RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 IGIPA6NJ69 53 aa9.65□□□□□ -0.87
PPP4R3B-206ENST00000616407 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.87
PPP4R3B-206ENST00000616407 LINC00482Q8N8I6 264 aa9.65□□□□□ -0.87
PPP4R3B-206ENST00000616407 IFITM1P13164 125 aa9.64□□□□□ -0.87
PPP4R3B-206ENST00000616407 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
PPP4R3B-206ENST00000616407 TSPAN13O95857 204 aa9.64□□□□□ -0.87
PPP4R3B-206ENST00000616407 KLK9Q2XQG4 91 aa9.64□□□□□ -0.87
PPP4R3B-206ENST00000616407 FLNBO75369 2602 aaKnown RBP9.64□□□□□ -0.87
PPP4R3B-206ENST00000616407 A0A0J9YXY3 114 aa9.63□□□□□ -0.87
PPP4R3B-206ENST00000616407 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
PPP4R3B-206ENST00000616407 HERV-K104P63124 156 aa9.63□□□□□ -0.87
PPP4R3B-206ENST00000616407 PRO0255Q9UI72 69 aa9.63□□□□□ -0.87
PPP4R3B-206ENST00000616407 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
PPP4R3B-206ENST00000616407 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
PPP4R3B-206ENST00000616407 FAM222AQ5U5X8 452 aa9.62□□□□□ -0.87
PPP4R3B-206ENST00000616407 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 A8MZ25 164 aa9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
PPP4R3B-206ENST00000616407 LOC400499M0QZD8 3231 aa9.6□□□□□ -0.87
PPP4R3B-206ENST00000616407 CRYBA4P53673 196 aa9.6□□□□□ -0.87
PPP4R3B-206ENST00000616407 KIF25-AS1Q9Y6Z4 181 aa9.6□□□□□ -0.87
PPP4R3B-206ENST00000616407 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
PPP4R3B-206ENST00000616407 GAGE12HA6NDE8 117 aa9.6□□□□□ -0.87
PPP4R3B-206ENST00000616407 ZNF561-AS1K7EIQ3 104 aa9.6□□□□□ -0.87
PPP4R3B-206ENST00000616407 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
PPP4R3B-206ENST00000616407 C1orf158Q8N1D5 194 aa9.59□□□□□ -0.87
PPP4R3B-206ENST00000616407 LOC100131303A0A0U1RQF7 123 aa9.59□□□□□ -0.88
PPP4R3B-206ENST00000616407 GAGE2BQ13066 116 aa9.59□□□□□ -0.88
PPP4R3B-206ENST00000616407 GAGE2EQ4V326 116 aa9.59□□□□□ -0.88
PPP4R3B-206ENST00000616407 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.88
PPP4R3B-206ENST00000616407 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.88
PPP4R3B-206ENST00000616407 SCGB1A1P11684 91 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 DPH3Q96FX2 82 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 ATMQ13315 3056 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 TRBV6-4A0A1B0GX49 114 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
PPP4R3B-206ENST00000616407 Q8N2B8 174 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 PTH2Q96A98 100 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 IGLV1-51P01701 117 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 RBMY1FQ15415 496 aaKnown RBP9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 MIAQ16674 131 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 MRAPQ8TCY5 172 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 OVOL2Q9BRP0 275 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 CFAP46Q8IYW2 2715 aa9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 FLNAP21333 2647 aaKnown RBP9.57□□□□□ -0.88
PPP4R3B-206ENST00000616407 COX7A2LO14548 114 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 LINC00315P59091 139 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 LINC01620Q4KN68 170 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 Q6ZSN1 163 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 TRAV26-1A0A087WT03 109 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 IGHV3-30P01768 117 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 IGHV3-33P01772 117 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 IGHV3-30-5P0DP03 117 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
PPP4R3B-206ENST00000616407 TRBV6-8A0A0A6YYG3 113 aa9.55□□□□□ -0.88
PPP4R3B-206ENST00000616407 SMIM9A6NGZ8 99 aa9.55□□□□□ -0.88
PPP4R3B-206ENST00000616407 TCL1BO95988 128 aa9.55□□□□□ -0.88
PPP4R3B-206ENST00000616407 TIRAPP58753 221 aa9.55□□□□□ -0.88
PPP4R3B-206ENST00000616407 ZFAND6Q6FIF0 208 aa9.55□□□□□ -0.88
PPP4R3B-206ENST00000616407 NDUFA7O95182 113 aa9.54□□□□□ -0.88
PPP4R3B-206ENST00000616407 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
PPP4R3B-206ENST00000616407 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
PPP4R3B-206ENST00000616407 KLK12Q9UKR0 248 aa9.54□□□□□ -0.88
PPP4R3B-206ENST00000616407 FSHBP01225 129 aa9.54□□□□□ -0.88
PPP4R3B-206ENST00000616407 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
PPP4R3B-206ENST00000616407 LAMTOR3Q9UHA4 124 aa9.53□□□□□ -0.88
PPP4R3B-206ENST00000616407 ITPR3Q14573 2671 aa9.53□□□□□ -0.88
PPP4R3B-206ENST00000616407 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
PPP4R3B-206ENST00000616407 ANAPC13Q9BS18 74 aa9.53□□□□□ -0.88
PPP4R3B-206ENST00000616407 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
PPP4R3B-206ENST00000616407 LINC01546A6NGU7 62 aa9.52□□□□□ -0.88
PPP4R3B-206ENST00000616407 LYRM9A8MSI8 78 aa9.52□□□□□ -0.88
PPP4R3B-206ENST00000616407 A0A0B4J2C4 111 aa9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 UBE2DNLQ8IWF7 75 aa9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 UBE2D3P61077 147 aa9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 UBE2D2P62837 147 aa9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
PPP4R3B-206ENST00000616407 A0A096LNT2 108 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 G3V4G9 280 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 UBE2D1P51668 147 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 IGSF10Q6WRI0 2623 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 USP24Q9UPU5 2620 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 BAALC-AS2P0C853 105 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 Q9HAA7 133 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 EDA2RQ9HAV5 297 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 GHRHP01286 108 aa9.51□□□□□ -0.89
PPP4R3B-206ENST00000616407 FOXI1Q12951 378 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms