RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
SMPD3-201ENST00000219334 KIAA1549Q9HCM3 1950 aa13.8□□□□□ -0.2
SMPD3-201ENST00000219334 HRCT1Q6UXD1 115 aa13.8□□□□□ -0.2
SMPD3-201ENST00000219334 C16orf95Q9H693 158 aa13.79□□□□□ -0.2
SMPD3-201ENST00000219334 COX17Q14061 63 aa13.79□□□□□ -0.2
SMPD3-201ENST00000219334 ATP5EP2Q5VTU8 51 aa13.79□□□□□ -0.2
SMPD3-201ENST00000219334 CHCHD7Q9BUK0 85 aa13.79□□□□□ -0.2
SMPD3-201ENST00000219334 TRIAP1O43715 76 aa13.78□□□□□ -0.2
SMPD3-201ENST00000219334 MUC7Q8TAX7 377 aa13.78□□□□□ -0.2
SMPD3-201ENST00000219334 MAPKAPK5-AS1Q8N8E1 139 aa13.78□□□□□ -0.2
SMPD3-201ENST00000219334 C3orf84H3BNL1 204 aa13.78□□□□□ -0.2
SMPD3-201ENST00000219334 TRBV30A0A0K0K1B3 111 aa13.77□□□□□ -0.2
SMPD3-201ENST00000219334 BRI3O95415 125 aa13.77□□□□□ -0.2
SMPD3-201ENST00000219334 IGLV9-49A0A0B4J1Y8 123 aa13.77□□□□□ -0.2
SMPD3-201ENST00000219334 TEX49A0A1B0GTD5 131 aa13.77□□□□□ -0.21
SMPD3-201ENST00000219334 Q8IZM0 81 aa13.77□□□□□ -0.21
SMPD3-201ENST00000219334 CYSRT1A8MQ03 144 aa13.76□□□□□ -0.21
SMPD3-201ENST00000219334 CHD8Q9HCK8 2581 aa13.76□□□□□ -0.21
SMPD3-201ENST00000219334 CDC42SE2Q9NRR3 84 aa13.76□□□□□ -0.21
SMPD3-201ENST00000219334 NDUFC2O95298 119 aa13.76□□□□□ -0.21
SMPD3-201ENST00000219334 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
SMPD3-201ENST00000219334 SDIM1Q6ZPB5 146 aa13.75□□□□□ -0.21
SMPD3-201ENST00000219334 A0A1W2PPR1 153 aa13.75□□□□□ -0.21
SMPD3-201ENST00000219334 ZNF73O43830 326 aaPredicted RBP13.75□□□□□ -0.21
SMPD3-201ENST00000219334 ENHOQ6UWT2 76 aa13.74□□□□□ -0.21
SMPD3-201ENST00000219334 TANC2Q9HCD6 1990 aa13.74□□□□□ -0.21
SMPD3-201ENST00000219334 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
SMPD3-201ENST00000219334 ABCA12Q86UK0 2595 aa13.74□□□□□ -0.21
SMPD3-201ENST00000219334 RPL28P46779 137 aaKnown RBP13.74□□□□□ -0.21
SMPD3-201ENST00000219334 ARHGAP32A7KAX9 2087 aa13.74□□□□□ -0.21
SMPD3-201ENST00000219334 EDN2P20800 178 aa13.74□□□□□ -0.21
SMPD3-201ENST00000219334 Q6ZTC4 211 aa13.73□□□□□ -0.21
SMPD3-201ENST00000219334 J3KT08 172 aa13.73□□□□□ -0.21
SMPD3-201ENST00000219334 C3orf22Q8N5N4 141 aa13.72□□□□□ -0.21
SMPD3-201ENST00000219334 IGLV5-52A0A0A0MRZ9 124 aa13.72□□□□□ -0.21
SMPD3-201ENST00000219334 K7ERS5 55 aa13.71□□□□□ -0.21
SMPD3-201ENST00000219334 M0QXV9 152 aa13.71□□□□□ -0.21
SMPD3-201ENST00000219334 EGFEM1PQ0D2K5 195 aa13.71□□□□□ -0.21
SMPD3-201ENST00000219334 C20orf197Q8N268 126 aa13.71□□□□□ -0.21
SMPD3-201ENST00000219334 G3V4G9 280 aa13.7□□□□□ -0.22
SMPD3-201ENST00000219334 TP73-AS1Q9UF72 201 aa13.69□□□□□ -0.22
SMPD3-201ENST00000219334 ZNF580Q9UK33 172 aa13.69□□□□□ -0.22
SMPD3-201ENST00000219334 WFDC13Q8IUB5 93 aa13.68□□□□□ -0.22
SMPD3-201ENST00000219334 RNASE8Q8TDE3 154 aaKnown RBP13.68□□□□□ -0.22
SMPD3-201ENST00000219334 SMIM11BQ8TCY0 68 aa13.68□□□□□ -0.22
SMPD3-201ENST00000219334 UNQ6190/PRO20217Q6UXQ8 127 aa13.68□□□□□ -0.22
SMPD3-201ENST00000219334 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.68□□□□□ -0.22
SMPD3-201ENST00000219334 FSHBP01225 129 aa13.67□□□□□ -0.22
SMPD3-201ENST00000219334 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
SMPD3-201ENST00000219334 MUC22E2RYF6 1773 aaPredicted RBP13.66□□□□□ -0.22
SMPD3-201ENST00000219334 LRRK2Q5S007 2527 aa13.66□□□□□ -0.22
SMPD3-201ENST00000219334 C6orf223Q8N319 242 aa13.66□□□□□ -0.22
SMPD3-201ENST00000219334 C10orf25Q5T742 122 aa13.65□□□□□ -0.22
SMPD3-201ENST00000219334 C1orf134Q5TEV5 83 aa13.65□□□□□ -0.22
SMPD3-201ENST00000219334 TLN2Q9Y4G6 2542 aa13.65□□□□□ -0.22
SMPD3-201ENST00000219334 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
SMPD3-201ENST00000219334 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
SMPD3-201ENST00000219334 GAS8-AS1O95177 125 aa13.63□□□□□ -0.23
SMPD3-201ENST00000219334 NHLRC4P0CG21 123 aaPredicted RBP13.63□□□□□ -0.23
SMPD3-201ENST00000219334 FHL2Q14192 279 aa13.63□□□□□ -0.23
SMPD3-201ENST00000219334 FN1P02751 2386 aaKnown RBP13.63□□□□□ -0.23
SMPD3-201ENST00000219334 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
SMPD3-201ENST00000219334 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
SMPD3-201ENST00000219334 POM121L12Q8N7R1 296 aa13.63□□□□□ -0.23
SMPD3-201ENST00000219334 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
SMPD3-201ENST00000219334 HCFC1P51610 2035 aa13.6□□□□□ -0.23
SMPD3-201ENST00000219334 Q8N9L7 120 aa13.6□□□□□ -0.23
SMPD3-201ENST00000219334 IGIPA6NJ69 53 aa13.6□□□□□ -0.23
SMPD3-201ENST00000219334 LST1O00453 97 aa13.6□□□□□ -0.23
SMPD3-201ENST00000219334 REG3GQ6UW15 175 aa13.6□□□□□ -0.23
SMPD3-201ENST00000219334 CIRBP-AS1Q8TBR5 109 aa13.59□□□□□ -0.23
SMPD3-201ENST00000219334 FAM19A3Q7Z5A8 133 aa13.59□□□□□ -0.23
SMPD3-201ENST00000219334 PRR15LQ9BU68 103 aa13.58□□□□□ -0.24
SMPD3-201ENST00000219334 LRP4O75096 1905 aa13.58□□□□□ -0.24
SMPD3-201ENST00000219334 UQCRQO14949 82 aa13.58□□□□□ -0.24
SMPD3-201ENST00000219334 IGLV4-60A0A075B6I1 120 aa13.58□□□□□ -0.24
SMPD3-201ENST00000219334 C9orf116Q5BN46 136 aaPredicted RBP13.57□□□□□ -0.24
SMPD3-201ENST00000219334 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
SMPD3-201ENST00000219334 SMIM1B2RUZ4 78 aa13.56□□□□□ -0.24
SMPD3-201ENST00000219334 MT-ATP8P03928 68 aa13.56□□□□□ -0.24
SMPD3-201ENST00000219334 TRBV10-3A0A0K0K1G6 114 aa13.55□□□□□ -0.24
SMPD3-201ENST00000219334 FAM236DA0A1B0GTK5 79 aa13.55□□□□□ -0.24
SMPD3-201ENST00000219334 FAM236CP0DP71 79 aa13.55□□□□□ -0.24
SMPD3-201ENST00000219334 SERP1Q9Y6X1 66 aa13.55□□□□□ -0.24
SMPD3-201ENST00000219334 LINC01556Q5JQF7 62 aa13.55□□□□□ -0.24
SMPD3-201ENST00000219334 SPTSSBQ8NFR3 76 aa13.55□□□□□ -0.24
SMPD3-201ENST00000219334 C1orf137Q5JT78 98 aa13.54□□□□□ -0.24
SMPD3-201ENST00000219334 F8WDY8 70 aa13.53□□□□□ -0.24
SMPD3-201ENST00000219334 LYPD5Q6UWN5 251 aa13.53□□□□□ -0.24
SMPD3-201ENST00000219334 COX6A2Q02221 97 aa13.53□□□□□ -0.24
SMPD3-201ENST00000219334 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
SMPD3-201ENST00000219334 BEAN1Q3B7T3 259 aa13.52□□□□□ -0.25
SMPD3-201ENST00000219334 BRK1Q8WUW1 75 aa13.52□□□□□ -0.25
SMPD3-201ENST00000219334 CSDC2Q9Y534 153 aaKnown RBP13.52□□□□□ -0.25
SMPD3-201ENST00000219334 MPLKIPQ8TAP9 179 aa13.51□□□□□ -0.25
SMPD3-201ENST00000219334 CEP295Q9C0D2 2601 aa13.51□□□□□ -0.25
SMPD3-201ENST00000219334 NTM-AS1Q6ZSK4 140 aa13.51□□□□□ -0.25
SMPD3-201ENST00000219334 YPEL4Q96NS1 127 aa13.51□□□□□ -0.25
SMPD3-201ENST00000219334 NDUFC2-KCTD14E9PQ53 114 aa13.51□□□□□ -0.25
SMPD3-201ENST00000219334 MRPL55Q7Z7F7 128 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms