RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C1orf196B1AJZ1 125 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 CCL25O15444 150 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 LINC00614P0C842 121 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 IFI27P40305 119 aaPredicted RBP4.58□□□□□ -1.68
UPF3B-205ENST00000636792 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 PACRGQ96M98 296 aaPredicted RBP4.58□□□□□ -1.68
UPF3B-205ENST00000636792 TIMM17AQ99595 171 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 Q9H8V8 135 aa4.58□□□□□ -1.68
UPF3B-205ENST00000636792 MRPS36P82909 103 aaKnown RBP4.57□□□□□ -1.68
UPF3B-205ENST00000636792 COA6Q5JTJ3 125 aaKnown RBP4.57□□□□□ -1.68
UPF3B-205ENST00000636792 AMMECR1LQ6DCA0 310 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 C2orf66Q6UXQ4 117 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 NFE4Q86UQ8 179 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 WFDC10BQ8IUB3 73 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 TOMM6Q96B49 74 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 RMI2Q96E14 147 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 COX11Q9Y6N1 276 aa4.57□□□□□ -1.68
UPF3B-205ENST00000636792 TRAV8-3A0A0A6YYJ7 113 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 TRAV8-4A0A0B4J246 113 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 NBDYA0A0U1RRE5 68 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 LOC389332A0A1B0GUA5 103 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 IBA57-AS1B1ANH7 110 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BKO60814 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HSBP1O75506 76 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 LY6G6CO95867 125 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HBDP02042 147 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 CRPP02741 224 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BJP06899 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 FGF6P10767 208 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BOP23527 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BBP33778 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BDP58876 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BCP62807 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 MIAQ16674 131 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST2H2BEQ16778 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.56□□□□□ -1.68
UPF3B-205ENST00000636792 DGAT2L7PQ6IED9 249 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 Q6ZN92 141 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 ERASQ7Z444 233 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 BAGE3Q86Y29 109 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 OR5A1Q8NGJ0 315 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BHQ93079 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 TMEM141Q96I45 108 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BNQ99877 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 HIST1H2BMQ99879 126 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 PRR34Q9NV39 138 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 UBE2D4Q9Y2X8 147 aa4.56□□□□□ -1.68
UPF3B-205ENST00000636792 ATP5LO75964 103 aa4.55□□□□□ -1.68
UPF3B-205ENST00000636792 RBX1P62877 108 aa4.55□□□□□ -1.68
UPF3B-205ENST00000636792 RNASEKQ6P5S7 137 aaKnown RBP4.55□□□□□ -1.68
UPF3B-205ENST00000636792 Q6ZR54 194 aa4.55□□□□□ -1.68
UPF3B-205ENST00000636792 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.54□□□□□ -1.68
UPF3B-205ENST00000636792 IGKV2-29A2NJV5 120 aaPredicted RBP4.54□□□□□ -1.68
UPF3B-205ENST00000636792 TMEM262E9PQX1 116 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 ANGP03950 147 aaKnown RBP4.54□□□□□ -1.68
UPF3B-205ENST00000636792 SEC11AP67812 179 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 GAGE6Q13070 117 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 ZNF664Q8N3J9 261 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 URB1-AS1Q96HZ7 61 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 C2orf88Q9BSF0 95 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 TM2D2Q9BX73 214 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
UPF3B-205ENST00000636792 IGLV4-3A0A075B6K6 122 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 A0A096LNJ9 63 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 IGIPA6NJ69 53 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.53□□□□□ -1.68
UPF3B-205ENST00000636792 SERF1AO75920 110 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 S100A6P06703 90 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 AKR1D1P51857 326 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 REG3AQ06141 175 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 PDZD11Q5EBL8 140 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 TEX43Q6ZNM6 134 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 HSPB8Q9UJY1 196 aa4.53□□□□□ -1.68
UPF3B-205ENST00000636792 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 LEPROTL1O95214 131 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 IGHV3-30-3P0DP02 117 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
UPF3B-205ENST00000636792 Q6ZUT4 128 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 C6orf223Q8N319 242 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 Q8N976 141 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 SCGB3A1Q96QR1 104 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 AMELXQ99217 191 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 C1orf43Q9BWL3 253 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 KLK12Q9UKR0 248 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
UPF3B-205ENST00000636792 DNAH6Q9C0G6 4158 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 TRAV12-1A0A0B4J245 112 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 SS18Q15532 418 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 C1orf134Q5TEV5 83 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 LINC00336Q6ZUF6 198 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 LINC01561Q8N1V8 128 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 LINC00269Q8N2A0 174 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 UBE2WQ96B02 151 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms