RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 COX8AP10176 69 aa12.63□□□□□ -0.39
SNX17-201ENST00000233575 KLK12Q9UKR0 248 aa12.63□□□□□ -0.39
SNX17-201ENST00000233575 IGLV5-45A0A087WSX0 123 aa12.62□□□□□ -0.39
SNX17-201ENST00000233575 E9PLD3 99 aa12.62□□□□□ -0.39
SNX17-201ENST00000233575 REG3AQ06141 175 aa12.62□□□□□ -0.39
SNX17-201ENST00000233575 SLC25A34Q6PIV7 304 aa12.62□□□□□ -0.39
SNX17-201ENST00000233575 TRAV8-3A0A0A6YYJ7 113 aa12.62□□□□□ -0.39
SNX17-201ENST00000233575 HERVK_113P63121 156 aa12.62□□□□□ -0.39
SNX17-201ENST00000233575 TGP01266 2768 aa12.61□□□□□ -0.39
SNX17-201ENST00000233575 SPINK8P0C7L1 97 aa12.61□□□□□ -0.39
SNX17-201ENST00000233575 APLNQ9ULZ1 77 aa12.61□□□□□ -0.39
SNX17-201ENST00000233575 TSPEAR-AS2P59090 65 aa12.61□□□□□ -0.39
SNX17-201ENST00000233575 MAPKAPK5-AS1Q8N8E1 139 aa12.61□□□□□ -0.39
SNX17-201ENST00000233575 IGLV10-54A0A075B6I4 117 aa12.6□□□□□ -0.39
SNX17-201ENST00000233575 CCL18P55774 89 aa12.6□□□□□ -0.39
SNX17-201ENST00000233575 SEC11AP67812 179 aa12.6□□□□□ -0.39
SNX17-201ENST00000233575 HNRNPA3P51991 378 aaKnown RBP12.59□□□□□ -0.39
SNX17-201ENST00000233575 HERVK_113P61574 105 aa12.59□□□□□ -0.39
SNX17-201ENST00000233575 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
SNX17-201ENST00000233575 CCL25O15444 150 aa12.59□□□□□ -0.39
SNX17-201ENST00000233575 XCL1P47992 114 aa12.59□□□□□ -0.39
SNX17-201ENST00000233575 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
SNX17-201ENST00000233575 NUPR2A6NF83 97 aa12.58□□□□□ -0.4
SNX17-201ENST00000233575 BOD1L2Q8IYS8 172 aa12.58□□□□□ -0.4
SNX17-201ENST00000233575 PRR34Q9NV39 138 aa12.58□□□□□ -0.4
SNX17-201ENST00000233575 TENM2Q9NT68 2774 aa12.58□□□□□ -0.4
SNX17-201ENST00000233575 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
SNX17-201ENST00000233575 DNAH1Q9P2D7 4330 aa12.57□□□□□ -0.4
SNX17-201ENST00000233575 SS18Q15532 418 aa12.57□□□□□ -0.4
SNX17-201ENST00000233575 LINC01556Q5JQF7 62 aa12.57□□□□□ -0.4
SNX17-201ENST00000233575 COL5A1-AS1Q5SY13 56 aa12.57□□□□□ -0.4
SNX17-201ENST00000233575 ZFAND6Q6FIF0 208 aa12.56□□□□□ -0.4
SNX17-201ENST00000233575 UBE2WQ96B02 151 aa12.56□□□□□ -0.4
SNX17-201ENST00000233575 IGHV1-58A0A0C4DH39 117 aa12.55□□□□□ -0.4
SNX17-201ENST00000233575 H3BRM9 83 aa12.55□□□□□ -0.4
SNX17-201ENST00000233575 DNAH10OSP0CZ25 163 aa12.55□□□□□ -0.4
SNX17-201ENST00000233575 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
SNX17-201ENST00000233575 SMIM1B2RUZ4 78 aa12.55□□□□□ -0.4
SNX17-201ENST00000233575 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
SNX17-201ENST00000233575 J3QQQ9 107 aa12.54□□□□□ -0.4
SNX17-201ENST00000233575 LEPROTO15243 131 aa12.54□□□□□ -0.4
SNX17-201ENST00000233575 SIVA1O15304 175 aa12.54□□□□□ -0.4
SNX17-201ENST00000233575 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
SNX17-201ENST00000233575 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
SNX17-201ENST00000233575 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
SNX17-201ENST00000233575 CRPP02741 224 aa12.52□□□□□ -0.4
SNX17-201ENST00000233575 IGLV5-39A0A0G2JS06 123 aa12.52□□□□□ -0.41
SNX17-201ENST00000233575 ZNF815PA8K554 130 aa12.52□□□□□ -0.41
SNX17-201ENST00000233575 A0A087WZ39 114 aa12.51□□□□□ -0.41
SNX17-201ENST00000233575 MYMXA0A1B0GTQ4 84 aa12.51□□□□□ -0.41
SNX17-201ENST00000233575 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
SNX17-201ENST00000233575 CD164L2Q6UWJ8 174 aa12.5□□□□□ -0.41
SNX17-201ENST00000233575 ORAOV1Q8WV07 137 aa12.5□□□□□ -0.41
SNX17-201ENST00000233575 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
SNX17-201ENST00000233575 Q9H8V8 135 aa12.5□□□□□ -0.41
SNX17-201ENST00000233575 FOXI1Q12951 378 aa12.49□□□□□ -0.41
SNX17-201ENST00000233575 GAGE12HA6NDE8 117 aa12.49□□□□□ -0.41
SNX17-201ENST00000233575 K7EP13 123 aa12.49□□□□□ -0.41
SNX17-201ENST00000233575 UBE2DNLQ8IWF7 75 aa12.49□□□□□ -0.41
SNX17-201ENST00000233575 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
SNX17-201ENST00000233575 MIAQ16674 131 aa12.47□□□□□ -0.41
SNX17-201ENST00000233575 BATFQ16520 125 aa12.47□□□□□ -0.41
SNX17-201ENST00000233575 MUC7Q8TAX7 377 aa12.47□□□□□ -0.41
SNX17-201ENST00000233575 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
SNX17-201ENST00000233575 Q9HAA7 133 aa12.46□□□□□ -0.41
SNX17-201ENST00000233575 NDUFA12Q9UI09 145 aa12.46□□□□□ -0.41
SNX17-201ENST00000233575 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
SNX17-201ENST00000233575 COX7A2LO14548 114 aa12.45□□□□□ -0.42
SNX17-201ENST00000233575 KRTAP26-1Q6PEX3 210 aa12.45□□□□□ -0.42
SNX17-201ENST00000233575 TOMM7Q9P0U1 55 aa12.45□□□□□ -0.42
SNX17-201ENST00000233575 HINT1P49773 126 aaPredicted RBP12.45□□□□□ -0.42
SNX17-201ENST00000233575 PTTG1IPP53801 180 aa12.44□□□□□ -0.42
SNX17-201ENST00000233575 KRTAP1-5Q9BYS1 174 aa12.44□□□□□ -0.42
SNX17-201ENST00000233575 IBA57-AS1B1ANH7 110 aa12.44□□□□□ -0.42
SNX17-201ENST00000233575 SCGB1D4Q6XE38 83 aa12.44□□□□□ -0.42
SNX17-201ENST00000233575 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
SNX17-201ENST00000233575 COX7B2Q8TF08 81 aa12.43□□□□□ -0.42
SNX17-201ENST00000233575 DNAH10Q8IVF4 4471 aa12.42□□□□□ -0.42
SNX17-201ENST00000233575 IGKV2D-24A0A075B6R9 120 aa12.42□□□□□ -0.42
SNX17-201ENST00000233575 UBE2V1Q13404 147 aa12.42□□□□□ -0.42
SNX17-201ENST00000233575 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
SNX17-201ENST00000233575 MALP21145 153 aa12.42□□□□□ -0.42
SNX17-201ENST00000233575 C1orf43Q9BWL3 253 aa12.42□□□□□ -0.42
SNX17-201ENST00000233575 A0A0J9YXY3 114 aa12.41□□□□□ -0.42
SNX17-201ENST00000233575 NDUFA1O15239 70 aa12.4□□□□□ -0.42
SNX17-201ENST00000233575 LINC01561Q8N1V8 128 aa12.4□□□□□ -0.42
SNX17-201ENST00000233575 ZNF625Q96I27 306 aaPredicted RBP12.4□□□□□ -0.42
SNX17-201ENST00000233575 BVES-AS1Q5T3Y7 98 aa12.39□□□□□ -0.43
SNX17-201ENST00000233575 HSD52Q0P140 79 aa12.38□□□□□ -0.43
SNX17-201ENST00000233575 KIAA0087Q14695 138 aa12.38□□□□□ -0.43
SNX17-201ENST00000233575 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
SNX17-201ENST00000233575 COX11Q9Y6N1 276 aa12.38□□□□□ -0.43
SNX17-201ENST00000233575 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
SNX17-201ENST00000233575 CASC10Q5T4H9 136 aa12.37□□□□□ -0.43
SNX17-201ENST00000233575 Q8IZM0 81 aa12.37□□□□□ -0.43
SNX17-201ENST00000233575 C6orf226Q5I0X4 101 aa12.36□□□□□ -0.43
SNX17-201ENST00000233575 LITAFQ99732 161 aa12.35□□□□□ -0.43
SNX17-201ENST00000233575 PRSS2P07478 247 aa12.35□□□□□ -0.43
SNX17-201ENST00000233575 ADAMTSL4-AS1Q5T5F5 129 aa12.35□□□□□ -0.43
SNX17-201ENST00000233575 C6orf223Q8N319 242 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms