RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
CLPP-201ENST00000245816 SPANXA1Q9NS26 97 aa10.46□□□□□ -0.73
CLPP-201ENST00000245816 HMCN2Q8NDA2 5059 aa10.46□□□□□ -0.74
CLPP-201ENST00000245816 IGKV3OR2-268A0A0C4DH90 116 aa10.45□□□□□ -0.74
CLPP-201ENST00000245816 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
CLPP-201ENST00000245816 LINC00528Q8N1L1 170 aa10.45□□□□□ -0.74
CLPP-201ENST00000245816 CHCHD10Q8WYQ3 142 aaPredicted RBP10.45□□□□□ -0.74
CLPP-201ENST00000245816 HSBP1O75506 76 aa10.44□□□□□ -0.74
CLPP-201ENST00000245816 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
CLPP-201ENST00000245816 PMCHL1Q16048 86 aa10.44□□□□□ -0.74
CLPP-201ENST00000245816 C9orf163Q8N9P6 203 aa10.44□□□□□ -0.74
CLPP-201ENST00000245816 TOMM6Q96B49 74 aa10.44□□□□□ -0.74
CLPP-201ENST00000245816 SCGB3A1Q96QR1 104 aa10.44□□□□□ -0.74
CLPP-201ENST00000245816 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
CLPP-201ENST00000245816 LINC01549A6NIU2 74 aa10.43□□□□□ -0.74
CLPP-201ENST00000245816 SERF1AO75920 110 aa10.43□□□□□ -0.74
CLPP-201ENST00000245816 SS18Q15532 418 aa10.43□□□□□ -0.74
CLPP-201ENST00000245816 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
CLPP-201ENST00000245816 OPRPNQ99935 248 aaPredicted RBP10.43□□□□□ -0.74
CLPP-201ENST00000245816 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
CLPP-201ENST00000245816 HBDP02042 147 aa10.42□□□□□ -0.74
CLPP-201ENST00000245816 NDUFA6P56556 154 aa10.42□□□□□ -0.74
CLPP-201ENST00000245816 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
CLPP-201ENST00000245816 Q6ZUT4 128 aa10.42□□□□□ -0.74
CLPP-201ENST00000245816 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
CLPP-201ENST00000245816 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 PANO1I0J062 215 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
CLPP-201ENST00000245816 FOXI1Q12951 378 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 Q6ZN92 141 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 ERASQ7Z444 233 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
CLPP-201ENST00000245816 IGLV4-3A0A075B6K6 122 aa10.4□□□□□ -0.74
CLPP-201ENST00000245816 hDV102S1A0JD36 115 aa10.4□□□□□ -0.74
CLPP-201ENST00000245816 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
CLPP-201ENST00000245816 FAM19A2Q8N3H0 131 aa10.4□□□□□ -0.74
CLPP-201ENST00000245816 TMEM141Q96I45 108 aa10.4□□□□□ -0.74
CLPP-201ENST00000245816 VCX2Q9H322 139 aa10.4□□□□□ -0.74
CLPP-201ENST00000245816 A0A096LNJ9 63 aa10.39□□□□□ -0.75
CLPP-201ENST00000245816 NUPR1O60356 82 aa10.39□□□□□ -0.75
CLPP-201ENST00000245816 C15orf56Q8N910 161 aa10.39□□□□□ -0.75
CLPP-201ENST00000245816 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
CLPP-201ENST00000245816 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
CLPP-201ENST00000245816 TRAV13-1A0A0B4J241 112 aa10.38□□□□□ -0.75
CLPP-201ENST00000245816 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
CLPP-201ENST00000245816 NPSP0C0P6 89 aa10.38□□□□□ -0.75
CLPP-201ENST00000245816 LINC00310P59036 64 aa10.38□□□□□ -0.75
CLPP-201ENST00000245816 TEX43Q6ZNM6 134 aa10.38□□□□□ -0.75
CLPP-201ENST00000245816 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 IFITM10A6NMD0 228 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 ATP5LO75964 103 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 XCL1P47992 114 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
CLPP-201ENST00000245816 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
CLPP-201ENST00000245816 HNRNPA3P51991 378 aaKnown RBP10.36□□□□□ -0.75
CLPP-201ENST00000245816 ZC2HC1BQ5TFG8 222 aa10.36□□□□□ -0.75
CLPP-201ENST00000245816 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
CLPP-201ENST00000245816 IGHV3-64A0A075B6Q5 118 aa10.35□□□□□ -0.75
CLPP-201ENST00000245816 SLPIP03973 132 aa10.35□□□□□ -0.75
CLPP-201ENST00000245816 PLA2G1BP04054 148 aaKnown RBP10.35□□□□□ -0.75
CLPP-201ENST00000245816 FABP4P15090 132 aa10.35□□□□□ -0.75
CLPP-201ENST00000245816 COA6Q5JTJ3 125 aaKnown RBP10.35□□□□□ -0.75
CLPP-201ENST00000245816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.35□□□□□ -0.75
CLPP-201ENST00000245816 S100A6P06703 90 aa10.34□□□□□ -0.75
CLPP-201ENST00000245816 AMELXQ99217 191 aa10.34□□□□□ -0.75
CLPP-201ENST00000245816 COX7A2LO14548 114 aa10.33□□□□□ -0.76
CLPP-201ENST00000245816 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
CLPP-201ENST00000245816 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
CLPP-201ENST00000245816 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
CLPP-201ENST00000245816 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
CLPP-201ENST00000245816 CIRBPQ14011 172 aaKnown RBP10.32□□□□□ -0.76
CLPP-201ENST00000245816 PMVKQ15126 192 aa10.32□□□□□ -0.76
CLPP-201ENST00000245816 LINC00173Q6ZV60 143 aa10.32□□□□□ -0.76
CLPP-201ENST00000245816 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
CLPP-201ENST00000245816 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
CLPP-201ENST00000245816 APOMO95445 188 aa10.3□□□□□ -0.76
CLPP-201ENST00000245816 MALP21145 153 aa10.3□□□□□ -0.76
CLPP-201ENST00000245816 UBE2D1P51668 147 aa10.3□□□□□ -0.76
CLPP-201ENST00000245816 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
CLPP-201ENST00000245816 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
CLPP-201ENST00000245816 J3QL48 77 aa10.29□□□□□ -0.76
CLPP-201ENST00000245816 UBR4Q5T4S7 5183 aa10.29□□□□□ -0.76
CLPP-201ENST00000245816 F8WDY8 70 aa10.28□□□□□ -0.76
CLPP-201ENST00000245816 H0Y8G0 127 aa10.28□□□□□ -0.76
CLPP-201ENST00000245816 SEC11AP67812 179 aa10.28□□□□□ -0.76
CLPP-201ENST00000245816 LINC00242Q5T6M2 205 aa10.28□□□□□ -0.76
CLPP-201ENST00000245816 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
CLPP-201ENST00000245816 TNXBP22105 4242 aa10.28□□□□□ -0.76
CLPP-201ENST00000245816 A0A0J9YXV3 536 aa10.27□□□□□ -0.77
CLPP-201ENST00000245816 S100A2P29034 98 aa10.27□□□□□ -0.77
CLPP-201ENST00000245816 C5orf38Q86SI9 138 aa10.27□□□□□ -0.77
CLPP-201ENST00000245816 OR10D4PQ8NGN7 298 aa10.27□□□□□ -0.77
CLPP-201ENST00000245816 C2orf48Q96LS8 159 aa10.27□□□□□ -0.77
CLPP-201ENST00000245816 MAP1LC3CQ9BXW4 147 aa10.27□□□□□ -0.77
CLPP-201ENST00000245816 COX6A2Q02221 97 aa10.26□□□□□ -0.77
CLPP-201ENST00000245816 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
CLPP-201ENST00000245816 LINC00474Q9P2X8 69 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms