RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	CPSF4	O95639	269 aa	Known RBP	3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	IGKV1D-33	P01593	117 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	IGKV1-33	P01594	117 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	CBLN1	P23435	193 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	PSMG4	Q5JS54	123 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746		Q6ZRP5	223 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	TEN1	Q86WV5	123 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	C15orf53	Q8NAA6	179 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	NUP35	Q8NFH5	326 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	GTSF1	Q8WW33	167 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	BORCS8	Q96FH0	119 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	LINC00479	Q96M42	142 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	ZNF714	Q96N38	554 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	SMIM7	Q9BQ49	75 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	IMUP	Q9GZP8	106 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	TP53TG3	Q9ULZ0	132 aa		3.57	□□□□□ -1.84
CASC19-256	ENST00000641746	TRAV27	A0A087WT01	109 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	TRAV8-1	A0A0A6YYK1	113 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746		A8MWL6	223 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	NDUFC2-KCTD14	E9PQ53	114 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	BUB1B-PAK6	H3BSN5	160 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746		M0R129	80 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	PYY	P10082	97 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	COX7C	P15954	63 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	HLA-DMB	P28068	263 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	EDDM3B	P56851	147 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	SYNJ2BP	P57105	145 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	SMIM11A	P58511	58 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	KRTAP10-1	P60331	282 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	CD177	Q8N6Q3	437 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	OR10AC1	Q8NH08	325 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	NMNAT3	Q96T66	252 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	TMEM243	Q9BU79	118 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	C11orf68	Q9H3H3	251 aa	Known RBP	3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	DNAJC15	Q9Y5T4	150 aa		3.56	□□□□□ -1.84
CASC19-256	ENST00000641746	TRBV19	A0A075B6N1	114 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	LOC107986453	A0A1B0GWG9	222 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	IGLV1-47	P01700	117 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	CSN1S1	P47710	185 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	RPL23	P62829	140 aa	Known RBP	3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	RPL18	Q07020	188 aa	Known RBP	3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	EBI3	Q14213	229 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	LCE3A	Q5TA76	89 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	C2orf91	Q6ZV80	131 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	TMEM61	Q8N0U2	210 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746		Q8N9W7	124 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	ZC2HC1A	Q96GY0	325 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	PARP12	Q9H0J9	701 aa	Known RBP	3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	AGPAT4-IT1	Q9H0P7	198 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	SLC39A9	Q9NUM3	307 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	PRO0461	Q9UI25	63 aa		3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	F11R	Q9Y624	299 aa	Known RBP	3.55	□□□□□ -1.84
CASC19-256	ENST00000641746	TRAV12-2	A0A075B6T6	113 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	DEFB131B	A0A096LNP1	70 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	TRBV7-7	A0A0K0K1E9	115 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	NBDY	A0A0U1RRE5	68 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746		M0R381	172 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	ASAH2B	P0C7U1	165 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	IGHV3-43D	P0DP04	118 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	CDK5R1	Q15078	307 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	CFAP126	Q5VTH2	177 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	NFE4	Q86UQ8	179 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	LHFPL1	Q86WI0	220 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	AMN1	Q8IY45	258 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	NKAPP1	Q8N9T2	125 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	BRK1	Q8WUW1	75 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	PKHD1L1	Q86WI1	4243 aa		3.54	□□□□□ -1.84
CASC19-256	ENST00000641746	TRAV2	A0A0B4J234	112 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	TRAV41	A0A0B4J266	112 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	RBAKDN	A6NC62	111 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	ZFP92	A6NM28	416 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746		A8MWV9	139 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	SSSCA1	O60232	199 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	HLA-DQA1	P01909	254 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	APCS	P02743	223 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	SCGB1C2	P0DMR2	95 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	RTL8B	Q17RB0	113 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	TRAPPC6B	Q86SZ2	158 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	DYNLRB2	Q8TF09	96 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	TSKU	Q8WUA8	353 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	SHANK2-AS3	Q9BTD1	123 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	RTL8A	Q9BWD3	113 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	GFRA4	Q9GZZ7	299 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	ZNF286A	Q9HBT8	521 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	CCL28	Q9NRJ3	127 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	GNG13	Q9P2W3	67 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	SERP1	Q9Y6X1	66 aa		3.53	□□□□□ -1.84
CASC19-256	ENST00000641746	IGHV3-72	A0A0B4J1Y9	119 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	CEBPZOS	A8MTT3	80 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	ATOX1	O00244	68 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	HLA-DRB4	P13762	266 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	S100A3	P33764	101 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	LINC00313	P59037	77 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	NPC2	P61916	151 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	RPS11	P62280	158 aa	Known RBP eCLIP	3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	CCL20	P78556	96 aa		3.52	□□□□□ -1.85
CASC19-256	ENST00000641746	DEFB114	Q30KQ6	69 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 120 ms