RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 LITAFQ99732 161 aa12.93□□□□□ -0.34
TNIP1-221ENST00000610874 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
TNIP1-221ENST00000610874 ANAPC13Q9BS18 74 aa12.93□□□□□ -0.34
TNIP1-221ENST00000610874 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
TNIP1-221ENST00000610874 TEX49A0A1B0GTD5 131 aa12.92□□□□□ -0.34
TNIP1-221ENST00000610874 MRPS36P82909 103 aaKnown RBP12.92□□□□□ -0.34
TNIP1-221ENST00000610874 NDUFA12Q9UI09 145 aa12.92□□□□□ -0.34
TNIP1-221ENST00000610874 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
TNIP1-221ENST00000610874 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
TNIP1-221ENST00000610874 M0QXV9 152 aa12.91□□□□□ -0.34
TNIP1-221ENST00000610874 NACAE9PAV3 2078 aa12.91□□□□□ -0.34
TNIP1-221ENST00000610874 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.9□□□□□ -0.34
TNIP1-221ENST00000610874 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.34
TNIP1-221ENST00000610874 IGKV2-29A2NJV5 120 aaPredicted RBP12.9□□□□□ -0.34
TNIP1-221ENST00000610874 TMEM86BQ8N661 226 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 TRBV10-2A0A0K0K1G8 114 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 SNCGO76070 127 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 Q6ZSN1 163 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 TMEM61Q8N0U2 210 aa12.89□□□□□ -0.35
TNIP1-221ENST00000610874 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
TNIP1-221ENST00000610874 CRLF1O75462 422 aa12.88□□□□□ -0.35
TNIP1-221ENST00000610874 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
TNIP1-221ENST00000610874 DEFB131AP59861 70 aa12.88□□□□□ -0.35
TNIP1-221ENST00000610874 CITED1Q99966 193 aa12.88□□□□□ -0.35
TNIP1-221ENST00000610874 TRAV4A0A0B4J268 109 aa12.88□□□□□ -0.35
TNIP1-221ENST00000610874 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
TNIP1-221ENST00000610874 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
TNIP1-221ENST00000610874 DAND5Q8N907 189 aa12.87□□□□□ -0.35
TNIP1-221ENST00000610874 FLNBO75369 2602 aaKnown RBP12.87□□□□□ -0.35
TNIP1-221ENST00000610874 MIAQ16674 131 aa12.87□□□□□ -0.35
TNIP1-221ENST00000610874 CLEC2BQ92478 149 aa12.87□□□□□ -0.35
TNIP1-221ENST00000610874 CITED2Q99967 270 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-221ENST00000610874 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 H3BMM0 161 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 UBE2WQ96B02 151 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 UBE2D4Q9Y2X8 147 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 SPANXDQ9BXN6 97 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
TNIP1-221ENST00000610874 TINCRA0A1B0GVN0 87 aa12.85□□□□□ -0.35
TNIP1-221ENST00000610874 LINC01006Q8NI28 216 aa12.85□□□□□ -0.35
TNIP1-221ENST00000610874 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
TNIP1-221ENST00000610874 HIVEP1P15822 2718 aa12.84□□□□□ -0.35
TNIP1-221ENST00000610874 H7C423 109 aa12.84□□□□□ -0.35
TNIP1-221ENST00000610874 COX6CP09669 75 aa12.84□□□□□ -0.35
TNIP1-221ENST00000610874 DYNLRB2Q8TF09 96 aa12.84□□□□□ -0.35
TNIP1-221ENST00000610874 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
TNIP1-221ENST00000610874 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
TNIP1-221ENST00000610874 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
TNIP1-221ENST00000610874 EDA2RQ9HAV5 297 aa12.84□□□□□ -0.35
TNIP1-221ENST00000610874 RPL13AP40429 203 aaKnown RBP12.83□□□□□ -0.36
TNIP1-221ENST00000610874 PEMTQ9UBM1 199 aa12.83□□□□□ -0.36
TNIP1-221ENST00000610874 SPANXA1Q9NS26 97 aa12.83□□□□□ -0.36
TNIP1-221ENST00000610874 NSD1Q96L73 2696 aaPredicted RBP12.82□□□□□ -0.36
TNIP1-221ENST00000610874 CDKN2A-AS1Q9UH64 79 aa12.82□□□□□ -0.36
TNIP1-221ENST00000610874 C2CD3Q4AC94 2353 aa12.82□□□□□ -0.36
TNIP1-221ENST00000610874 ZNF415Q09FC8 603 aa12.81□□□□□ -0.36
TNIP1-221ENST00000610874 CCL24O00175 119 aa12.81□□□□□ -0.36
TNIP1-221ENST00000610874 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
TNIP1-221ENST00000610874 LY6G6DO95868 133 aa12.8□□□□□ -0.36
TNIP1-221ENST00000610874 NHLRC4P0CG21 123 aaPredicted RBP12.8□□□□□ -0.36
TNIP1-221ENST00000610874 DEFB114Q30KQ6 69 aa12.8□□□□□ -0.36
TNIP1-221ENST00000610874 RNASE1P07998 156 aaKnown RBP12.8□□□□□ -0.36
TNIP1-221ENST00000610874 A0A0U1RRA0 63 aa12.79□□□□□ -0.36
TNIP1-221ENST00000610874 NDUFV3P56181 108 aaKnown RBP12.79□□□□□ -0.36
TNIP1-221ENST00000610874 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
TNIP1-221ENST00000610874 LINC01587Q99440 93 aa12.79□□□□□ -0.36
TNIP1-221ENST00000610874 SS18L2Q9UHA2 77 aa12.79□□□□□ -0.36
TNIP1-221ENST00000610874 VWFP04275 2813 aa12.79□□□□□ -0.36
TNIP1-221ENST00000610874 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
TNIP1-221ENST00000610874 DGAT2L7PQ6IED9 249 aa12.78□□□□□ -0.36
TNIP1-221ENST00000610874 LINC01600Q96MT4 127 aa12.78□□□□□ -0.36
TNIP1-221ENST00000610874 B5MCH6 92 aa12.78□□□□□ -0.36
TNIP1-221ENST00000610874 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.78□□□□□ -0.36
TNIP1-221ENST00000610874 H3BT86 120 aa12.77□□□□□ -0.36
TNIP1-221ENST00000610874 LST1O00453 97 aa12.77□□□□□ -0.36
TNIP1-221ENST00000610874 GAGE5Q13069 117 aa12.77□□□□□ -0.36
TNIP1-221ENST00000610874 GAGE6Q13070 117 aa12.77□□□□□ -0.36
TNIP1-221ENST00000610874 TMEM101Q96IK0 257 aa12.77□□□□□ -0.36
TNIP1-221ENST00000610874 TENM1Q9UKZ4 2725 aa12.77□□□□□ -0.37
TNIP1-221ENST00000610874 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
TNIP1-221ENST00000610874 IFITM1P13164 125 aa12.76□□□□□ -0.37
TNIP1-221ENST00000610874 HILS1P60008 231 aa12.76□□□□□ -0.37
TNIP1-221ENST00000610874 COX6A2Q02221 97 aa12.76□□□□□ -0.37
TNIP1-221ENST00000610874 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
TNIP1-221ENST00000610874 INAFM1C9JVW0 142 aa12.75□□□□□ -0.37
TNIP1-221ENST00000610874 NDUFA1O15239 70 aa12.75□□□□□ -0.37
TNIP1-221ENST00000610874 C11orf72Q8NBR9 251 aa12.75□□□□□ -0.37
TNIP1-221ENST00000610874 Q9H8V8 135 aa12.75□□□□□ -0.37
TNIP1-221ENST00000610874 TIMM17BO60830 172 aa12.74□□□□□ -0.37
TNIP1-221ENST00000610874 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
TNIP1-221ENST00000610874 NDUFA7O95182 113 aa12.73□□□□□ -0.37
TNIP1-221ENST00000610874 IGHV3OR16-12A0A075B7B8 117 aa12.73□□□□□ -0.37
TNIP1-221ENST00000610874 A8MTW9 85 aa12.72□□□□□ -0.37
TNIP1-221ENST00000610874 CCDC179H3BU77 68 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms