RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 PLAC8Q9NZF1 115 aa15.23■□□□□ 0.03
ATXN3-253ENST00000621269 SS18Q15532 418 aa15.22■□□□□ 0.03
ATXN3-253ENST00000621269 TMEM241Q24JQ0 296 aa15.22■□□□□ 0.03
ATXN3-253ENST00000621269 V9GYV3 84 aa15.22■□□□□ 0.03
ATXN3-253ENST00000621269 MAJINQ3KP22 176 aa15.21■□□□□ 0.03
ATXN3-253ENST00000621269 FAM74A3Q4VXF1 159 aa15.21■□□□□ 0.03
ATXN3-253ENST00000621269 MRPL52Q86TS9 123 aaKnown RBP15.21■□□□□ 0.03
ATXN3-253ENST00000621269 NUP35Q8NFH5 326 aa15.21■□□□□ 0.03
ATXN3-253ENST00000621269 PRSS3P2Q8NHM4 247 aa15.21■□□□□ 0.03
ATXN3-253ENST00000621269 C7orf33Q8WU49 177 aa15.21■□□□□ 0.03
ATXN3-253ENST00000621269 IGKV2-24A0A0C4DH68 120 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 C7orf77A4D0Y5 90 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 VCYO14598 125 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 PPP1R17O96001 155 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 FCER1GP30273 86 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 Q6ZRU5 148 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 ISOC2Q96AB3 205 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 CDC42SE2Q9NRR3 84 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 NAT8BQ9UHF3 227 aa15.2■□□□□ 0.02
ATXN3-253ENST00000621269 FAT3Q8TDW7 4589 aa15.19■□□□□ 0.02
ATXN3-253ENST00000621269 IGHV1-58A0A0C4DH39 117 aa15.19■□□□□ 0.02
ATXN3-253ENST00000621269 SMKR1H3BMG3 65 aa15.19■□□□□ 0.02
ATXN3-253ENST00000621269 ZNF664Q8N3J9 261 aa15.19■□□□□ 0.02
ATXN3-253ENST00000621269 RPL23P62829 140 aaKnown RBP15.17■□□□□ 0.02
ATXN3-253ENST00000621269 PKIGQ9Y2B9 76 aa15.17■□□□□ 0.02
ATXN3-253ENST00000621269 PKHD1L1Q86WI1 4243 aa15.17■□□□□ 0.02
ATXN3-253ENST00000621269 PHOX2AO14813 284 aa15.16■□□□□ 0.02
ATXN3-253ENST00000621269 SMAGPQ0VAQ4 97 aa15.16■□□□□ 0.02
ATXN3-253ENST00000621269 ADIRFQ15847 76 aa15.16■□□□□ 0.02
ATXN3-253ENST00000621269 CD164L2Q6UWJ8 174 aa15.16■□□□□ 0.02
ATXN3-253ENST00000621269 STPG4Q8N801 248 aa15.16■□□□□ 0.02
ATXN3-253ENST00000621269 SUMO2P61956 95 aaKnown RBP15.15■□□□□ 0.02
ATXN3-253ENST00000621269 KIR2DL4Q99706 377 aa15.15■□□□□ 0.02
ATXN3-253ENST00000621269 LINC00474Q9P2X8 69 aa15.15■□□□□ 0.02
ATXN3-253ENST00000621269 NAT8Q9UHE5 227 aa15.15■□□□□ 0.02
ATXN3-253ENST00000621269 ZNF561-AS1K7EIQ3 104 aa15.14■□□□□ 0.01
ATXN3-253ENST00000621269 NRACQ8N912 160 aa15.14■□□□□ 0.01
ATXN3-253ENST00000621269 LINC00526Q96FQ7 95 aa15.14■□□□□ 0.01
ATXN3-253ENST00000621269 CARD19Q96LW7 228 aa15.14■□□□□ 0.01
ATXN3-253ENST00000621269 A0A096LNI7 61 aa15.13■□□□□ 0.01
ATXN3-253ENST00000621269 PPP1R2P9O14990 202 aa15.13■□□□□ 0.01
ATXN3-253ENST00000621269 C1orf196B1AJZ1 125 aa15.12■□□□□ 0.01
ATXN3-253ENST00000621269 PEA15Q15121 130 aa15.12■□□□□ 0.01
ATXN3-253ENST00000621269 FAM104BQ5XKR9 115 aa15.12■□□□□ 0.01
ATXN3-253ENST00000621269 PLA2G2DQ9UNK4 145 aa15.12■□□□□ 0.01
ATXN3-253ENST00000621269 CSDC2Q9Y534 153 aaKnown RBP15.12■□□□□ 0.01
ATXN3-253ENST00000621269 A0A1B0GVG6 124 aa15.11■□□□□ 0.01
ATXN3-253ENST00000621269 SMIM27A0A1W2PRY6 76 aa15.11■□□□□ 0.01
ATXN3-253ENST00000621269 MALP21145 153 aa15.11■□□□□ 0.01
ATXN3-253ENST00000621269 CAMPP49913 170 aa15.11■□□□□ 0.01
ATXN3-253ENST00000621269 MRPL51Q4U2R6 128 aaKnown RBP15.11■□□□□ 0.01
ATXN3-253ENST00000621269 UBE2D4Q9Y2X8 147 aa15.11■□□□□ 0.01
ATXN3-253ENST00000621269 C9JQL5 133 aa15.1■□□□□ 0.01
ATXN3-253ENST00000621269 SYCNQ0VAF6 134 aa15.1■□□□□ 0.01
ATXN3-253ENST00000621269 TMEM18Q96B42 140 aa15.1■□□□□ 0.01
ATXN3-253ENST00000621269 A0A1B0GW15 77 aa15.09■□□□□ 0.01
ATXN3-253ENST00000621269 LINC00862A6NCI5 91 aa15.09■□□□□ 0.01
ATXN3-253ENST00000621269 COX7A2LO14548 114 aa15.09■□□□□ 0.01
ATXN3-253ENST00000621269 CKS2P33552 79 aa15.08■□□□□ 0
ATXN3-253ENST00000621269 C20orf78Q9BR46 151 aa15.08■□□□□ 0
ATXN3-253ENST00000621269 SRSF3P84103 164 aaKnown RBP15.07■□□□□ 0
ATXN3-253ENST00000621269 RNASE13Q5GAN3 156 aaKnown RBP15.07■□□□□ 0
ATXN3-253ENST00000621269 SMDT1Q9H4I9 107 aa15.07■□□□□ 0
ATXN3-253ENST00000621269 HMCN2Q8NDA2 5059 aa15.06■□□□□ 0
ATXN3-253ENST00000621269 TRAV13-1A0A0B4J241 112 aa15.06■□□□□ 0
ATXN3-253ENST00000621269 MT1HL1P0DM35 61 aa15.06■□□□□ 0
ATXN3-253ENST00000621269 IGLV4-69A0A075B6H9 119 aa15.05■□□□□ -0
ATXN3-253ENST00000621269 TCAPO15273 167 aa15.05■□□□□ -0
ATXN3-253ENST00000621269 PRR3P79522 188 aaKnown RBP15.05■□□□□ -0
ATXN3-253ENST00000621269 TIMM21Q9BVV7 248 aa15.05■□□□□ -0
ATXN3-253ENST00000621269 TRBV24-1A0A075B6N3 115 aa15.04■□□□□ -0
ATXN3-253ENST00000621269 S100A8P05109 93 aa15.04■□□□□ -0
ATXN3-253ENST00000621269 F8W036 122 aa15.03■□□□□ -0
ATXN3-253ENST00000621269 TNFRSF6BO95407 300 aa15.03■□□□□ -0
ATXN3-253ENST00000621269 RPL32P62910 135 aaKnown RBP15.03■□□□□ -0
ATXN3-253ENST00000621269 Q6ZUT4 128 aa15.03■□□□□ -0
ATXN3-253ENST00000621269 LOC107984640A0A0U1RRK4 108 aa15.02■□□□□ -0
ATXN3-253ENST00000621269 MRPL54Q6P161 138 aaKnown RBP15.02■□□□□ -0
ATXN3-253ENST00000621269 APOMO95445 188 aa15.01□□□□□ -0.01
ATXN3-253ENST00000621269 HBBP68871 147 aa15.01□□□□□ -0.01
ATXN3-253ENST00000621269 GAGE2BQ13066 116 aa15.01□□□□□ -0.01
ATXN3-253ENST00000621269 C5orf38Q86SI9 138 aa15.01□□□□□ -0.01
ATXN3-253ENST00000621269 CAMK2N2Q96S95 79 aa15.01□□□□□ -0.01
ATXN3-253ENST00000621269 D6R8Y8 96 aa15□□□□□ -0.01
ATXN3-253ENST00000621269 PTTG1IPP53801 180 aa15□□□□□ -0.01
ATXN3-253ENST00000621269 SMIM2Q9BVW6 85 aa14.99□□□□□ -0.01
ATXN3-253ENST00000621269 RPL39P62891 51 aaKnown RBP14.98□□□□□ -0.01
ATXN3-253ENST00000621269 C2orf48Q96LS8 159 aa14.98□□□□□ -0.01
ATXN3-253ENST00000621269 PPBPP02775 128 aa14.97□□□□□ -0.01
ATXN3-253ENST00000621269 A0A1B0GXF2 115 aa14.96□□□□□ -0.01
ATXN3-253ENST00000621269 NPYP01303 97 aa14.96□□□□□ -0.01
ATXN3-253ENST00000621269 Q6ZRP5 223 aa14.96□□□□□ -0.01
ATXN3-253ENST00000621269 SPANXA1Q9NS26 97 aa14.96□□□□□ -0.01
ATXN3-253ENST00000621269 SPAG11BQ08648 103 aa14.95□□□□□ -0.02
ATXN3-253ENST00000621269 SPINK6Q6UWN8 80 aa14.94□□□□□ -0.02
ATXN3-253ENST00000621269 OR10D4PQ8NGN7 298 aa14.94□□□□□ -0.02
ATXN3-253ENST00000621269 LINC01600Q96MT4 127 aa14.94□□□□□ -0.02
ATXN3-253ENST00000621269 RAB5AP20339 215 aa14.92□□□□□ -0.02
ATXN3-253ENST00000621269 MRPS36P82909 103 aaKnown RBP14.92□□□□□ -0.02
ATXN3-253ENST00000621269 RPL18AQ02543 176 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms