa12.39□□□□□ -0.43
TRAM1-201ENST00000262213 TRACP01848 142 aa12.39□□□□□ -0.43
TRAM1-201ENST00000262213 ACYP1P07311 99 aa12.39□□□□□ -0.43
TRAM1-201ENST00000262213 TMEM243Q9BU79 118 aa12.39□□□□□ -0.43
TRAM1-201ENST00000262213 C22orf24Q9Y442 160 aa12.39□□□□□ -0.43
TRAM1-201ENST00000262213 LINC00158P58513 81 aa12.38□□□□□ -0.43
TRAM1-201ENST00000262213 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
TRAM1-201ENST00000262213 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
TRAM1-201ENST00000262213 HERV-K104P63124 156 aa12.38□□□□□ -0.43
TRAM1-201ENST00000262213 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
TRAM1-201ENST00000262213 CR1P17927 2039 aa12.37□□□□□ -0.43
TRAM1-201ENST00000262213 HIST2H2BCQ6DN03 193 aa12.37□□□□□ -0.43
TRAM1-201ENST00000262213 ZNF843Q8N446 348 aa12.37□□□□□ -0.43
TRAM1-201ENST00000262213 SND1-IT1Q9HBX3 110 aa12.37□□□□□ -0.43
TRAM1-201ENST00000262213 CSDC2Q9Y534 153 aaKnown RBP12.37□□□□□ -0.43
TRAM1-201ENST00000262213 CCDC168Q8NDH2 2452 aa12.36□□□□□ -0.43
TRAM1-201ENST00000262213 FSHBP01225 129 aa12.36□□□□□ -0.43
TRAM1-201ENST00000262213 LINC00643Q86TS7 51 aa12.36□□□□□ -0.43
TRAM1-201ENST00000262213 COX7B2Q8TF08 81 aa12.36□□□□□ -0.43
TRAM1-201ENST00000262213 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
TRAM1-201ENST00000262213 C11orf68Q9H3H3 251 aaKnown RBP12.36□□□□□ -0.43
TRAM1-201ENST00000262213 TRBV10-1A0A0K0K1A3 114 aa12.36□□□□□ -0.43
TRAM1-201ENST00000262213 SETXQ7Z333 2677 aaKnown RBP12.36□□□□□ -0.43
TRAM1-201ENST00000262213 PFN2P35080 140 aa12.35□□□□□ -0.43
TRAM1-201ENST00000262213 A0A087WYN8 130 aa12.35□□□□□ -0.43
TRAM1-201ENST00000262213 ATP5G1P05496 136 aa12.35□□□□□ -0.43
TRAM1-201ENST00000262213 MALP21145 153 aa12.35□□□□□ -0.43
TRAM1-201ENST00000262213 FAM19A3Q7Z5A8 133 aa12.35□□□□□ -0.43
TRAM1-201ENST00000262213 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
TRAM1-201ENST00000262213 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
TRAM1-201ENST00000262213 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
TRAM1-201ENST00000262213 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
TRAM1-201ENST00000262213 IGKV2D-28P01615 120 aa12.34□□□□□ -0.43
TRAM1-201ENST00000262213 KRTAP10-9P60411 292 aa12.34□□□□□ -0.43
TRAM1-201ENST00000262213 ZNF462Q96JM2 2506 aa12.34□□□□□ -0.43
TRAM1-201ENST00000262213 C9orf129Q5T035 196 aaKnown RBP12.34□□□□□ -0.43
TRAM1-201ENST00000262213 DNAL4O96015 105 aa12.33□□□□□ -0.44
TRAM1-201ENST00000262213 AKAP9Q99996 3911 aa12.33□□□□□ -0.44
TRAM1-201ENST00000262213 C5orf38Q86SI9 138 aa12.33□□□□□ -0.44
TRAM1-201ENST00000262213 SMIM11BQ8TCY0 68 aa12.33□□□□□ -0.44
TRAM1-201ENST00000262213 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
TRAM1-201ENST00000262213 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
TRAM1-201ENST00000262213 C14orf132Q9NPU4 83 aa12.32□□□□□ -0.44
TRAM1-201ENST00000262213 OR13C6PQ8NH95 151 aa12.32□□□□□ -0.44
TRAM1-201ENST00000262213 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
TRAM1-201ENST00000262213 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
TRAM1-201ENST00000262213 C9orf153Q5TBE3 101 aa12.31□□□□□ -0.44
TRAM1-201ENST00000262213 INAFM2P0DMQ5 153 aa12.3□□□□□ -0.44
TRAM1-201ENST00000262213 IMUPQ9GZP8 106 aa12.3□□□□□ -0.44
TRAM1-201ENST00000262213 CCL18P55774 89 aa12.3□□□□□ -0.44
TRAM1-201ENST00000262213 PAX4O43316 350 aa12.3□□□□□ -0.44
TRAM1-201ENST00000262213 SLPIP03973 132 aa12.3□□□□□ -0.44
TRAM1-201ENST00000262213 CCL24O00175 119 aa12.29□□□□□ -0.44
TRAM1-201ENST00000262213 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
TRAM1-201ENST00000262213 LECT2O14960 151 aa12.28□□□□□ -0.44
TRAM1-201ENST00000262213 FAM110AQ9BQ89 295 aa12.28□□□□□ -0.44
TRAM1-201ENST00000262213 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
TRAM1-201ENST00000262213 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.44
TRAM1-201ENST00000262213 PF4P02776 101 aa12.26□□□□□ -0.45
TRAM1-201ENST00000262213 GIG44P09565 113 aaPredicted RBP12.26□□□□□ -0.45
TRAM1-201ENST00000262213 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
TRAM1-201ENST00000262213 KLK5Q9Y337 293 aaPredicted RBP12.26□□□□□ -0.45
TRAM1-201ENST00000262213 NCR3O14931 201 aa12.25□□□□□ -0.45
TRAM1-201ENST00000262213 PLAC8L1A1L4L8 177 aa12.25□□□□□ -0.45
TRAM1-201ENST00000262213 CLPSL2Q6UWE3 100 aa12.24□□□□□ -0.45
TRAM1-201ENST00000262213 ZNF469Q96JG9 3925 aaPredicted RBP12.24□□□□□ -0.45
TRAM1-201ENST00000262213 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
TRAM1-201ENST00000262213 TRAV25A0A0B4J276 109 aa12.24□□□□□ -0.45
TRAM1-201ENST00000262213 IGHV3OR16-9A0A0B4J2B5 98 aa12.23□□□□□ -0.45
TRAM1-201ENST00000262213 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
TRAM1-201ENST00000262213 TMEM126AQ9H061 195 aa12.23□□□□□ -0.45
TRAM1-201ENST00000262213 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
TRAM1-201ENST00000262213 ITPR3Q14573 2671 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 DEFB130BP0DP73 79 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 DEFB130AP0DP74 79 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 XCL1P47992 114 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 C6orf226Q5I0X4 101 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 LRRC75A-AS1Q8N1F1 130 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 MTORP42345 2549 aa12.22□□□□□ -0.45
TRAM1-201ENST00000262213 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.45
TRAM1-201ENST00000262213 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.45
TRAM1-201ENST00000262213 UQCRQO14949 82 aa12.21□□□□□ -0.45
TRAM1-201ENST00000262213 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.46
TRAM1-201ENST00000262213 LINC00846Q9NV44 126 aa12.21□□□□□ -0.46
TRAM1-201ENST00000262213 A0A087WVE0 104 aa12.2□□□□□ -0.46
TRAM1-201ENST00000262213 CXCL5P42830 114 aa12.2□□□□□ -0.46
TRAM1-201ENST00000262213 OVOL2Q9BRP0 275 aa12.2□□□□□ -0.46
TRAM1-201ENST00000262213 A0A096LPF7 62 aa12.19□□□□□ -0.46
TRAM1-201ENST00000262213 PRR3P79522 188 aaKnown RBP12.19□□□□□ -0.46
TRAM1-201ENST00000262213 ACANP16112 2415 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms