RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 EDA2RQ9HAV5 297 aa13.03□□□□□ -0.32
CCNL1-226ENST00000631619 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
CCNL1-226ENST00000631619 A8MTW9 85 aa13.03□□□□□ -0.32
CCNL1-226ENST00000631619 FAM104AQ969W3 186 aa13.03□□□□□ -0.32
CCNL1-226ENST00000631619 CHCHD5Q9BSY4 110 aa13.03□□□□□ -0.32
CCNL1-226ENST00000631619 TMEM126AQ9H061 195 aa13.03□□□□□ -0.32
CCNL1-226ENST00000631619 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
CCNL1-226ENST00000631619 Q9UF83 564 aa13.02□□□□□ -0.33
CCNL1-226ENST00000631619 NDUFA12Q9UI09 145 aa13.02□□□□□ -0.33
CCNL1-226ENST00000631619 TLN2Q9Y4G6 2542 aa13.01□□□□□ -0.33
CCNL1-226ENST00000631619 TMEM61Q8N0U2 210 aa13.01□□□□□ -0.33
CCNL1-226ENST00000631619 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
CCNL1-226ENST00000631619 IGHV1-58A0A0C4DH39 117 aa13.01□□□□□ -0.33
CCNL1-226ENST00000631619 TRAV8-3A0A0A6YYJ7 113 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 KRTAP10-9P60411 292 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 PYGO1Q9Y3Y4 419 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 CD28P10747 220 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 Q6ZSV7 163 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 ZNF843Q8N446 348 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 LINC01587Q99440 93 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 TNFRSF18Q9Y5U5 241 aa13□□□□□ -0.33
CCNL1-226ENST00000631619 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
CCNL1-226ENST00000631619 Q6ZSN1 163 aa12.99□□□□□ -0.33
CCNL1-226ENST00000631619 Q8N2B8 174 aa12.99□□□□□ -0.33
CCNL1-226ENST00000631619 YAE1D1Q9NRH1 226 aa12.99□□□□□ -0.33
CCNL1-226ENST00000631619 UBR5O95071 2799 aaPredicted RBP12.98□□□□□ -0.33
CCNL1-226ENST00000631619 IMUPQ9GZP8 106 aa12.98□□□□□ -0.33
CCNL1-226ENST00000631619 ACYP1P07311 99 aa12.97□□□□□ -0.33
CCNL1-226ENST00000631619 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
CCNL1-226ENST00000631619 VSIG2Q96IQ7 327 aa12.97□□□□□ -0.33
CCNL1-226ENST00000631619 NPC2P61916 151 aa12.97□□□□□ -0.33
CCNL1-226ENST00000631619 ZNF469Q96JG9 3925 aaPredicted RBP12.97□□□□□ -0.33
CCNL1-226ENST00000631619 MAP6D1Q9H9H5 199 aa12.96□□□□□ -0.33
CCNL1-226ENST00000631619 CHD6Q8TD26 2715 aa12.96□□□□□ -0.34
CCNL1-226ENST00000631619 FAM236AA0A1B0GUQ0 79 aa12.96□□□□□ -0.34
CCNL1-226ENST00000631619 FAM236BA0A1B0GV22 79 aa12.96□□□□□ -0.34
CCNL1-226ENST00000631619 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.34
CCNL1-226ENST00000631619 PEMTQ9UBM1 199 aa12.96□□□□□ -0.34
CCNL1-226ENST00000631619 ZNF415Q09FC8 603 aa12.95□□□□□ -0.34
CCNL1-226ENST00000631619 C4orf3Q8WVX3 66 aa12.95□□□□□ -0.34
CCNL1-226ENST00000631619 TIMM17BO60830 172 aa12.95□□□□□ -0.34
CCNL1-226ENST00000631619 PIK3CD-AS1Q5SR53 167 aa12.95□□□□□ -0.34
CCNL1-226ENST00000631619 C11orf72Q8NBR9 251 aa12.95□□□□□ -0.34
CCNL1-226ENST00000631619 AKAP9Q99996 3911 aa12.94□□□□□ -0.34
CCNL1-226ENST00000631619 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
CCNL1-226ENST00000631619 TINCRA0A1B0GVN0 87 aa12.94□□□□□ -0.34
CCNL1-226ENST00000631619 KHDC1LQ5JSQ8 128 aa12.94□□□□□ -0.34
CCNL1-226ENST00000631619 CHCHD7Q9BUK0 85 aa12.94□□□□□ -0.34
CCNL1-226ENST00000631619 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
CCNL1-226ENST00000631619 C3orf56Q8N813 242 aa12.93□□□□□ -0.34
CCNL1-226ENST00000631619 A8MZ25 164 aa12.92□□□□□ -0.34
CCNL1-226ENST00000631619 DEFB114Q30KQ6 69 aa12.92□□□□□ -0.34
CCNL1-226ENST00000631619 DYNLRB2Q8TF09 96 aa12.92□□□□□ -0.34
CCNL1-226ENST00000631619 UBE2D4Q9Y2X8 147 aa12.92□□□□□ -0.34
CCNL1-226ENST00000631619 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
CCNL1-226ENST00000631619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.9□□□□□ -0.34
CCNL1-226ENST00000631619 IGKV2-29A2NJV5 120 aaPredicted RBP12.9□□□□□ -0.34
CCNL1-226ENST00000631619 NF1P21359 2839 aa12.9□□□□□ -0.34
CCNL1-226ENST00000631619 IGHV3-53P01767 116 aa12.9□□□□□ -0.34
CCNL1-226ENST00000631619 LINC00467Q9BRT7 94 aa12.9□□□□□ -0.34
CCNL1-226ENST00000631619 IGHV3-38A0A0C4DH36 116 aa12.89□□□□□ -0.35
CCNL1-226ENST00000631619 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
CCNL1-226ENST00000631619 LINC00643Q86TS7 51 aa12.89□□□□□ -0.35
CCNL1-226ENST00000631619 Q96MF0 132 aa12.89□□□□□ -0.35
CCNL1-226ENST00000631619 CITED2Q99967 270 aaPredicted RBP12.89□□□□□ -0.35
CCNL1-226ENST00000631619 APCP25054 2843 aa12.89□□□□□ -0.35
CCNL1-226ENST00000631619 INSP01308 110 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 C3orf22Q8N5N4 141 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 SMCR5Q8TEV8 140 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 DAND5Q8N907 189 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 PPDPFQ9H3Y8 114 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 ITPR3Q14573 2671 aa12.88□□□□□ -0.35
CCNL1-226ENST00000631619 COX7A2LO14548 114 aa12.87□□□□□ -0.35
CCNL1-226ENST00000631619 NDUFA1O15239 70 aa12.87□□□□□ -0.35
CCNL1-226ENST00000631619 CUBNO60494 3623 aa12.87□□□□□ -0.35
CCNL1-226ENST00000631619 UQCRQO14949 82 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 RS1O15537 224 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 ATP5G1P05496 136 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 NDUFA7O95182 113 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 KRTAP1-3Q8IUG1 177 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 DNAJC30Q96LL9 226 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 NOTCH3Q9UM47 2321 aa12.86□□□□□ -0.35
CCNL1-226ENST00000631619 NBPF19A0A087WUL8 3843 aa12.85□□□□□ -0.35
CCNL1-226ENST00000631619 SDIM1Q6ZPB5 146 aa12.85□□□□□ -0.35
CCNL1-226ENST00000631619 LRRC75A-AS1Q8N1F1 130 aa12.85□□□□□ -0.35
CCNL1-226ENST00000631619 CIRBPQ14011 172 aaKnown RBP12.85□□□□□ -0.35
CCNL1-226ENST00000631619 TENM4Q6N022 2769 aa12.84□□□□□ -0.35
CCNL1-226ENST00000631619 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
CCNL1-226ENST00000631619 LINC00694P0DN24 101 aa12.83□□□□□ -0.36
CCNL1-226ENST00000631619 LINC00526Q96FQ7 95 aa12.83□□□□□ -0.36
CCNL1-226ENST00000631619 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
CCNL1-226ENST00000631619 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
CCNL1-226ENST00000631619 KMT2BQ9UMN6 2715 aaPredicted RBP12.83□□□□□ -0.36
CCNL1-226ENST00000631619 SETD2Q9BYW2 2564 aaPredicted RBP12.83□□□□□ -0.36
CCNL1-226ENST00000631619 CCDC168Q8NDH2 2452 aa12.82□□□□□ -0.36
CCNL1-226ENST00000631619 CXCL5P42830 114 aa12.82□□□□□ -0.36
CCNL1-226ENST00000631619 DAZ2Q13117 558 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms