RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 H3BMG7 143 aa12.62□□□□□ -0.39
ZNF48-206ENST00000622647 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
ZNF48-206ENST00000622647 TRRAPQ9Y4A5 3859 aa12.62□□□□□ -0.39
ZNF48-206ENST00000622647 MRPS36P82909 103 aaKnown RBP12.62□□□□□ -0.39
ZNF48-206ENST00000622647 C10orf126Q8N4M7 172 aa12.62□□□□□ -0.39
ZNF48-206ENST00000622647 TRAV4A0A0B4J268 109 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 DEFB130BP0DP73 79 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 DEFB130AP0DP74 79 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 SPANXA1Q9NS26 97 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 CMC4P56277 68 aaPredicted RBP12.61□□□□□ -0.39
ZNF48-206ENST00000622647 NPC2P61916 151 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 RBX1P62877 108 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 COX6A2Q02221 97 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 NDUFA11Q86Y39 141 aa12.61□□□□□ -0.39
ZNF48-206ENST00000622647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.61□□□□□ -0.39
ZNF48-206ENST00000622647 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
ZNF48-206ENST00000622647 GEMIN7Q9H840 131 aaKnown RBP12.6□□□□□ -0.39
ZNF48-206ENST00000622647 CDKN2A-AS1Q9UH64 79 aa12.6□□□□□ -0.39
ZNF48-206ENST00000622647 TRAV13-1A0A0B4J241 112 aa12.59□□□□□ -0.39
ZNF48-206ENST00000622647 TRGV4A0A0C4DH28 118 aa12.59□□□□□ -0.39
ZNF48-206ENST00000622647 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
ZNF48-206ENST00000622647 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
ZNF48-206ENST00000622647 OR5A1Q8NGJ0 315 aa12.59□□□□□ -0.39
ZNF48-206ENST00000622647 CRLF1O75462 422 aa12.59□□□□□ -0.39
ZNF48-206ENST00000622647 A0A1B0GWB2 263 aa12.58□□□□□ -0.4
ZNF48-206ENST00000622647 H7C2G1 150 aa12.58□□□□□ -0.4
ZNF48-206ENST00000622647 DAZ2Q13117 558 aaKnown RBP12.58□□□□□ -0.4
ZNF48-206ENST00000622647 FLNBO75369 2602 aaKnown RBP12.58□□□□□ -0.4
ZNF48-206ENST00000622647 TMEM238LA0A1B0GVL6 79 aa12.58□□□□□ -0.4
ZNF48-206ENST00000622647 A6NJY4 79 aa12.58□□□□□ -0.4
ZNF48-206ENST00000622647 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
ZNF48-206ENST00000622647 C1QTNF4Q9BXJ3 329 aa12.58□□□□□ -0.4
ZNF48-206ENST00000622647 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 CFC1P0CG37 223 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 UBE2D1P51668 147 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 UBE2D3P61077 147 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 UBE2D2P62837 147 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
ZNF48-206ENST00000622647 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 A0A0J9YXY3 114 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 TSPAN13O95857 204 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 PRSS2P07478 247 aa12.57□□□□□ -0.4
ZNF48-206ENST00000622647 TINCRA0A1B0GVN0 87 aa12.56□□□□□ -0.4
ZNF48-206ENST00000622647 A4D1N5 150 aa12.56□□□□□ -0.4
ZNF48-206ENST00000622647 DEFB4AO15263 64 aa12.56□□□□□ -0.4
ZNF48-206ENST00000622647 RPL24P83731 157 aaKnown RBP12.56□□□□□ -0.4
ZNF48-206ENST00000622647 WFDC2Q14508 124 aa12.56□□□□□ -0.4
ZNF48-206ENST00000622647 IGHV1-58A0A0C4DH39 117 aa12.55□□□□□ -0.4
ZNF48-206ENST00000622647 NDUFA12Q9UI09 145 aa12.55□□□□□ -0.4
ZNF48-206ENST00000622647 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
ZNF48-206ENST00000622647 SPANXB1Q9NS25 103 aaPredicted RBP12.55□□□□□ -0.4
ZNF48-206ENST00000622647 A0A0U1RRA0 63 aa12.55□□□□□ -0.4
ZNF48-206ENST00000622647 ADAMTSL4-AS1Q5T5F5 129 aa12.55□□□□□ -0.4
ZNF48-206ENST00000622647 DAND5Q8N907 189 aa12.55□□□□□ -0.4
ZNF48-206ENST00000622647 VSIG2Q96IQ7 327 aa12.55□□□□□ -0.4
ZNF48-206ENST00000622647 EIF4EBP3O60516 100 aaPredicted RBP12.54□□□□□ -0.4
ZNF48-206ENST00000622647 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
ZNF48-206ENST00000622647 VPS25Q9BRG1 176 aa12.54□□□□□ -0.4
ZNF48-206ENST00000622647 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
ZNF48-206ENST00000622647 PSMB2P49721 201 aa12.53□□□□□ -0.4
ZNF48-206ENST00000622647 DAZ4Q86SG3 579 aaKnown RBP12.53□□□□□ -0.4
ZNF48-206ENST00000622647 DAZ3Q9NR90 486 aaKnown RBP12.53□□□□□ -0.4
ZNF48-206ENST00000622647 CRYBA4P53673 196 aa12.53□□□□□ -0.4
ZNF48-206ENST00000622647 GAGE6Q13070 117 aa12.53□□□□□ -0.4
ZNF48-206ENST00000622647 LINC00242Q5T6M2 205 aa12.53□□□□□ -0.4
ZNF48-206ENST00000622647 UBE2L6O14933 153 aa12.52□□□□□ -0.41
ZNF48-206ENST00000622647 FHL2Q14192 279 aa12.52□□□□□ -0.41
ZNF48-206ENST00000622647 SH2D6Q7Z4S9 175 aa12.52□□□□□ -0.41
ZNF48-206ENST00000622647 TMEM101Q96IK0 257 aa12.52□□□□□ -0.41
ZNF48-206ENST00000622647 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.41
ZNF48-206ENST00000622647 A0A096LPF7 62 aa12.51□□□□□ -0.41
ZNF48-206ENST00000622647 TMEM243Q9BU79 118 aa12.5□□□□□ -0.41
ZNF48-206ENST00000622647 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 TMEM238C9JI98 176 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 K7ERU9 68 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 LITAFQ99732 161 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 CDC42SE2Q9NRR3 84 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 F8P00451 2351 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
ZNF48-206ENST00000622647 ETDBQ3ZM63 59 aa12.48□□□□□ -0.41
ZNF48-206ENST00000622647 CBY1Q9Y3M2 126 aa12.48□□□□□ -0.41
ZNF48-206ENST00000622647 SCGB1C2P0DMR2 95 aa12.48□□□□□ -0.41
ZNF48-206ENST00000622647 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
ZNF48-206ENST00000622647 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
ZNF48-206ENST00000622647 X6R8D5 127 aa12.47□□□□□ -0.41
ZNF48-206ENST00000622647 IGLV4-60A0A075B6I1 120 aa12.46□□□□□ -0.41
ZNF48-206ENST00000622647 TIRAPP58753 221 aa12.46□□□□□ -0.41
ZNF48-206ENST00000622647 Q1RN00 199 aa12.45□□□□□ -0.42
ZNF48-206ENST00000622647 C9orf66Q5T8R8 295 aa12.45□□□□□ -0.42
ZNF48-206ENST00000622647 Q9H8V8 135 aa12.45□□□□□ -0.42
ZNF48-206ENST00000622647 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
ZNF48-206ENST00000622647 TCL1BO95988 128 aa12.45□□□□□ -0.42
ZNF48-206ENST00000622647 HERVK_113P63121 156 aa12.45□□□□□ -0.42
ZNF48-206ENST00000622647 GYPEP15421 78 aa12.44□□□□□ -0.42
ZNF48-206ENST00000622647 FAM222AQ5U5X8 452 aa12.44□□□□□ -0.42
ZNF48-206ENST00000622647 F8W1H4 67 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms