RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 RPL13AP40429 203 aaKnown RBP7.7□□□□□ -1.18
PSPC1-207ENST00000635251 HERVK_113P63121 156 aa7.7□□□□□ -1.18
PSPC1-207ENST00000635251 COX6A2Q02221 97 aa7.7□□□□□ -1.18
PSPC1-207ENST00000635251 LRRC75A-AS1Q8N1F1 130 aa7.7□□□□□ -1.18
PSPC1-207ENST00000635251 TRAV25A0A0B4J276 109 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 C2orf82Q6UX34 121 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 ZNF625Q96I27 306 aaPredicted RBP7.69□□□□□ -1.18
PSPC1-207ENST00000635251 BAHCC1Q9P281 2608 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 PRRC2AP48634 2157 aaKnown RBP7.69□□□□□ -1.18
PSPC1-207ENST00000635251 USP9XQ93008 2570 aaPredicted RBP7.69□□□□□ -1.18
PSPC1-207ENST00000635251 IGLV5-45A0A087WSX0 123 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 TRAV13-1A0A0B4J241 112 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 K7EQD1 137 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.69□□□□□ -1.18
PSPC1-207ENST00000635251 Q9H8V8 135 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 CFAP46Q8IYW2 2715 aa7.69□□□□□ -1.18
PSPC1-207ENST00000635251 FAM208BQ5VWN6 2430 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 A0A0U1RRA0 63 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 TEX49A0A1B0GTD5 131 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 GAGE12JA6NER3 117 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 LINC00694P0DN24 101 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 GAGE4Q13068 117 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 GAGE5Q13069 117 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 Q6ZTI0 123 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 CLEC2BQ92478 149 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 UBE2WQ96B02 151 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 ANKRD17O75179 2603 aaKnown RBP7.68□□□□□ -1.18
PSPC1-207ENST00000635251 CCL24O00175 119 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 NDUFA7O95182 113 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 TMEM86BQ8N661 226 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 RNF183Q96D59 192 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 BBC3Q96PG8 261 aaPredicted RBP7.68□□□□□ -1.18
PSPC1-207ENST00000635251 ZFYVE26Q68DK2 2539 aa7.68□□□□□ -1.18
PSPC1-207ENST00000635251 TRAV8-4A0A0B4J246 113 aa7.67□□□□□ -1.18
PSPC1-207ENST00000635251 DNAJC9-AS1A6NH13 148 aa7.67□□□□□ -1.18
PSPC1-207ENST00000635251 PF4P02776 101 aa7.67□□□□□ -1.18
PSPC1-207ENST00000635251 IL17DQ8TAD2 202 aa7.67□□□□□ -1.18
PSPC1-207ENST00000635251 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
PSPC1-207ENST00000635251 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
PSPC1-207ENST00000635251 MEIG1Q5JSS6 88 aa7.67□□□□□ -1.18
PSPC1-207ENST00000635251 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
PSPC1-207ENST00000635251 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
PSPC1-207ENST00000635251 UTP20O75691 2785 aaKnown RBP7.67□□□□□ -1.18
PSPC1-207ENST00000635251 FLNCQ14315 2725 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 TRAV4A0A0B4J268 109 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 H7C423 109 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 UBE2L6O14933 153 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 LINC00308Q8TCZ7 52 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 NOP10Q9NPE3 64 aaKnown RBP7.66□□□□□ -1.18
PSPC1-207ENST00000635251 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 HERV-K104P63124 156 aa7.66□□□□□ -1.18
PSPC1-207ENST00000635251 IGSF10Q6WRI0 2623 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 H3BT86 120 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 LST1O00453 97 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 SNCGO76070 127 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 PRIMA1Q86XR5 153 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 ZNF843Q8N446 348 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 TEX29Q8N6K0 151 aa7.65□□□□□ -1.18
PSPC1-207ENST00000635251 CSDC2Q9Y534 153 aaKnown RBP7.65□□□□□ -1.18
PSPC1-207ENST00000635251 COPS9Q8WXC6 57 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 FBN2P35556 2912 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 FASNP49327 2511 aaKnown RBP7.64□□□□□ -1.19
PSPC1-207ENST00000635251 TRGV2A0A075B6R0 118 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 FAM19A3Q7Z5A8 133 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
PSPC1-207ENST00000635251 CREBBPQ92793 2442 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 USP9YO00507 2555 aaPredicted RBP7.63□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE7O76087 117 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE12FP0CL80 117 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE12GP0CL81 117 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE12IP0CL82 117 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 FAM110AQ9BQ89 295 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 POLQO75417 2590 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 RPL35AP18077 110 aaKnown RBP7.63□□□□□ -1.19
PSPC1-207ENST00000635251 WFDC11Q8NEX6 87 aa7.63□□□□□ -1.19
PSPC1-207ENST00000635251 CMC4P56277 68 aaPredicted RBP7.62□□□□□ -1.19
PSPC1-207ENST00000635251 C16orf74Q96GX8 76 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 ANAPC13Q9BS18 74 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 ESM1Q9NQ30 184 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE2BQ13066 116 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 WFDC10AQ9H1F0 79 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 ZANQ9Y493 2812 aa7.62□□□□□ -1.19
PSPC1-207ENST00000635251 TRGV4A0A0C4DH28 118 aa7.61□□□□□ -1.19
PSPC1-207ENST00000635251 LOC100131303A0A0U1RQF7 123 aa7.61□□□□□ -1.19
PSPC1-207ENST00000635251 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
PSPC1-207ENST00000635251 TRAV26-1A0A087WT03 109 aa7.61□□□□□ -1.19
PSPC1-207ENST00000635251 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
PSPC1-207ENST00000635251 F5H768 121 aa7.61□□□□□ -1.19
PSPC1-207ENST00000635251 COX7A2LO14548 114 aa7.6□□□□□ -1.19
PSPC1-207ENST00000635251 CRLF1O75462 422 aa7.6□□□□□ -1.19
PSPC1-207ENST00000635251 C15orf53Q8NAA6 179 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms