RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 GFRA4Q9GZZ7 299 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 LRP1BQ9NZR2 4599 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 CBY1Q9Y3M2 126 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 TRAV9-2A0A087WT02 112 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 C20orf202A1L168 122 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 UBE2D3P61077 147 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 UBE2D2P62837 147 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 RBX1P62877 108 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 PRELID3AQ96N28 172 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 TMEM243Q9BU79 118 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
SYCP1-210ENST00000618516 APCSP02743 223 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 LELP1Q5T871 98 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 NIT1Q86X76 327 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 TMEM70Q9BUB7 260 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 C1orf43Q9BWL3 253 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 MRPS16Q9Y3D3 137 aaKnown RBP3.11□□□□□ -1.91
SYCP1-210ENST00000618516 KIF25-AS1Q9Y6Z4 181 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 PCLOQ9Y6V0 5065 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 TNFRSF6BO95407 300 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 SUMO2P61956 95 aaKnown RBP3.11□□□□□ -1.91
SYCP1-210ENST00000618516 ANKRD39Q53RE8 183 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 UFSP1Q6NVU6 142 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 ZFP2Q6ZN57 461 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 RNF185Q96GF1 192 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 KIR2DL4Q99706 377 aa3.11□□□□□ -1.91
SYCP1-210ENST00000618516 IGHV1-24A0A0C4DH33 117 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 SMIM27A0A1W2PRY6 76 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 M0R143 59 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 FAM104BQ5XKR9 115 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 FAM231DQ6ZW35 169 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 C5orf38Q86SI9 138 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 PRSS3P2Q8NHM4 247 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 MRAP2Q96G30 205 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 IGKV2-24A0A0C4DH68 120 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 CXCL1P09341 107 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 FGF6P10767 208 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 IFI27P40305 119 aaPredicted RBP3.1□□□□□ -1.91
SYCP1-210ENST00000618516 TEX43Q6ZNM6 134 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 TMEM191AQ9H0A3 160 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 APOBP04114 4563 aaKnown RBP3.1□□□□□ -1.91
SYCP1-210ENST00000618516 IGHV3-64A0A075B6Q5 118 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 hDV102S1A0JD36 115 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 MT-ND6P03923 174 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 REG3AQ06141 175 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 Q0VG73 95 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 TTC32Q5I0X7 151 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 ORMDL3Q8N138 153 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 MAPKAPK5-AS1Q8N8E1 139 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 SMIM12Q96EX1 92 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 TOMM7Q9P0U1 55 aa3.1□□□□□ -1.91
SYCP1-210ENST00000618516 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
SYCP1-210ENST00000618516 FABP4P15090 132 aa3.09□□□□□ -1.91
SYCP1-210ENST00000618516 OR5A1Q8NGJ0 315 aa3.09□□□□□ -1.91
SYCP1-210ENST00000618516 MRPL18Q9H0U6 180 aaKnown RBP3.09□□□□□ -1.91
SYCP1-210ENST00000618516 TRAPPC1Q9Y5R8 145 aa3.09□□□□□ -1.91
SYCP1-210ENST00000618516 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.91
SYCP1-210ENST00000618516 I3L3M4 83 aa3.09□□□□□ -1.92
SYCP1-210ENST00000618516 TRGC2P03986 189 aa3.09□□□□□ -1.92
SYCP1-210ENST00000618516 PDZD11Q5EBL8 140 aa3.09□□□□□ -1.92
SYCP1-210ENST00000618516 Q6ZUT4 128 aa3.09□□□□□ -1.92
SYCP1-210ENST00000618516 MYCBP2O75592 4640 aa3.09□□□□□ -1.92
SYCP1-210ENST00000618516 CCL25O15444 150 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 CT83Q5H943 113 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 Q6ZR54 194 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 KRTAP19-1Q8IUB9 90 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 C20orf203Q8NBC4 194 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 TMEM101Q96IK0 257 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 MIEN1Q9BRT3 115 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 IGLV5-52A0A0A0MRZ9 124 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 A0A0J9YXV3 536 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE12HA6NDE8 117 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 DLEU1O43261 78 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 TSHBP01222 138 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 MED14OSP0DP75 135 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 FAM19A2Q8N3H0 131 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 ZNF664Q8N3J9 261 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 ORAOV1Q8WV07 137 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 MALP21145 153 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 LINC01556Q5JQF7 62 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 FA2HQ7L5A8 372 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 SH2D6Q7Z4S9 175 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 C10orf126Q8N4M7 172 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 NRACQ8N912 160 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 PMCHL2Q9BQD1 86 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 MAP1LC3AQ9H492 121 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 DNAH8Q96JB1 4490 aa3.08□□□□□ -1.92
SYCP1-210ENST00000618516 A0A0U1RRA0 63 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 USP17L23D6RBM5 183 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 H3BNG1 76 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 K7EP13 123 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 VCYO14598 125 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 EREGO14944 169 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 CHTF8P0CG12 524 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms