RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 LINC01006Q8NI28 216 aa11.91□□□□□ -0.5
EFNB3-201ENST00000226091 FSHBP01225 129 aa11.91□□□□□ -0.5
EFNB3-201ENST00000226091 CLEC2BQ92478 149 aa11.91□□□□□ -0.5
EFNB3-201ENST00000226091 FBN1P35555 2871 aaKnown RBP11.91□□□□□ -0.5
EFNB3-201ENST00000226091 UBE2D4Q9Y2X8 147 aa11.9□□□□□ -0.5
EFNB3-201ENST00000226091 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
EFNB3-201ENST00000226091 TRGV4A0A0C4DH28 118 aa11.89□□□□□ -0.51
EFNB3-201ENST00000226091 Q9H8V8 135 aa11.89□□□□□ -0.51
EFNB3-201ENST00000226091 FAM236AA0A1B0GUQ0 79 aa11.89□□□□□ -0.51
EFNB3-201ENST00000226091 FAM236BA0A1B0GV22 79 aa11.89□□□□□ -0.51
EFNB3-201ENST00000226091 LINC01620Q4KN68 170 aa11.89□□□□□ -0.51
EFNB3-201ENST00000226091 UBE2WQ96B02 151 aa11.89□□□□□ -0.51
EFNB3-201ENST00000226091 RS1O15537 224 aa11.88□□□□□ -0.51
EFNB3-201ENST00000226091 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
EFNB3-201ENST00000226091 UBE2L6O14933 153 aa11.88□□□□□ -0.51
EFNB3-201ENST00000226091 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
EFNB3-201ENST00000226091 MRPS36P82909 103 aaKnown RBP11.87□□□□□ -0.51
EFNB3-201ENST00000226091 LITAFQ99732 161 aa11.87□□□□□ -0.51
EFNB3-201ENST00000226091 C9orf153Q5TBE3 101 aa11.87□□□□□ -0.51
EFNB3-201ENST00000226091 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
EFNB3-201ENST00000226091 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
EFNB3-201ENST00000226091 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
EFNB3-201ENST00000226091 A0A0B4J2C4 111 aa11.86□□□□□ -0.51
EFNB3-201ENST00000226091 PYGO1Q9Y3Y4 419 aa11.86□□□□□ -0.51
EFNB3-201ENST00000226091 PF4P02776 101 aa11.85□□□□□ -0.51
EFNB3-201ENST00000226091 IGHV1-58A0A0C4DH39 117 aa11.85□□□□□ -0.51
EFNB3-201ENST00000226091 ATXN8Q156A1 80 aa11.85□□□□□ -0.51
EFNB3-201ENST00000226091 PRIMA1Q86XR5 153 aa11.85□□□□□ -0.51
EFNB3-201ENST00000226091 NTM-AS1Q6ZSK4 140 aa11.84□□□□□ -0.51
EFNB3-201ENST00000226091 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
EFNB3-201ENST00000226091 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
EFNB3-201ENST00000226091 TRIAP1O43715 76 aa11.84□□□□□ -0.51
EFNB3-201ENST00000226091 SPATA3Q8NHX4 192 aa11.84□□□□□ -0.51
EFNB3-201ENST00000226091 TMEM101Q96IK0 257 aa11.84□□□□□ -0.51
EFNB3-201ENST00000226091 HTN3P15516 51 aa11.83□□□□□ -0.52
EFNB3-201ENST00000226091 PIK3CD-AS1Q5SR53 167 aa11.83□□□□□ -0.52
EFNB3-201ENST00000226091 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
EFNB3-201ENST00000226091 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
EFNB3-201ENST00000226091 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
EFNB3-201ENST00000226091 PFN2P35080 140 aa11.81□□□□□ -0.52
EFNB3-201ENST00000226091 K7EQD1 137 aa11.81□□□□□ -0.52
EFNB3-201ENST00000226091 EDA2RQ9HAV5 297 aa11.81□□□□□ -0.52
EFNB3-201ENST00000226091 LINC00242Q5T6M2 205 aa11.8□□□□□ -0.52
EFNB3-201ENST00000226091 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
EFNB3-201ENST00000226091 A8MTW9 85 aa11.78□□□□□ -0.52
EFNB3-201ENST00000226091 Q8N2B8 174 aa11.78□□□□□ -0.52
EFNB3-201ENST00000226091 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
EFNB3-201ENST00000226091 IGLV10-54A0A075B6I4 117 aa11.78□□□□□ -0.52
EFNB3-201ENST00000226091 CSDC2Q9Y534 153 aaKnown RBP11.78□□□□□ -0.52
EFNB3-201ENST00000226091 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.53
EFNB3-201ENST00000226091 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.53
EFNB3-201ENST00000226091 MIAQ16674 131 aa11.77□□□□□ -0.53
EFNB3-201ENST00000226091 ICOSQ9Y6W8 199 aa11.77□□□□□ -0.53
EFNB3-201ENST00000226091 IGLV4-60A0A075B6I1 120 aa11.77□□□□□ -0.53
EFNB3-201ENST00000226091 TRBV30A0A0K0K1B3 111 aa11.77□□□□□ -0.53
EFNB3-201ENST00000226091 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
EFNB3-201ENST00000226091 XCL1P47992 114 aa11.76□□□□□ -0.53
EFNB3-201ENST00000226091 HERVK_113P63121 156 aa11.76□□□□□ -0.53
EFNB3-201ENST00000226091 H7C423 109 aa11.75□□□□□ -0.53
EFNB3-201ENST00000226091 SPANXDQ9BXN6 97 aa11.75□□□□□ -0.53
EFNB3-201ENST00000226091 SPANXCQ9NY87 97 aa11.75□□□□□ -0.53
EFNB3-201ENST00000226091 COX6CP09669 75 aa11.75□□□□□ -0.53
EFNB3-201ENST00000226091 CIRBPQ14011 172 aaKnown RBP11.75□□□□□ -0.53
EFNB3-201ENST00000226091 LINC00158P58513 81 aa11.74□□□□□ -0.53
EFNB3-201ENST00000226091 Q8N3U1 123 aa11.74□□□□□ -0.53
EFNB3-201ENST00000226091 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
EFNB3-201ENST00000226091 ANK3Q12955 4377 aaKnown RBP11.74□□□□□ -0.53
EFNB3-201ENST00000226091 DEFB135Q30KP9 77 aa11.74□□□□□ -0.53
EFNB3-201ENST00000226091 LRRC75A-AS1Q8N1F1 130 aa11.73□□□□□ -0.53
EFNB3-201ENST00000226091 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
EFNB3-201ENST00000226091 INAFM1C9JVW0 142 aa11.73□□□□□ -0.53
EFNB3-201ENST00000226091 BEAN1Q3B7T3 259 aa11.73□□□□□ -0.53
EFNB3-201ENST00000226091 TMEM126AQ9H061 195 aa11.73□□□□□ -0.53
EFNB3-201ENST00000226091 Q6Q795 121 aa11.72□□□□□ -0.53
EFNB3-201ENST00000226091 OR13C6PQ8NH95 151 aa11.72□□□□□ -0.53
EFNB3-201ENST00000226091 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
EFNB3-201ENST00000226091 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.54
EFNB3-201ENST00000226091 J3QKU1 62 aa11.71□□□□□ -0.54
EFNB3-201ENST00000226091 SOSTDC1Q6X4U4 206 aa11.71□□□□□ -0.54
EFNB3-201ENST00000226091 Q9HAA7 133 aa11.71□□□□□ -0.54
EFNB3-201ENST00000226091 GYPEP15421 78 aa11.7□□□□□ -0.54
EFNB3-201ENST00000226091 LINC00526Q96FQ7 95 aa11.7□□□□□ -0.54
EFNB3-201ENST00000226091 DNAJC30Q96LL9 226 aa11.7□□□□□ -0.54
EFNB3-201ENST00000226091 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
EFNB3-201ENST00000226091 KRTAP10-3P60369 221 aa11.69□□□□□ -0.54
EFNB3-201ENST00000226091 MGAM2Q2M2H8 2515 aa11.69□□□□□ -0.54
EFNB3-201ENST00000226091 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
EFNB3-201ENST00000226091 hADV29S1A0JD25 119 aa11.68□□□□□ -0.54
EFNB3-201ENST00000226091 SMIM9A6NGZ8 99 aa11.68□□□□□ -0.54
EFNB3-201ENST00000226091 NDUFA1O15239 70 aa11.68□□□□□ -0.54
EFNB3-201ENST00000226091 TIRAPP58753 221 aa11.68□□□□□ -0.54
EFNB3-201ENST00000226091 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
EFNB3-201ENST00000226091 IGLV5-45A0A087WSX0 123 aa11.67□□□□□ -0.54
EFNB3-201ENST00000226091 C5orf47Q569G3 176 aa11.67□□□□□ -0.54
EFNB3-201ENST00000226091 GAGE2AQ6NT46 116 aa11.67□□□□□ -0.54
EFNB3-201ENST00000226091 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
EFNB3-201ENST00000226091 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
EFNB3-201ENST00000226091 DAZ4Q86SG3 579 aaKnown RBP11.67□□□□□ -0.54
EFNB3-201ENST00000226091 DAZ3Q9NR90 486 aaKnown RBP11.67□□□□□ -0.54
EFNB3-201ENST00000226091 PLAC8L1A1L4L8 177 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms