RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 H7C423 109 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 PPP1R17O96001 155 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 ZNF25P17030 456 aaPredicted RBP3.83□□□□□ -1.8
FOCAD-213ENST00000604254 RAB4AP20338 218 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 RPS10P46783 165 aaKnown RBP3.83□□□□□ -1.8
FOCAD-213ENST00000604254 CAMPP49913 170 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 BTF3L4Q96K17 158 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
FOCAD-213ENST00000604254 TRBV27A0A0K0K1C4 114 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 hDV102S1A0JD36 115 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 F8W036 122 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 PPP1R2P9O14990 202 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 GAS8-AS1O95177 125 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 TSHBP01222 138 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 SMR3BP02814 79 aaPredicted RBP3.82□□□□□ -1.8
FOCAD-213ENST00000604254 S100A8P05109 93 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 FGF6P10767 208 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 FCER1GP30273 86 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 PTTG1IPP53801 180 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 HBBP68871 147 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 MRPL54Q6P161 138 aaKnown RBP3.82□□□□□ -1.8
FOCAD-213ENST00000604254 KRTAP26-1Q6PEX3 210 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 Q6ZSA8 131 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 FAM30AQ9NZY2 134 aa3.82□□□□□ -1.8
FOCAD-213ENST00000604254 GAGE12HA6NDE8 117 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 VCYO14598 125 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 ATP6V1G1O75348 118 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 PRSS1P07477 247 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 CKS2P33552 79 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
FOCAD-213ENST00000604254 PNRC1Q12796 327 aaPredicted RBP3.81□□□□□ -1.8
FOCAD-213ENST00000604254 MRPL51Q4U2R6 128 aaKnown RBP3.81□□□□□ -1.8
FOCAD-213ENST00000604254 FAM104BQ5XKR9 115 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 NRACQ8N912 160 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 FAT1Q14517 4588 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 MYCBP2O75592 4640 aa3.81□□□□□ -1.8
FOCAD-213ENST00000604254 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.8□□□□□ -1.8
FOCAD-213ENST00000604254 A0A1B0GXF2 115 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 LINC00862A6NCI5 91 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 D6R8Y8 96 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 MT-ND4LP03901 98 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 ESDP10768 282 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 POLR2KP53803 58 aaKnown RBP3.8□□□□□ -1.8
FOCAD-213ENST00000604254 SMAGPQ0VAQ4 97 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 CLLU1Q5K131 121 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 DGAT2L7PQ6IED9 249 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 CFAP161Q6P656 301 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 ATP5L2Q7Z4Y8 100 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 CHCHD10Q8WYQ3 142 aaPredicted RBP3.8□□□□□ -1.8
FOCAD-213ENST00000604254 CHAC1Q9BUX1 264 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 DNAH8Q96JB1 4490 aa3.8□□□□□ -1.8
FOCAD-213ENST00000604254 SRRM2Q9UQ35 2752 aaKnown RBP3.79□□□□□ -1.8
FOCAD-213ENST00000604254 FLG2Q5D862 2391 aaPredicted RBP3.79□□□□□ -1.8
FOCAD-213ENST00000604254 IGHV3-64A0A075B6Q5 118 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 TCAPO15273 167 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 CCL25O15444 150 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 TNFRSF6BO95407 300 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 PPBPP02775 128 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 XCL1P47992 114 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 CNBPP62633 177 aaKnown RBP3.79□□□□□ -1.8
FOCAD-213ENST00000604254 SS18Q15532 418 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 MRPL52Q86TS9 123 aaKnown RBP3.79□□□□□ -1.8
FOCAD-213ENST00000604254 C15orf56Q8N910 161 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 C20orf78Q9BR46 151 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 SMIM2Q9BVW6 85 aa3.79□□□□□ -1.8
FOCAD-213ENST00000604254 TRBV24-1A0A075B6N3 115 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 LINC00959A0A1B0GUT2 108 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 NPYP01303 97 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 RPL32P62910 135 aaKnown RBP3.78□□□□□ -1.8
FOCAD-213ENST00000604254 FOXI1Q12951 378 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 UQCC3Q6UW78 93 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 Q6ZUT4 128 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 ORMDL3Q8N138 153 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 ZNF664Q8N3J9 261 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 C9orf163Q8N9P6 203 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 CIRBP-AS1Q8TBR5 109 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 CDC42SE2Q9NRR3 84 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 UBE2D4Q9Y2X8 147 aa3.78□□□□□ -1.8
FOCAD-213ENST00000604254 GVQW2A0A096LPI5 108 aaPredicted RBP3.77□□□□□ -1.81
FOCAD-213ENST00000604254 IGHV1-58A0A0C4DH39 117 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 PHOX2AO14813 284 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 RAB5AP20339 215 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 MALP21145 153 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 IFITM2Q01629 132 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 RNASE13Q5GAN3 156 aaKnown RBP3.77□□□□□ -1.81
FOCAD-213ENST00000604254 TMEM136Q6ZRR5 245 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 PRELID3AQ96N28 172 aa3.77□□□□□ -1.81
FOCAD-213ENST00000604254 CSDC2Q9Y534 153 aaKnown RBP3.77□□□□□ -1.81
FOCAD-213ENST00000604254 TRAV13-1A0A0B4J241 112 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms