RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 TMEM238C9JI98 176 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 TRBV7-3A0A075B6L6 115 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 LYRM7Q5U5X0 104 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 NEXN-AS1Q8NBZ9 246 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 IGLL5B9A064 214 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 Q9HAA7 133 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 TENM4Q6N022 2769 aa10.82□□□□□ -0.68
TNFRSF11A-206ENST00000617039 IGHV3-30P01768 117 aa10.81□□□□□ -0.68
TNFRSF11A-206ENST00000617039 IGHV3-33P01772 117 aa10.81□□□□□ -0.68
TNFRSF11A-206ENST00000617039 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
TNFRSF11A-206ENST00000617039 IGHV3-30-5P0DP03 117 aa10.81□□□□□ -0.68
TNFRSF11A-206ENST00000617039 CKS1BP61024 79 aa10.81□□□□□ -0.68
TNFRSF11A-206ENST00000617039 PDZD2O15018 2839 aa10.81□□□□□ -0.68
TNFRSF11A-206ENST00000617039 IGLV4-3A0A075B6K6 122 aa10.79□□□□□ -0.68
TNFRSF11A-206ENST00000617039 K7EP34 96 aa10.79□□□□□ -0.68
TNFRSF11A-206ENST00000617039 FAM222AQ5U5X8 452 aa10.79□□□□□ -0.68
TNFRSF11A-206ENST00000617039 CFAP161Q6P656 301 aa10.79□□□□□ -0.68
TNFRSF11A-206ENST00000617039 K7EQD1 137 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 TSHBP01222 138 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 LINC00694P0DN24 101 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 POLR2KP53803 58 aaKnown RBP10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 VSIG2Q96IQ7 327 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
TNFRSF11A-206ENST00000617039 E9PLD3 99 aa10.77□□□□□ -0.68
TNFRSF11A-206ENST00000617039 LGALS9O00182 355 aa10.77□□□□□ -0.68
TNFRSF11A-206ENST00000617039 DNAL4O96015 105 aa10.77□□□□□ -0.68
TNFRSF11A-206ENST00000617039 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
TNFRSF11A-206ENST00000617039 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF11A-206ENST00000617039 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
TNFRSF11A-206ENST00000617039 CLEC2BQ92478 149 aa10.76□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TRAV26-1A0A087WT03 109 aa10.76□□□□□ -0.69
TNFRSF11A-206ENST00000617039 PIK3CD-AS1Q5SR53 167 aa10.76□□□□□ -0.69
TNFRSF11A-206ENST00000617039 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
TNFRSF11A-206ENST00000617039 IGHV4-4A0A075B6R2 117 aa10.75□□□□□ -0.69
TNFRSF11A-206ENST00000617039 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF11A-206ENST00000617039 RETNQ9HD89 108 aa10.75□□□□□ -0.69
TNFRSF11A-206ENST00000617039 OTOGQ6ZRI0 2925 aa10.75□□□□□ -0.69
TNFRSF11A-206ENST00000617039 VWFP04275 2813 aa10.75□□□□□ -0.69
TNFRSF11A-206ENST00000617039 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
TNFRSF11A-206ENST00000617039 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
TNFRSF11A-206ENST00000617039 CRPP02741 224 aa10.74□□□□□ -0.69
TNFRSF11A-206ENST00000617039 RHOHQ15669 191 aa10.74□□□□□ -0.69
TNFRSF11A-206ENST00000617039 C9orf85Q96MD7 179 aa10.74□□□□□ -0.69
TNFRSF11A-206ENST00000617039 KLK12Q9UKR0 248 aa10.74□□□□□ -0.69
TNFRSF11A-206ENST00000617039 LRRC75A-AS1Q8N1F1 130 aa10.73□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
TNFRSF11A-206ENST00000617039 MORN3Q6PF18 240 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TENM1Q9UKZ4 2725 aa10.73□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
TNFRSF11A-206ENST00000617039 INSL3P51460 131 aa10.72□□□□□ -0.69
TNFRSF11A-206ENST00000617039 NFE4Q86UQ8 179 aa10.72□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
TNFRSF11A-206ENST00000617039 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF11A-206ENST00000617039 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 IGIPA6NJ69 53 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 CFC1BP0CG36 223 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 CFC1P0CG37 223 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 LINC00315P59091 139 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 HILS1P60008 231 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 LINC00269Q8N2A0 174 aa10.7□□□□□ -0.7
TNFRSF11A-206ENST00000617039 SIVA1O15304 175 aa10.69□□□□□ -0.7
TNFRSF11A-206ENST00000617039 SS18Q15532 418 aa10.69□□□□□ -0.7
TNFRSF11A-206ENST00000617039 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
TNFRSF11A-206ENST00000617039 C16orf74Q96GX8 76 aa10.69□□□□□ -0.7
TNFRSF11A-206ENST00000617039 COX6A2Q02221 97 aa10.69□□□□□ -0.7
TNFRSF11A-206ENST00000617039 A0A0J9YXY3 114 aa10.69□□□□□ -0.7
TNFRSF11A-206ENST00000617039 LEPROTO15243 131 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 KIF25-AS1Q9Y6Z4 181 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 BRI3O95415 125 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 ATP5G1P05496 136 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 RBX1P62877 108 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 EDA2RQ9HAV5 297 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 TSPAN13O95857 204 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 MIR7-3HGQ8N6C7 128 aa10.68□□□□□ -0.7
TNFRSF11A-206ENST00000617039 SPATA3Q8NHX4 192 aa10.67□□□□□ -0.7
TNFRSF11A-206ENST00000617039 IGLV4-69A0A075B6H9 119 aa10.67□□□□□ -0.7
TNFRSF11A-206ENST00000617039 SLC25A20O43772 301 aa10.67□□□□□ -0.7
TNFRSF11A-206ENST00000617039 A0A096LNT2 108 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 HERVK_113P63121 156 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 TCL1BO95988 128 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 COX8CQ7Z4L0 72 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 NDUFA11Q86Y39 141 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 Q8N3U1 123 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 TINCRA0A1B0GVN0 87 aa10.66□□□□□ -0.7
TNFRSF11A-206ENST00000617039 IGLV4-60A0A075B6I1 120 aa10.65□□□□□ -0.7
TNFRSF11A-206ENST00000617039 TRAV4A0A0B4J268 109 aa10.65□□□□□ -0.7
TNFRSF11A-206ENST00000617039 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
TNFRSF11A-206ENST00000617039 C9orf66Q5T8R8 295 aa10.65□□□□□ -0.7
TNFRSF11A-206ENST00000617039 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
TNFRSF11A-206ENST00000617039 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms