RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 GAGE12HA6NDE8 117 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 A6NJY4 79 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 GAGE4Q13068 117 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 GAGE5Q13069 117 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
PCDHGA3-202ENST00000612467 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 COX6A2Q02221 97 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 A0A0J9YXY3 114 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 ADAMTSL4-AS1Q5T5F5 129 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 DAND5Q8N907 189 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 SPATA3Q8NHX4 192 aa10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 ZNF418Q8TF45 676 aaPredicted RBP10.08□□□□□ -0.8
PCDHGA3-202ENST00000612467 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 GAGE7O76087 117 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 RNASE1P07998 156 aaKnown RBP10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 PTH2Q96A98 100 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 CDKN2A-AS1Q9UH64 79 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 SMCPP49901 116 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 IL17DQ8TAD2 202 aa10.07□□□□□ -0.8
PCDHGA3-202ENST00000612467 TRAV25A0A0B4J276 109 aa10.06□□□□□ -0.8
PCDHGA3-202ENST00000612467 J3QKU1 62 aa10.06□□□□□ -0.8
PCDHGA3-202ENST00000612467 TRRAPQ9Y4A5 3859 aa10.06□□□□□ -0.8
PCDHGA3-202ENST00000612467 C19orf73Q9NVV2 129 aa10.06□□□□□ -0.8
PCDHGA3-202ENST00000612467 PRSS2P07478 247 aa10.06□□□□□ -0.8
PCDHGA3-202ENST00000612467 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 TCL1BO95988 128 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 DGAT2L7PQ6IED9 249 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 CKS1BP61024 79 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 LITAFQ99732 161 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
PCDHGA3-202ENST00000612467 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 GEMIN7Q9H840 131 aaKnown RBP10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 IGHV1-58A0A0C4DH39 117 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 A0A1B0GV72 72 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 F8W1H4 67 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 IGLV1-51P01701 117 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 CRYBA4P53673 196 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 SPANXA1Q9NS26 97 aa10.04□□□□□ -0.8
PCDHGA3-202ENST00000612467 K7EQD1 137 aa10.03□□□□□ -0.8
PCDHGA3-202ENST00000612467 UBE2D3P61077 147 aa10.03□□□□□ -0.8
PCDHGA3-202ENST00000612467 UBE2D2P62837 147 aa10.03□□□□□ -0.8
PCDHGA3-202ENST00000612467 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
PCDHGA3-202ENST00000612467 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
PCDHGA3-202ENST00000612467 ATRQ13535 2644 aa10.03□□□□□ -0.8
PCDHGA3-202ENST00000612467 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
PCDHGA3-202ENST00000612467 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
PCDHGA3-202ENST00000612467 DNAJC30Q96LL9 226 aa10.02□□□□□ -0.81
PCDHGA3-202ENST00000612467 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
PCDHGA3-202ENST00000612467 NSD1Q96L73 2696 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA3-202ENST00000612467 SCGB1C2P0DMR2 95 aa10.02□□□□□ -0.81
PCDHGA3-202ENST00000612467 HILS1P60008 231 aa10.01□□□□□ -0.81
PCDHGA3-202ENST00000612467 TEX29Q8N6K0 151 aa10.01□□□□□ -0.81
PCDHGA3-202ENST00000612467 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
PCDHGA3-202ENST00000612467 SCGB1A1P11684 91 aa10□□□□□ -0.81
PCDHGA3-202ENST00000612467 RPL36AP83881 106 aaKnown RBP10□□□□□ -0.81
PCDHGA3-202ENST00000612467 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
PCDHGA3-202ENST00000612467 RPL36ALQ969Q0 106 aaKnown RBP10□□□□□ -0.81
PCDHGA3-202ENST00000612467 TMEM101Q96IK0 257 aa10□□□□□ -0.81
PCDHGA3-202ENST00000612467 IGHV3-33P01772 117 aa10□□□□□ -0.81
PCDHGA3-202ENST00000612467 CSNK1G2-AS1Q8NCQ2 148 aa10□□□□□ -0.81
PCDHGA3-202ENST00000612467 TRAV4A0A0B4J268 109 aa9.99□□□□□ -0.81
PCDHGA3-202ENST00000612467 SPATA25Q9BR10 227 aa9.99□□□□□ -0.81
PCDHGA3-202ENST00000612467 Q1RN00 199 aa9.99□□□□□ -0.81
PCDHGA3-202ENST00000612467 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
PCDHGA3-202ENST00000612467 LY6G6DO95868 133 aa9.98□□□□□ -0.81
PCDHGA3-202ENST00000612467 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
PCDHGA3-202ENST00000612467 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
PCDHGA3-202ENST00000612467 LINC00482Q8N8I6 264 aa9.97□□□□□ -0.81
PCDHGA3-202ENST00000612467 ERG28Q9UKR5 140 aa9.97□□□□□ -0.81
PCDHGA3-202ENST00000612467 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.81
PCDHGA3-202ENST00000612467 PF4P02776 101 aa9.96□□□□□ -0.81
PCDHGA3-202ENST00000612467 GAGE6Q13070 117 aa9.96□□□□□ -0.81
PCDHGA3-202ENST00000612467 Q9H8V8 135 aa9.96□□□□□ -0.81
PCDHGA3-202ENST00000612467 DAZ2Q13117 558 aaKnown RBP9.96□□□□□ -0.82
PCDHGA3-202ENST00000612467 ZFAND6Q6FIF0 208 aa9.96□□□□□ -0.82
PCDHGA3-202ENST00000612467 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
PCDHGA3-202ENST00000612467 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
PCDHGA3-202ENST00000612467 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
PCDHGA3-202ENST00000612467 DEFB4AO15263 64 aa9.95□□□□□ -0.82
PCDHGA3-202ENST00000612467 CRLF1O75462 422 aa9.95□□□□□ -0.82
PCDHGA3-202ENST00000612467 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
PCDHGA3-202ENST00000612467 MT-ATP8P03928 68 aa9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 A0A096LPF7 62 aa9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
PCDHGA3-202ENST00000612467 TRIAP1O43715 76 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms