RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 UQCR10Q9UDW1 63 aa12.71□□□□□ -0.38
PHGDH-209ENST00000641074 TMEM97Q5BJF2 176 aa12.7□□□□□ -0.38
PHGDH-209ENST00000641074 Q6ZTC4 211 aa12.7□□□□□ -0.38
PHGDH-209ENST00000641074 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
PHGDH-209ENST00000641074 MRPS36P82909 103 aaKnown RBP12.69□□□□□ -0.38
PHGDH-209ENST00000641074 DGAT2L7PQ6IED9 249 aa12.69□□□□□ -0.38
PHGDH-209ENST00000641074 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
PHGDH-209ENST00000641074 UBE2L6O14933 153 aa12.69□□□□□ -0.38
PHGDH-209ENST00000641074 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
PHGDH-209ENST00000641074 HUWE1Q7Z6Z7 4374 aaKnown RBP12.68□□□□□ -0.38
PHGDH-209ENST00000641074 H7C423 109 aa12.68□□□□□ -0.38
PHGDH-209ENST00000641074 TP73-AS1Q9UF72 201 aa12.68□□□□□ -0.38
PHGDH-209ENST00000641074 NANOS2P60321 138 aaKnown RBP12.67□□□□□ -0.38
PHGDH-209ENST00000641074 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
PHGDH-209ENST00000641074 IGKV2D-26A0A0A0MRZ7 120 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 GAGE6Q13070 117 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 CHCHD5Q9BSY4 110 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 COX8AP10176 69 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 SMAGPQ0VAQ4 97 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
PHGDH-209ENST00000641074 NFE4Q86UQ8 179 aa12.66□□□□□ -0.38
PHGDH-209ENST00000641074 DNHD1Q96M86 4753 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 NMUP48645 174 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 OR5A1Q8NGJ0 315 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
PHGDH-209ENST00000641074 C2orf88Q9BSF0 95 aa12.64□□□□□ -0.39
PHGDH-209ENST00000641074 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
PHGDH-209ENST00000641074 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
PHGDH-209ENST00000641074 ZNF25P17030 456 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-209ENST00000641074 HNRNPA3P51991 378 aaKnown RBP12.62□□□□□ -0.39
PHGDH-209ENST00000641074 DEFA6Q01524 100 aa12.62□□□□□ -0.39
PHGDH-209ENST00000641074 TMEM170BQ5T4T1 132 aa12.62□□□□□ -0.39
PHGDH-209ENST00000641074 H3BNG1 76 aa12.61□□□□□ -0.39
PHGDH-209ENST00000641074 UBE2D1P51668 147 aa12.61□□□□□ -0.39
PHGDH-209ENST00000641074 SH2D6Q7Z4S9 175 aa12.61□□□□□ -0.39
PHGDH-209ENST00000641074 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
PHGDH-209ENST00000641074 ZNF22P17026 224 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-209ENST00000641074 BOD1L2Q8IYS8 172 aa12.61□□□□□ -0.39
PHGDH-209ENST00000641074 TTTY13Q9BZ97 58 aa12.61□□□□□ -0.39
PHGDH-209ENST00000641074 DEFB131BA0A096LNP1 70 aa12.6□□□□□ -0.39
PHGDH-209ENST00000641074 E9PLD3 99 aa12.6□□□□□ -0.39
PHGDH-209ENST00000641074 KRTAP21-3Q3LHN1 58 aa12.6□□□□□ -0.39
PHGDH-209ENST00000641074 TINCRA0A1B0GVN0 87 aa12.59□□□□□ -0.39
PHGDH-209ENST00000641074 CTAG1AP78358 180 aa12.59□□□□□ -0.39
PHGDH-209ENST00000641074 TMEM262E9PQX1 116 aa12.58□□□□□ -0.39
PHGDH-209ENST00000641074 B9D2Q9BPU9 175 aa12.58□□□□□ -0.39
PHGDH-209ENST00000641074 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.39
PHGDH-209ENST00000641074 TRAV8-6A0A0B4J262 113 aa12.58□□□□□ -0.4
PHGDH-209ENST00000641074 DLEU1O43261 78 aa12.58□□□□□ -0.4
PHGDH-209ENST00000641074 HERVK_113P61574 105 aa12.58□□□□□ -0.4
PHGDH-209ENST00000641074 TRAV13-1A0A0B4J241 112 aa12.57□□□□□ -0.4
PHGDH-209ENST00000641074 TMEM223A0PJW6 202 aa12.57□□□□□ -0.4
PHGDH-209ENST00000641074 MPV17L2Q567V2 206 aa12.57□□□□□ -0.4
PHGDH-209ENST00000641074 MRPS16Q9Y3D3 137 aaKnown RBP12.57□□□□□ -0.4
PHGDH-209ENST00000641074 RBX1P62877 108 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 LINC00242Q5T6M2 205 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 LELP1Q5T871 98 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 MAPKAPK5-AS1Q8N8E1 139 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 A0A1B0GUV1 79 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 TIRAPP58753 221 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 LYPD5Q6UWN5 251 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 C2orf91Q6ZV80 131 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 FAM19A3Q7Z5A8 133 aa12.56□□□□□ -0.4
PHGDH-209ENST00000641074 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
PHGDH-209ENST00000641074 COX6A2Q02221 97 aa12.55□□□□□ -0.4
PHGDH-209ENST00000641074 LINC00469Q8N7U9 141 aa12.54□□□□□ -0.4
PHGDH-209ENST00000641074 TRAV10A0A0B4J240 114 aa12.53□□□□□ -0.4
PHGDH-209ENST00000641074 COL7A1Q02388 2944 aa12.53□□□□□ -0.4
PHGDH-209ENST00000641074 IGLV5-45A0A087WSX0 123 aa12.53□□□□□ -0.4
PHGDH-209ENST00000641074 HERVK_113P63121 156 aa12.53□□□□□ -0.4
PHGDH-209ENST00000641074 CDKN2A-AS1Q9UH64 79 aa12.53□□□□□ -0.4
PHGDH-209ENST00000641074 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.41
PHGDH-209ENST00000641074 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
PHGDH-209ENST00000641074 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.41
PHGDH-209ENST00000641074 SEC11AP67812 179 aa12.52□□□□□ -0.41
PHGDH-209ENST00000641074 Q8N3U1 123 aa12.52□□□□□ -0.41
PHGDH-209ENST00000641074 SNHG12Q9BXW3 62 aa12.52□□□□□ -0.41
PHGDH-209ENST00000641074 SIVA1O15304 175 aa12.51□□□□□ -0.41
PHGDH-209ENST00000641074 MYMXA0A1B0GTQ4 84 aa12.51□□□□□ -0.41
PHGDH-209ENST00000641074 EREGO14944 169 aa12.51□□□□□ -0.41
PHGDH-209ENST00000641074 LEPROTO15243 131 aa12.51□□□□□ -0.41
PHGDH-209ENST00000641074 TRAV8-3A0A0A6YYJ7 113 aa12.5□□□□□ -0.41
PHGDH-209ENST00000641074 M0R143 59 aa12.5□□□□□ -0.41
PHGDH-209ENST00000641074 J3QQQ9 107 aa12.49□□□□□ -0.41
PHGDH-209ENST00000641074 SPINK8P0C7L1 97 aa12.49□□□□□ -0.41
PHGDH-209ENST00000641074 H3BRM9 83 aa12.48□□□□□ -0.41
PHGDH-209ENST00000641074 ESRGQ1W209 222 aa12.48□□□□□ -0.41
PHGDH-209ENST00000641074 IGHV1-58A0A0C4DH39 117 aa12.48□□□□□ -0.41
PHGDH-209ENST00000641074 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
PHGDH-209ENST00000641074 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
PHGDH-209ENST00000641074 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
PHGDH-209ENST00000641074 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
PHGDH-209ENST00000641074 HINT1P49773 126 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-209ENST00000641074 CLPSL2Q6UWE3 100 aa12.47□□□□□ -0.41
PHGDH-209ENST00000641074 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms