RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 HTN3P15516 51 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 WFDC10AQ9H1F0 79 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 ZNF580Q9UK33 172 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 LECT2O14960 151 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 ODF3Q96PU9 254 aa8.53□□□□□ -1.04
SOX9-201ENST00000245479 A6NDX4 124 aa8.52□□□□□ -1.04
SOX9-201ENST00000245479 PRORYQ9H606 182 aa8.52□□□□□ -1.04
SOX9-201ENST00000245479 CRYGDP07320 174 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 DEFB130BP0DP73 79 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 DEFB130AP0DP74 79 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 COX7CP15954 63 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 FAM240AA0A1B0GVK7 77 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 M0QY20 66 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 MALP21145 153 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 RBM3P98179 157 aaKnown RBP8.52□□□□□ -1.05
SOX9-201ENST00000245479 GPHB5Q86YW7 130 aa8.52□□□□□ -1.05
SOX9-201ENST00000245479 INSP01308 110 aa8.51□□□□□ -1.05
SOX9-201ENST00000245479 APCP25054 2843 aa8.51□□□□□ -1.05
SOX9-201ENST00000245479 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 SMIM9A6NGZ8 99 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 LINC00308Q8TCZ7 52 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 DEFB4AO15263 64 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 PLA2G2AP14555 144 aa8.5□□□□□ -1.05
SOX9-201ENST00000245479 CLPSL2Q6UWE3 100 aa8.49□□□□□ -1.05
SOX9-201ENST00000245479 H0YGX0 51 aa8.49□□□□□ -1.05
SOX9-201ENST00000245479 GHRHP01286 108 aa8.49□□□□□ -1.05
SOX9-201ENST00000245479 FAM19A5Q7Z5A7 132 aaPredicted RBP8.49□□□□□ -1.05
SOX9-201ENST00000245479 C20orf197Q8N268 126 aa8.49□□□□□ -1.05
SOX9-201ENST00000245479 SMR3AQ99954 134 aa8.49□□□□□ -1.05
SOX9-201ENST00000245479 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 TSHBP01222 138 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 ELANEP08246 267 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 TIRAPP58753 221 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 MIR7-3HGQ8N6C7 128 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 PIK3CD-AS1Q5SR53 167 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 U3KQE9 123 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 UNC79Q9P2D8 2635 aa8.48□□□□□ -1.05
SOX9-201ENST00000245479 NHLRC4P0CG21 123 aaPredicted RBP8.48□□□□□ -1.05
SOX9-201ENST00000245479 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 SBSPONQ8IVN8 264 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 DSCR8Q96T75 97 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 C5orf38Q86SI9 138 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 RNF152Q8N8N0 203 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 LINC00526Q96FQ7 95 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 HIVEP1P15822 2718 aa8.47□□□□□ -1.05
SOX9-201ENST00000245479 A0A0J9YX75 114 aa8.46□□□□□ -1.05
SOX9-201ENST00000245479 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.05
SOX9-201ENST00000245479 MRAPQ8TCY5 172 aa8.46□□□□□ -1.05
SOX9-201ENST00000245479 LINC00467Q9BRT7 94 aa8.46□□□□□ -1.05
SOX9-201ENST00000245479 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.05
SOX9-201ENST00000245479 PSMB8P28062 276 aa8.46□□□□□ -1.06
SOX9-201ENST00000245479 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
SOX9-201ENST00000245479 NOP10Q9NPE3 64 aaKnown RBP8.46□□□□□ -1.06
SOX9-201ENST00000245479 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
SOX9-201ENST00000245479 TMEM258P61165 79 aa8.45□□□□□ -1.06
SOX9-201ENST00000245479 H3BUA1 57 aa8.45□□□□□ -1.06
SOX9-201ENST00000245479 PF4P02776 101 aa8.45□□□□□ -1.06
SOX9-201ENST00000245479 HRCT1Q6UXD1 115 aa8.45□□□□□ -1.06
SOX9-201ENST00000245479 DCANP1Q8TF63 244 aa8.44□□□□□ -1.06
SOX9-201ENST00000245479 SLPIP03973 132 aa8.44□□□□□ -1.06
SOX9-201ENST00000245479 F5H768 121 aa8.44□□□□□ -1.06
SOX9-201ENST00000245479 NDUFA1O15239 70 aa8.44□□□□□ -1.06
SOX9-201ENST00000245479 NCR3O14931 201 aa8.43□□□□□ -1.06
SOX9-201ENST00000245479 A0A087WVE0 104 aa8.43□□□□□ -1.06
SOX9-201ENST00000245479 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
SOX9-201ENST00000245479 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
SOX9-201ENST00000245479 STAB1Q9NY15 2570 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 TRBV7-7A0A0K0K1E9 115 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 COX7B2Q8TF08 81 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 SS18Q15532 418 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 KLLNB2CW77 178 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 CXCL5P42830 114 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
SOX9-201ENST00000245479 K7EMT4 169 aa8.41□□□□□ -1.06
SOX9-201ENST00000245479 IGHV4-31P0DP07 118 aa8.41□□□□□ -1.06
SOX9-201ENST00000245479 DEFB113Q30KQ7 82 aa8.41□□□□□ -1.06
SOX9-201ENST00000245479 A0A0U1RQV1 116 aa8.41□□□□□ -1.06
SOX9-201ENST00000245479 TIMM17BO60830 172 aa8.41□□□□□ -1.06
SOX9-201ENST00000245479 XCL1P47992 114 aa8.41□□□□□ -1.06
SOX9-201ENST00000245479 Q6ZTI0 123 aa8.4□□□□□ -1.06
SOX9-201ENST00000245479 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.06
SOX9-201ENST00000245479 K7EQG2 157 aa8.4□□□□□ -1.06
SOX9-201ENST00000245479 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.07
SOX9-201ENST00000245479 FAM236CP0DP71 79 aa8.4□□□□□ -1.07
SOX9-201ENST00000245479 CCL24O00175 119 aa8.39□□□□□ -1.07
SOX9-201ENST00000245479 ENHOQ6UWT2 76 aa8.39□□□□□ -1.07
SOX9-201ENST00000245479 Q6ZSN1 163 aa8.39□□□□□ -1.07
SOX9-201ENST00000245479 ZNF843Q8N446 348 aa8.39□□□□□ -1.07
SOX9-201ENST00000245479 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
SOX9-201ENST00000245479 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
SOX9-201ENST00000245479 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
SOX9-201ENST00000245479 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8797.1 ms