RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 KIR2DL4Q99706 377 aa12.15□□□□□ -0.46
CLN6-221ENST00000637494 A0A1B0GW15 77 aa12.14□□□□□ -0.47
CLN6-221ENST00000637494 XCL1P47992 114 aa12.14□□□□□ -0.47
CLN6-221ENST00000637494 MRPL52Q86TS9 123 aaKnown RBP12.14□□□□□ -0.47
CLN6-221ENST00000637494 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
CLN6-221ENST00000637494 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
CLN6-221ENST00000637494 CCL25O15444 150 aa12.13□□□□□ -0.47
CLN6-221ENST00000637494 SLPIP03973 132 aa12.13□□□□□ -0.47
CLN6-221ENST00000637494 S100A8P05109 93 aa12.13□□□□□ -0.47
CLN6-221ENST00000637494 SUMO2P61956 95 aaKnown RBP12.13□□□□□ -0.47
CLN6-221ENST00000637494 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
CLN6-221ENST00000637494 PKIGQ9Y2B9 76 aa12.13□□□□□ -0.47
CLN6-221ENST00000637494 GVQW2A0A096LPI5 108 aaPredicted RBP12.12□□□□□ -0.47
CLN6-221ENST00000637494 SMIM27A0A1W2PRY6 76 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 PANO1I0J062 215 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 CAMPP49913 170 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 KRTAP10-4P60372 401 aaPredicted RBP12.12□□□□□ -0.47
CLN6-221ENST00000637494 FOXI1Q12951 378 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 TMEM18Q96B42 140 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
CLN6-221ENST00000637494 IGHV1-58A0A0C4DH39 117 aa12.11□□□□□ -0.47
CLN6-221ENST00000637494 LINC00862A6NCI5 91 aa12.11□□□□□ -0.47
CLN6-221ENST00000637494 C9JQL5 133 aa12.11□□□□□ -0.47
CLN6-221ENST00000637494 OXTP01178 125 aa12.11□□□□□ -0.47
CLN6-221ENST00000637494 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
CLN6-221ENST00000637494 MYCBP2O75592 4640 aa12.1□□□□□ -0.47
CLN6-221ENST00000637494 F8W036 122 aa12.1□□□□□ -0.47
CLN6-221ENST00000637494 CKS2P33552 79 aa12.1□□□□□ -0.47
CLN6-221ENST00000637494 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
CLN6-221ENST00000637494 SPACA4Q8TDM5 124 aa12.1□□□□□ -0.47
CLN6-221ENST00000637494 A0A087WYN8 130 aa12.09□□□□□ -0.47
CLN6-221ENST00000637494 TCAPO15273 167 aa12.09□□□□□ -0.47
CLN6-221ENST00000637494 CHTF8P0CG12 524 aa12.09□□□□□ -0.47
CLN6-221ENST00000637494 COX6A2Q02221 97 aa12.09□□□□□ -0.47
CLN6-221ENST00000637494 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
CLN6-221ENST00000637494 NRACQ8N912 160 aa12.09□□□□□ -0.47
CLN6-221ENST00000637494 CD164L2Q6UWJ8 174 aa12.08□□□□□ -0.48
CLN6-221ENST00000637494 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
CLN6-221ENST00000637494 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
CLN6-221ENST00000637494 C1orf196B1AJZ1 125 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 MALP21145 153 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 HBBP68871 147 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 C7orf33Q8WU49 177 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 HERC1Q15751 4861 aa12.07□□□□□ -0.48
CLN6-221ENST00000637494 IGKV2-24A0A0C4DH68 120 aa12.05□□□□□ -0.48
CLN6-221ENST00000637494 MRPL54Q6P161 138 aaKnown RBP12.05□□□□□ -0.48
CLN6-221ENST00000637494 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
CLN6-221ENST00000637494 PLAC8Q9NZF1 115 aa12.05□□□□□ -0.48
CLN6-221ENST00000637494 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
CLN6-221ENST00000637494 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
CLN6-221ENST00000637494 TRBV24-1A0A075B6N3 115 aa12.04□□□□□ -0.48
CLN6-221ENST00000637494 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
CLN6-221ENST00000637494 CARD19Q96LW7 228 aa12.04□□□□□ -0.48
CLN6-221ENST00000637494 D6R8Y8 96 aa12.03□□□□□ -0.48
CLN6-221ENST00000637494 COX7A2LO14548 114 aa12.03□□□□□ -0.48
CLN6-221ENST00000637494 TNFRSF6BO95407 300 aa12.03□□□□□ -0.48
CLN6-221ENST00000637494 PPBPP02775 128 aa12.03□□□□□ -0.48
CLN6-221ENST00000637494 RAB14P61106 215 aa12.03□□□□□ -0.48
CLN6-221ENST00000637494 TIMM21Q9BVV7 248 aa12.03□□□□□ -0.48
CLN6-221ENST00000637494 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
CLN6-221ENST00000637494 STPG4Q8N801 248 aa12.02□□□□□ -0.49
CLN6-221ENST00000637494 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.49
CLN6-221ENST00000637494 SYCNQ0VAF6 134 aa12.01□□□□□ -0.49
CLN6-221ENST00000637494 RNASE13Q5GAN3 156 aaKnown RBP12.01□□□□□ -0.49
CLN6-221ENST00000637494 ATP5L2Q7Z4Y8 100 aa12.01□□□□□ -0.49
CLN6-221ENST00000637494 A0A1B0GXF2 115 aa12□□□□□ -0.49
CLN6-221ENST00000637494 PHOX2AO14813 284 aa12□□□□□ -0.49
CLN6-221ENST00000637494 APOMO95445 188 aa12□□□□□ -0.49
CLN6-221ENST00000637494 SERTAD4-AS1Q5TG53 156 aa12□□□□□ -0.49
CLN6-221ENST00000637494 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
CLN6-221ENST00000637494 A0A096LNI7 61 aa11.99□□□□□ -0.49
CLN6-221ENST00000637494 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
CLN6-221ENST00000637494 Q6ZRU5 148 aa11.99□□□□□ -0.49
CLN6-221ENST00000637494 Q6ZUT4 128 aa11.99□□□□□ -0.49
CLN6-221ENST00000637494 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
CLN6-221ENST00000637494 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
CLN6-221ENST00000637494 RAB5AP20339 215 aa11.98□□□□□ -0.49
CLN6-221ENST00000637494 PNRC1Q12796 327 aaPredicted RBP11.98□□□□□ -0.49
CLN6-221ENST00000637494 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
CLN6-221ENST00000637494 NPYP01303 97 aa11.97□□□□□ -0.49
CLN6-221ENST00000637494 MT-ND4LP03901 98 aa11.97□□□□□ -0.49
CLN6-221ENST00000637494 TMEM136Q6ZRR5 245 aa11.97□□□□□ -0.49
CLN6-221ENST00000637494 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
CLN6-221ENST00000637494 RPL39P62891 51 aaKnown RBP11.96□□□□□ -0.49
CLN6-221ENST00000637494 C5orf38Q86SI9 138 aa11.96□□□□□ -0.49
CLN6-221ENST00000637494 ANAPC16Q96DE5 110 aa11.96□□□□□ -0.49
CLN6-221ENST00000637494 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
CLN6-221ENST00000637494 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
CLN6-221ENST00000637494 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
CLN6-221ENST00000637494 IFITM10A6NMD0 228 aa11.93□□□□□ -0.5
CLN6-221ENST00000637494 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
CLN6-221ENST00000637494 MRPS36P82909 103 aaKnown RBP11.93□□□□□ -0.5
CLN6-221ENST00000637494 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
CLN6-221ENST00000637494 SPAG11BQ08648 103 aa11.92□□□□□ -0.5
CLN6-221ENST00000637494 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
CLN6-221ENST00000637494 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
CLN6-221ENST00000637494 PTTG1IPP53801 180 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms