RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
PTPN11-207ENST00000639857 TCAPO15273 167 aa11.44□□□□□ -0.58
PTPN11-207ENST00000639857 RPL32P62910 135 aaKnown RBP11.44□□□□□ -0.58
PTPN11-207ENST00000639857 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
PTPN11-207ENST00000639857 LINC00528Q8N1L1 170 aa11.44□□□□□ -0.58
PTPN11-207ENST00000639857 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
PTPN11-207ENST00000639857 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
PTPN11-207ENST00000639857 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
PTPN11-207ENST00000639857 FCER1GP30273 86 aa11.43□□□□□ -0.58
PTPN11-207ENST00000639857 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
PTPN11-207ENST00000639857 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
PTPN11-207ENST00000639857 VPS13BQ7Z7G8 4022 aa11.42□□□□□ -0.58
PTPN11-207ENST00000639857 CKS2P33552 79 aa11.42□□□□□ -0.58
PTPN11-207ENST00000639857 CDC42SE2Q9NRR3 84 aa11.42□□□□□ -0.58
PTPN11-207ENST00000639857 SRRM2Q9UQ35 2752 aaKnown RBP11.42□□□□□ -0.58
PTPN11-207ENST00000639857 PHOX2AO14813 284 aa11.41□□□□□ -0.58
PTPN11-207ENST00000639857 PPBPP02775 128 aa11.41□□□□□ -0.58
PTPN11-207ENST00000639857 CLLU1Q5K131 121 aa11.41□□□□□ -0.58
PTPN11-207ENST00000639857 MRPL54Q6P161 138 aaKnown RBP11.41□□□□□ -0.58
PTPN11-207ENST00000639857 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
PTPN11-207ENST00000639857 LINC00959A0A1B0GUT2 108 aa11.4□□□□□ -0.58
PTPN11-207ENST00000639857 SDIM1Q6ZPB5 146 aa11.4□□□□□ -0.58
PTPN11-207ENST00000639857 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
PTPN11-207ENST00000639857 ANAPC16Q96DE5 110 aa11.4□□□□□ -0.58
PTPN11-207ENST00000639857 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
PTPN11-207ENST00000639857 GVQW2A0A096LPI5 108 aaPredicted RBP11.39□□□□□ -0.59
PTPN11-207ENST00000639857 CCL25O15444 150 aa11.39□□□□□ -0.59
PTPN11-207ENST00000639857 FOXI1Q12951 378 aa11.39□□□□□ -0.59
PTPN11-207ENST00000639857 ZNF664Q8N3J9 261 aa11.39□□□□□ -0.59
PTPN11-207ENST00000639857 TIMM21Q9BVV7 248 aa11.39□□□□□ -0.59
PTPN11-207ENST00000639857 D6R8Y8 96 aa11.38□□□□□ -0.59
PTPN11-207ENST00000639857 TNFRSF6BO95407 300 aa11.38□□□□□ -0.59
PTPN11-207ENST00000639857 MT-ND4LP03901 98 aa11.38□□□□□ -0.59
PTPN11-207ENST00000639857 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
PTPN11-207ENST00000639857 SS18Q15532 418 aa11.38□□□□□ -0.59
PTPN11-207ENST00000639857 SMIM2Q9BVW6 85 aa11.38□□□□□ -0.59
PTPN11-207ENST00000639857 UBE2D4Q9Y2X8 147 aa11.38□□□□□ -0.59
PTPN11-207ENST00000639857 SLPIP03973 132 aa11.36□□□□□ -0.59
PTPN11-207ENST00000639857 XCL1P47992 114 aa11.36□□□□□ -0.59
PTPN11-207ENST00000639857 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
PTPN11-207ENST00000639857 ORMDL3Q8N138 153 aa11.36□□□□□ -0.59
PTPN11-207ENST00000639857 FLG2Q5D862 2391 aaPredicted RBP11.35□□□□□ -0.59
PTPN11-207ENST00000639857 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
PTPN11-207ENST00000639857 UQCC3Q6UW78 93 aa11.35□□□□□ -0.59
PTPN11-207ENST00000639857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.35□□□□□ -0.59
PTPN11-207ENST00000639857 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
PTPN11-207ENST00000639857 NPYP01303 97 aa11.34□□□□□ -0.59
PTPN11-207ENST00000639857 LAMTOR2Q9Y2Q5 125 aa11.34□□□□□ -0.59
PTPN11-207ENST00000639857 HIGD2BQ4VC39 106 aa11.33□□□□□ -0.6
PTPN11-207ENST00000639857 SPANXA1Q9NS26 97 aa11.33□□□□□ -0.6
PTPN11-207ENST00000639857 PKIGQ9Y2B9 76 aa11.33□□□□□ -0.6
PTPN11-207ENST00000639857 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
PTPN11-207ENST00000639857 KRTAP10-4P60372 401 aaPredicted RBP11.31□□□□□ -0.6
PTPN11-207ENST00000639857 TMEM136Q6ZRR5 245 aa11.31□□□□□ -0.6
PTPN11-207ENST00000639857 SPACA4Q8TDM5 124 aa11.31□□□□□ -0.6
PTPN11-207ENST00000639857 PRELID3AQ96N28 172 aa11.31□□□□□ -0.6
PTPN11-207ENST00000639857 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
PTPN11-207ENST00000639857 PRSS47A8MTI9 375 aa11.3□□□□□ -0.6
PTPN11-207ENST00000639857 PANO1I0J062 215 aa11.3□□□□□ -0.6
PTPN11-207ENST00000639857 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
PTPN11-207ENST00000639857 Q6ZUT4 128 aa11.3□□□□□ -0.6
PTPN11-207ENST00000639857 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
PTPN11-207ENST00000639857 COX7A2LO14548 114 aa11.29□□□□□ -0.6
PTPN11-207ENST00000639857 IFITM2Q01629 132 aa11.29□□□□□ -0.6
PTPN11-207ENST00000639857 RAB5AP20339 215 aa11.28□□□□□ -0.6
PTPN11-207ENST00000639857 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
PTPN11-207ENST00000639857 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
PTPN11-207ENST00000639857 TRAV13-1A0A0B4J241 112 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 ADCYAP1P18509 176 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 MALP21145 153 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 COX6A2Q02221 97 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 CARD19Q96LW7 228 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 MAP1LC3AQ9H492 121 aa11.27□□□□□ -0.61
PTPN11-207ENST00000639857 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
PTPN11-207ENST00000639857 A0A087WYN8 130 aa11.26□□□□□ -0.61
PTPN11-207ENST00000639857 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
PTPN11-207ENST00000639857 PLAC8Q9NZF1 115 aa11.26□□□□□ -0.61
PTPN11-207ENST00000639857 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
PTPN11-207ENST00000639857 K7EMI3 77 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 APOMO95445 188 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
PTPN11-207ENST00000639857 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 SEC11CQ9BY50 192 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 PYGO1Q9Y3Y4 419 aa11.25□□□□□ -0.61
PTPN11-207ENST00000639857 KRTAP29-1A8MX34 341 aaPredicted RBP11.24□□□□□ -0.61
PTPN11-207ENST00000639857 SYCNQ0VAF6 134 aa11.24□□□□□ -0.61
PTPN11-207ENST00000639857 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
PTPN11-207ENST00000639857 Q8N8P6 123 aa11.23□□□□□ -0.61
PTPN11-207ENST00000639857 C2orf48Q96LS8 159 aa11.22□□□□□ -0.61
PTPN11-207ENST00000639857 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
PTPN11-207ENST00000639857 IGHV3OR16-9A0A0B4J2B5 98 aa11.21□□□□□ -0.61
PTPN11-207ENST00000639857 IFITM10A6NMD0 228 aa11.21□□□□□ -0.61
PTPN11-207ENST00000639857 OR10D4PQ8NGN7 298 aa11.21□□□□□ -0.61
PTPN11-207ENST00000639857 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
PTPN11-207ENST00000639857 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms