RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 A0A087WVE0 104 aa9.66□□□□□ -0.86
MSH6-214ENST00000616033 LMO4P61968 165 aa9.66□□□□□ -0.86
MSH6-214ENST00000616033 SNRPD3P62318 126 aaKnown RBP9.66□□□□□ -0.86
MSH6-214ENST00000616033 C11orf71Q6IPW1 123 aa9.66□□□□□ -0.86
MSH6-214ENST00000616033 Q9H8V8 135 aa9.66□□□□□ -0.86
MSH6-214ENST00000616033 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
MSH6-214ENST00000616033 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
MSH6-214ENST00000616033 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
MSH6-214ENST00000616033 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
MSH6-214ENST00000616033 MIAQ16674 131 aa9.65□□□□□ -0.87
MSH6-214ENST00000616033 Q6ZSN1 163 aa9.65□□□□□ -0.87
MSH6-214ENST00000616033 LITAFQ99732 161 aa9.65□□□□□ -0.87
MSH6-214ENST00000616033 FBN2P35556 2912 aa9.65□□□□□ -0.87
MSH6-214ENST00000616033 KHDC1LQ5JSQ8 128 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 FAM19A4Q96LR4 140 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 CHD6Q8TD26 2715 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 A0A1B0GX51 115 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 TRACP01848 142 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 Q8N2B8 174 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
MSH6-214ENST00000616033 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 LST1O00453 97 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 WFDC11Q8NEX6 87 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 MAPK1IP1LQ8NDC0 245 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
MSH6-214ENST00000616033 PIK3CD-AS1Q5SR53 167 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 A0A0J9YX75 114 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 TRBV6-5A0A0K0K1A5 114 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 UQCRQO14949 82 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 DEFB131AP59861 70 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
MSH6-214ENST00000616033 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
MSH6-214ENST00000616033 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
MSH6-214ENST00000616033 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
MSH6-214ENST00000616033 H3BT86 120 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 Q6Q795 121 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
MSH6-214ENST00000616033 IGHV4-61A0A0C4DH41 118 aa9.61□□□□□ -0.87
MSH6-214ENST00000616033 COX6A2Q02221 97 aa9.61□□□□□ -0.87
MSH6-214ENST00000616033 CFHR3Q02985 330 aa9.61□□□□□ -0.87
MSH6-214ENST00000616033 PRIMA1Q86XR5 153 aa9.61□□□□□ -0.87
MSH6-214ENST00000616033 USMG5Q96IX5 58 aa9.61□□□□□ -0.87
MSH6-214ENST00000616033 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
MSH6-214ENST00000616033 RBMY1A1P0DJD3 496 aaKnown RBP9.6□□□□□ -0.87
MSH6-214ENST00000616033 RBMY1CP0DJD4 496 aa9.6□□□□□ -0.87
MSH6-214ENST00000616033 RBMY1FQ15415 496 aaKnown RBP9.6□□□□□ -0.87
MSH6-214ENST00000616033 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
MSH6-214ENST00000616033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.6□□□□□ -0.87
MSH6-214ENST00000616033 NOTCH2Q04721 2471 aa9.59□□□□□ -0.87
MSH6-214ENST00000616033 IGHG2P01859 326 aa9.59□□□□□ -0.87
MSH6-214ENST00000616033 USP24Q9UPU5 2620 aa9.59□□□□□ -0.87
MSH6-214ENST00000616033 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
MSH6-214ENST00000616033 CITED2Q99967 270 aaPredicted RBP9.59□□□□□ -0.87
MSH6-214ENST00000616033 NIPBLQ6KC79 2804 aaeCLIP9.59□□□□□ -0.872e-6■■□□□ 12.2
MSH6-214ENST00000616033 UBE2E2Q96LR5 201 aa9.59□□□□□ -0.87
MSH6-214ENST00000616033 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
MSH6-214ENST00000616033 OXTP01178 125 aa9.58□□□□□ -0.88
MSH6-214ENST00000616033 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
MSH6-214ENST00000616033 WFDC9Q8NEX5 89 aa9.58□□□□□ -0.88
MSH6-214ENST00000616033 LINC00308Q8TCZ7 52 aa9.57□□□□□ -0.88
MSH6-214ENST00000616033 NF1P21359 2839 aa9.57□□□□□ -0.88
MSH6-214ENST00000616033 IGHV4-59P01825 116 aa9.57□□□□□ -0.88
MSH6-214ENST00000616033 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
MSH6-214ENST00000616033 DOPEY1Q5JWR5 2465 aa9.57□□□□□ -0.88
MSH6-214ENST00000616033 ATP5G1P05496 136 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 UBE2D4Q9Y2X8 147 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 RNASE1P07998 156 aaKnown RBP9.56□□□□□ -0.88
MSH6-214ENST00000616033 FBXL19-AS1Q494R0 122 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 LRRC75A-AS1Q8N1F1 130 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 PRORYQ9H606 182 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 MXRA5Q9NR99 2828 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 COX7CP15954 63 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
MSH6-214ENST00000616033 ANKRD17O75179 2603 aaKnown RBP9.55□□□□□ -0.88
MSH6-214ENST00000616033 SOSTDC1Q6X4U4 206 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 NBEAL2Q6ZNJ1 2754 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 C11orf44Q8N8P7 122 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 PEMTQ9UBM1 199 aa9.55□□□□□ -0.88
MSH6-214ENST00000616033 TIRAPP58753 221 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 AVPP01185 164 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 C14orf132Q9NPU4 83 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 J3QLI3 93 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 C19orf54Q5BKX5 351 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 C18orf65Q6ZTR6 163 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 DPH3Q96FX2 82 aa9.54□□□□□ -0.88
MSH6-214ENST00000616033 K7EQG2 157 aa9.53□□□□□ -0.88
MSH6-214ENST00000616033 SLPIP03973 132 aa9.53□□□□□ -0.88
MSH6-214ENST00000616033 SLURP1P55000 103 aa9.53□□□□□ -0.88
MSH6-214ENST00000616033 TRGV1A0A0A0MS02 117 aa9.53□□□□□ -0.88
MSH6-214ENST00000616033 COX7A2LO14548 114 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms