RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 LAMTOR2Q9Y2Q5 125 aa12.43□□□□□ -0.42
FARP1-229ENST00000600190 GAS8-AS1O95177 125 aa12.42□□□□□ -0.42
FARP1-229ENST00000600190 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
FARP1-229ENST00000600190 MPV17L2Q567V2 206 aa12.42□□□□□ -0.42
FARP1-229ENST00000600190 NRACQ8N912 160 aa12.42□□□□□ -0.42
FARP1-229ENST00000600190 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
FARP1-229ENST00000600190 TMEM18Q96B42 140 aa12.42□□□□□ -0.42
FARP1-229ENST00000600190 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
FARP1-229ENST00000600190 HLA-DQA1P01909 254 aa12.41□□□□□ -0.42
FARP1-229ENST00000600190 RNASEKQ6P5S7 137 aaKnown RBP12.41□□□□□ -0.42
FARP1-229ENST00000600190 SLC7A5P1Q8MH63 180 aa12.41□□□□□ -0.42
FARP1-229ENST00000600190 TMEM101Q96IK0 257 aa12.41□□□□□ -0.42
FARP1-229ENST00000600190 RAB5AP20339 215 aa12.4□□□□□ -0.42
FARP1-229ENST00000600190 RBX1P62877 108 aa12.4□□□□□ -0.42
FARP1-229ENST00000600190 GNB1LQ9BYB4 327 aa12.4□□□□□ -0.42
FARP1-229ENST00000600190 KRTAP29-1A8MX34 341 aaPredicted RBP12.39□□□□□ -0.43
FARP1-229ENST00000600190 RPL32P62910 135 aaKnown RBP12.39□□□□□ -0.43
FARP1-229ENST00000600190 DGAT2L7PQ6IED9 249 aa12.39□□□□□ -0.43
FARP1-229ENST00000600190 Q8N976 141 aa12.39□□□□□ -0.43
FARP1-229ENST00000600190 MAP1LC3AQ9H492 121 aa12.39□□□□□ -0.43
FARP1-229ENST00000600190 IGKV2D-24A0A075B6R9 120 aa12.38□□□□□ -0.43
FARP1-229ENST00000600190 MT-ND6P03923 174 aa12.38□□□□□ -0.43
FARP1-229ENST00000600190 C1orf43Q9BWL3 253 aa12.38□□□□□ -0.43
FARP1-229ENST00000600190 TSHBP01222 138 aa12.37□□□□□ -0.43
FARP1-229ENST00000600190 NPYP01303 97 aa12.37□□□□□ -0.43
FARP1-229ENST00000600190 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
FARP1-229ENST00000600190 MIAQ16674 131 aa12.37□□□□□ -0.43
FARP1-229ENST00000600190 SCXQ7RTU7 201 aa12.37□□□□□ -0.43
FARP1-229ENST00000600190 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
FARP1-229ENST00000600190 LRP1Q07954 4544 aaKnown RBP12.37□□□□□ -0.43
FARP1-229ENST00000600190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
FARP1-229ENST00000600190 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
FARP1-229ENST00000600190 LINC00269Q8N2A0 174 aa12.36□□□□□ -0.43
FARP1-229ENST00000600190 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
FARP1-229ENST00000600190 FGF6P10767 208 aa12.35□□□□□ -0.43
FARP1-229ENST00000600190 REG3AQ06141 175 aa12.35□□□□□ -0.43
FARP1-229ENST00000600190 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
FARP1-229ENST00000600190 ESDP10768 282 aa12.34□□□□□ -0.43
FARP1-229ENST00000600190 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
FARP1-229ENST00000600190 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
FARP1-229ENST00000600190 ENHOQ6UWT2 76 aa12.33□□□□□ -0.44
FARP1-229ENST00000600190 OR5A1Q8NGJ0 315 aa12.33□□□□□ -0.44
FARP1-229ENST00000600190 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
FARP1-229ENST00000600190 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 G0S2P27469 103 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 KIAA1644Q3SXP7 199 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 CLPSL2Q6UWE3 100 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 MRPL18Q9H0U6 180 aaKnown RBP12.32□□□□□ -0.44
FARP1-229ENST00000600190 NXT2Q9NPJ8 142 aaKnown RBP12.32□□□□□ -0.44
FARP1-229ENST00000600190 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 FAT3Q8TDW7 4589 aa12.32□□□□□ -0.44
FARP1-229ENST00000600190 TGIF2-C20orf24A0A0A6YYL0 155 aa12.31□□□□□ -0.44
FARP1-229ENST00000600190 Q8N8P6 123 aa12.31□□□□□ -0.44
FARP1-229ENST00000600190 PRR34Q9NV39 138 aa12.31□□□□□ -0.44
FARP1-229ENST00000600190 HMCN2Q8NDA2 5059 aa12.3□□□□□ -0.44
FARP1-229ENST00000600190 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
FARP1-229ENST00000600190 K7EMI3 77 aa12.3□□□□□ -0.44
FARP1-229ENST00000600190 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
FARP1-229ENST00000600190 CIRBP-AS1Q8TBR5 109 aa12.3□□□□□ -0.44
FARP1-229ENST00000600190 ORMDL2Q53FV1 153 aa12.29□□□□□ -0.44
FARP1-229ENST00000600190 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
FARP1-229ENST00000600190 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
FARP1-229ENST00000600190 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
FARP1-229ENST00000600190 KRTAP10-4P60372 401 aaPredicted RBP12.27□□□□□ -0.45
FARP1-229ENST00000600190 C14orf177Q52M58 125 aa12.27□□□□□ -0.45
FARP1-229ENST00000600190 ZNF664Q8N3J9 261 aa12.27□□□□□ -0.45
FARP1-229ENST00000600190 UBR4Q5T4S7 5183 aa12.27□□□□□ -0.45
FARP1-229ENST00000600190 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
FARP1-229ENST00000600190 SS18Q15532 418 aa12.26□□□□□ -0.45
FARP1-229ENST00000600190 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
FARP1-229ENST00000600190 IFI27P40305 119 aaPredicted RBP12.25□□□□□ -0.45
FARP1-229ENST00000600190 ALKBH7Q9BT30 221 aaPredicted RBP12.25□□□□□ -0.45
FARP1-229ENST00000600190 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
FARP1-229ENST00000600190 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
FARP1-229ENST00000600190 PKHD1L1Q86WI1 4243 aa12.25□□□□□ -0.45
FARP1-229ENST00000600190 CCL25O15444 150 aa12.24□□□□□ -0.45
FARP1-229ENST00000600190 OXTP01178 125 aa12.24□□□□□ -0.45
FARP1-229ENST00000600190 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
FARP1-229ENST00000600190 CYSLTR1Q9Y271 337 aa12.24□□□□□ -0.45
FARP1-229ENST00000600190 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
FARP1-229ENST00000600190 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
FARP1-229ENST00000600190 FA2HQ7L5A8 372 aa12.22□□□□□ -0.45
FARP1-229ENST00000600190 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
FARP1-229ENST00000600190 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
FARP1-229ENST00000600190 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
FARP1-229ENST00000600190 C1orf196B1AJZ1 125 aa12.2□□□□□ -0.46
FARP1-229ENST00000600190 RAB5BP61020 215 aa12.2□□□□□ -0.46
FARP1-229ENST00000600190 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
FARP1-229ENST00000600190 Q6ZN92 141 aa12.2□□□□□ -0.46
FARP1-229ENST00000600190 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
FARP1-229ENST00000600190 GAGE12HA6NDE8 117 aa12.19□□□□□ -0.46
FARP1-229ENST00000600190 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
FARP1-229ENST00000600190 PAPPA-AS1Q5QFB9 102 aa12.19□□□□□ -0.46
FARP1-229ENST00000600190 PYGO1Q9Y3Y4 419 aa12.19□□□□□ -0.46
FARP1-229ENST00000600190 USP17L23D6RBM5 183 aa12.18□□□□□ -0.46
FARP1-229ENST00000600190 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
FARP1-229ENST00000600190 PLA2G2DQ9UNK4 145 aa12.17□□□□□ -0.46
FARP1-229ENST00000600190 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms