RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 AMTP48728 403 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 LYPD5Q6UWN5 251 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
PHGDH-222ENST00000641587 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
PHGDH-222ENST00000641587 J3QL48 77 aa6.73□□□□□ -1.33
PHGDH-222ENST00000641587 TSHBP01222 138 aa6.73□□□□□ -1.33
PHGDH-222ENST00000641587 LAGE3Q14657 143 aa6.73□□□□□ -1.33
PHGDH-222ENST00000641587 NFE4Q86UQ8 179 aa6.73□□□□□ -1.33
PHGDH-222ENST00000641587 CHCHD1Q96BP2 118 aaKnown RBP6.73□□□□□ -1.33
PHGDH-222ENST00000641587 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 PMCHL1Q16048 86 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 ORMDL2Q53FV1 153 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 TMEM97Q5BJF2 176 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 PDZD11Q5EBL8 140 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 URB1-AS1Q96HZ7 61 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
PHGDH-222ENST00000641587 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 K7EMI3 77 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 UBE2L6O14933 153 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 LINC00310P59036 64 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 CHCHD5Q9BSY4 110 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 TMEM243Q9BU79 118 aa6.71□□□□□ -1.34
PHGDH-222ENST00000641587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
PHGDH-222ENST00000641587 IGLV5-52A0A0A0MRZ9 124 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
PHGDH-222ENST00000641587 LINC01546A6NGU7 62 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 NUPR1O60356 82 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 HBDP02042 147 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 S100A2P29034 98 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 SNRPEP62304 92 aaKnown RBP6.7□□□□□ -1.34
PHGDH-222ENST00000641587 COA6Q5JTJ3 125 aaKnown RBP6.7□□□□□ -1.34
PHGDH-222ENST00000641587 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 TMEM18Q96B42 140 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
PHGDH-222ENST00000641587 TRAV9-2A0A087WT02 112 aa6.69□□□□□ -1.34
PHGDH-222ENST00000641587 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
PHGDH-222ENST00000641587 G0S2P27469 103 aa6.69□□□□□ -1.34
PHGDH-222ENST00000641587 LELP1Q5T871 98 aa6.69□□□□□ -1.34
PHGDH-222ENST00000641587 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
PHGDH-222ENST00000641587 CHCHD7Q9BUK0 85 aa6.69□□□□□ -1.34
PHGDH-222ENST00000641587 TRAV8-6A0A0B4J262 113 aa6.68□□□□□ -1.34
PHGDH-222ENST00000641587 FABP4P15090 132 aa6.68□□□□□ -1.34
PHGDH-222ENST00000641587 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
PHGDH-222ENST00000641587 GAGE6Q13070 117 aa6.68□□□□□ -1.34
PHGDH-222ENST00000641587 AMMECR1LQ6DCA0 310 aa6.68□□□□□ -1.34
PHGDH-222ENST00000641587 HIST3H2BBQ8N257 126 aa6.68□□□□□ -1.34
PHGDH-222ENST00000641587 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
PHGDH-222ENST00000641587 C5orf52A6NGY3 159 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 ESDP10768 282 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 TIRAPP58753 221 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 SMAGPQ0VAQ4 97 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 TOMM6Q96B49 74 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 SCGB3A1Q96QR1 104 aa6.67□□□□□ -1.34
PHGDH-222ENST00000641587 A0A096LNJ9 63 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 PSCAO43653 123 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 LEPROTL1O95214 131 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 WFDC2Q14508 124 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 DGAT2L7PQ6IED9 249 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 Q8N814 137 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 Q9HAA7 133 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
PHGDH-222ENST00000641587 A0A087WX48 190 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-222ENST00000641587 H7C423 109 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 ATP5LO75964 103 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 FGF6P10767 208 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 PKIAP61925 76 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 LINC00528Q8N1L1 170 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 NTN5Q8WTR8 489 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-222ENST00000641587 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
PHGDH-222ENST00000641587 H0Y8G0 127 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-222ENST00000641587 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 Q6ZN92 141 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 ERASQ7Z444 233 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 C10orf126Q8N4M7 172 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
PHGDH-222ENST00000641587 K7EP13 123 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 ZNF25P17030 456 aaPredicted RBP6.63□□□□□ -1.35
PHGDH-222ENST00000641587 KRTDAPP60985 99 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 MPV17L2Q567V2 206 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 RNASE13Q5GAN3 156 aaKnown RBP6.63□□□□□ -1.35
PHGDH-222ENST00000641587 Q6ZUT4 128 aa6.63□□□□□ -1.35
PHGDH-222ENST00000641587 MRPL52Q86TS9 123 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms