RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TMEM242Q9NWH2 141 aa14.21□□□□□ -0.13
MMP28-203ENST00000612672 TRAV1-1A0A0B4J248 108 aa14.2□□□□□ -0.14
MMP28-203ENST00000612672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.2□□□□□ -0.14
MMP28-203ENST00000612672 MEF2BQ02080 365 aaPredicted RBP14.2□□□□□ -0.14
MMP28-203ENST00000612672 KRTAP11-1Q8IUC1 163 aa14.2□□□□□ -0.14
MMP28-203ENST00000612672 ZNF664Q8N3J9 261 aa14.2□□□□□ -0.14
MMP28-203ENST00000612672 CDC42SE2Q9NRR3 84 aa14.2□□□□□ -0.14
MMP28-203ENST00000612672 I3L3M4 83 aa14.19□□□□□ -0.14
MMP28-203ENST00000612672 TMEM101Q96IK0 257 aa14.19□□□□□ -0.14
MMP28-203ENST00000612672 BTF3L4Q96K17 158 aa14.19□□□□□ -0.14
MMP28-203ENST00000612672 RPP21Q9H633 154 aaKnown RBP14.19□□□□□ -0.14
MMP28-203ENST00000612672 PMCHP20382 165 aa14.18□□□□□ -0.14
MMP28-203ENST00000612672 SS18Q15532 418 aa14.18□□□□□ -0.14
MMP28-203ENST00000612672 MED9Q9NWA0 146 aa14.18□□□□□ -0.14
MMP28-203ENST00000612672 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
MMP28-203ENST00000612672 KANTRA0A1W2PQU2 76 aa14.16□□□□□ -0.14
MMP28-203ENST00000612672 MRPL52Q86TS9 123 aaKnown RBP14.16□□□□□ -0.14
MMP28-203ENST00000612672 HMSDA8MTL9 139 aa14.15□□□□□ -0.14
MMP28-203ENST00000612672 PDE6DO43924 150 aa14.15□□□□□ -0.14
MMP28-203ENST00000612672 APOMO95445 188 aa14.15□□□□□ -0.14
MMP28-203ENST00000612672 MRAP2Q96G30 205 aa14.15□□□□□ -0.14
MMP28-203ENST00000612672 OPRPNQ99935 248 aaPredicted RBP14.15□□□□□ -0.14
MMP28-203ENST00000612672 IGLV7-43P04211 117 aa14.14□□□□□ -0.15
MMP28-203ENST00000612672 RPL18AQ02543 176 aaKnown RBP14.14□□□□□ -0.15
MMP28-203ENST00000612672 RNASE13Q5GAN3 156 aaKnown RBP14.14□□□□□ -0.15
MMP28-203ENST00000612672 CAMK2N2Q96S95 79 aa14.14□□□□□ -0.15
MMP28-203ENST00000612672 KRTAP1-4P0C5Y4 121 aa14.13□□□□□ -0.15
MMP28-203ENST00000612672 EIF5AP63241 154 aaKnown RBP14.13□□□□□ -0.15
MMP28-203ENST00000612672 EIF5AL1Q6IS14 154 aaKnown RBP14.13□□□□□ -0.15
MMP28-203ENST00000612672 OCC1Q8TAD7 63 aa14.13□□□□□ -0.15
MMP28-203ENST00000612672 ISOC2Q96AB3 205 aa14.13□□□□□ -0.15
MMP28-203ENST00000612672 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
MMP28-203ENST00000612672 FAM168BA1KXE4 195 aa14.11□□□□□ -0.15
MMP28-203ENST00000612672 COX7A2LO14548 114 aa14.11□□□□□ -0.15
MMP28-203ENST00000612672 POLR2KP53803 58 aaKnown RBP14.11□□□□□ -0.15
MMP28-203ENST00000612672 TEX261Q6UWH6 196 aa14.11□□□□□ -0.15
MMP28-203ENST00000612672 H0Y9J4 135 aa14.1□□□□□ -0.15
MMP28-203ENST00000612672 DIRC1Q969H9 104 aa14.1□□□□□ -0.15
MMP28-203ENST00000612672 ST20Q9HBF5 79 aa14.1□□□□□ -0.15
MMP28-203ENST00000612672 MALP21145 153 aa14.09□□□□□ -0.15
MMP28-203ENST00000612672 SMIM15Q7Z3B0 74 aa14.09□□□□□ -0.15
MMP28-203ENST00000612672 C5orf38Q86SI9 138 aa14.09□□□□□ -0.15
MMP28-203ENST00000612672 C2orf48Q96LS8 159 aa14.09□□□□□ -0.15
MMP28-203ENST00000612672 C7orf77A4D0Y5 90 aa14.08□□□□□ -0.16
MMP28-203ENST00000612672 TRBV27A0A0K0K1C4 114 aa14.06□□□□□ -0.16
MMP28-203ENST00000612672 PRR4Q16378 134 aa14.06□□□□□ -0.16
MMP28-203ENST00000612672 KRTAP7-1Q8IUC3 87 aa14.06□□□□□ -0.16
MMP28-203ENST00000612672 C1orf196B1AJZ1 125 aa14.05□□□□□ -0.16
MMP28-203ENST00000612672 SPAG11BQ08648 103 aa14.05□□□□□ -0.16
MMP28-203ENST00000612672 Q6ZUT4 128 aa14.05□□□□□ -0.16
MMP28-203ENST00000612672 UBE2D4Q9Y2X8 147 aa14.05□□□□□ -0.16
MMP28-203ENST00000612672 MUC17Q685J3 4493 aa14.05□□□□□ -0.16
MMP28-203ENST00000612672 A0A087WZ39 114 aa14.04□□□□□ -0.16
MMP28-203ENST00000612672 TRAV13-1A0A0B4J241 112 aa14.04□□□□□ -0.16
MMP28-203ENST00000612672 SMKR1H3BMG3 65 aa14.04□□□□□ -0.16
MMP28-203ENST00000612672 LCE2AQ5TA79 106 aaPredicted RBP14.04□□□□□ -0.16
MMP28-203ENST00000612672 hCG_2014768A0A024R1R8 64 aa14.03□□□□□ -0.16
MMP28-203ENST00000612672 IGLV1-50A0A075B6I6 118 aa14.03□□□□□ -0.16
MMP28-203ENST00000612672 GATCO43716 136 aaKnown RBP14.03□□□□□ -0.16
MMP28-203ENST00000612672 C10orf25Q5T742 122 aa14.03□□□□□ -0.16
MMP28-203ENST00000612672 TCTE3Q8IZS6 198 aa14.03□□□□□ -0.16
MMP28-203ENST00000612672 TEX46H3BTG2 121 aa14.01□□□□□ -0.17
MMP28-203ENST00000612672 RAB4AP20338 218 aa14.01□□□□□ -0.17
MMP28-203ENST00000612672 RNF151Q2KHN1 245 aa14.01□□□□□ -0.17
MMP28-203ENST00000612672 FAM19A5Q7Z5A7 132 aaPredicted RBP14□□□□□ -0.17
MMP28-203ENST00000612672 AMN1Q8IY45 258 aa14□□□□□ -0.17
MMP28-203ENST00000612672 FAM104AQ969W3 186 aa14□□□□□ -0.17
MMP28-203ENST00000612672 CSDC2Q9Y534 153 aaKnown RBP14□□□□□ -0.17
MMP28-203ENST00000612672 FAM231DQ6ZW35 169 aa13.99□□□□□ -0.17
MMP28-203ENST00000612672 TMEM191AQ9H0A3 160 aa13.99□□□□□ -0.17
MMP28-203ENST00000612672 A8MWL6 223 aa13.98□□□□□ -0.17
MMP28-203ENST00000612672 NRACQ8N912 160 aa13.98□□□□□ -0.17
MMP28-203ENST00000612672 FAM210AQ96ND0 272 aa13.98□□□□□ -0.17
MMP28-203ENST00000612672 MRPL35Q9NZE8 188 aaKnown RBP13.98□□□□□ -0.17
MMP28-203ENST00000612672 OR10D4PQ8NGN7 298 aa13.96□□□□□ -0.17
MMP28-203ENST00000612672 ORAOV1Q8WV07 137 aa13.96□□□□□ -0.17
MMP28-203ENST00000612672 C6orf48Q9UBA6 75 aa13.96□□□□□ -0.17
MMP28-203ENST00000612672 FCER1GP30273 86 aa13.95□□□□□ -0.18
MMP28-203ENST00000612672 UNQ6190/PRO20217Q6UXQ8 127 aa13.95□□□□□ -0.18
MMP28-203ENST00000612672 KRTAP9-6A0A140TA67 174 aa13.94□□□□□ -0.18
MMP28-203ENST00000612672 A0A1B0GUT8 65 aa13.94□□□□□ -0.18
MMP28-203ENST00000612672 HIGD1CA8MV81 97 aa13.94□□□□□ -0.18
MMP28-203ENST00000612672 TLX1NBP0CAT3 122 aa13.94□□□□□ -0.18
MMP28-203ENST00000612672 CT83Q5H943 113 aa13.94□□□□□ -0.18
MMP28-203ENST00000612672 A0A1B0GVG6 124 aa13.93□□□□□ -0.18
MMP28-203ENST00000612672 VCYO14598 125 aa13.93□□□□□ -0.18
MMP28-203ENST00000612672 GAGE2EQ4V326 116 aa13.93□□□□□ -0.18
MMP28-203ENST00000612672 AKAP14Q86UN6 197 aa13.93□□□□□ -0.18
MMP28-203ENST00000612672 GAGE2DQ9UEU5 116 aa13.93□□□□□ -0.18
MMP28-203ENST00000612672 IGHV3OR16-9A0A0B4J2B5 98 aa13.92□□□□□ -0.18
MMP28-203ENST00000612672 A0A0U1RQV1 116 aa13.92□□□□□ -0.18
MMP28-203ENST00000612672 UBE2D1P51668 147 aa13.92□□□□□ -0.18
MMP28-203ENST00000612672 M0QXV9 152 aa13.91□□□□□ -0.18
MMP28-203ENST00000612672 SUMO2P61956 95 aaKnown RBP13.91□□□□□ -0.18
MMP28-203ENST00000612672 RPL39P62891 51 aaKnown RBP13.91□□□□□ -0.18
MMP28-203ENST00000612672 TSKUQ8WUA8 353 aa13.91□□□□□ -0.18
MMP28-203ENST00000612672 IMMP2LQ96T52 175 aa13.91□□□□□ -0.18
MMP28-203ENST00000612672 SMDT1Q9H4I9 107 aa13.91□□□□□ -0.18
MMP28-203ENST00000612672 NDUFA1O15239 70 aa13.9□□□□□ -0.18
MMP28-203ENST00000612672 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms