RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 OR5A1Q8NGJ0 315 aa7.77□□□□□ -1.17
LIG1-217ENST00000599165 CAMPP49913 170 aa7.76□□□□□ -1.17
LIG1-217ENST00000599165 SUMO2P61956 95 aaKnown RBP7.76□□□□□ -1.17
LIG1-217ENST00000599165 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
LIG1-217ENST00000599165 CDC42SE2Q9NRR3 84 aa7.76□□□□□ -1.17
LIG1-217ENST00000599165 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
LIG1-217ENST00000599165 C7orf77A4D0Y5 90 aa7.75□□□□□ -1.17
LIG1-217ENST00000599165 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
LIG1-217ENST00000599165 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
LIG1-217ENST00000599165 TRBV24-1A0A075B6N3 115 aa7.74□□□□□ -1.17
LIG1-217ENST00000599165 GVQW2A0A096LPI5 108 aaPredicted RBP7.74□□□□□ -1.17
LIG1-217ENST00000599165 VCYO14598 125 aa7.74□□□□□ -1.17
LIG1-217ENST00000599165 CHTF8P0CG12 524 aa7.74□□□□□ -1.17
LIG1-217ENST00000599165 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
LIG1-217ENST00000599165 UBE2D4Q9Y2X8 147 aa7.74□□□□□ -1.17
LIG1-217ENST00000599165 A0A1B0GW15 77 aa7.73□□□□□ -1.17
LIG1-217ENST00000599165 CCL25O15444 150 aa7.73□□□□□ -1.17
LIG1-217ENST00000599165 NPYP01303 97 aa7.73□□□□□ -1.17
LIG1-217ENST00000599165 XCL1P47992 114 aa7.73□□□□□ -1.17
LIG1-217ENST00000599165 HNRNPA3P51991 378 aaKnown RBP7.73□□□□□ -1.17
LIG1-217ENST00000599165 RPL32P62910 135 aaKnown RBP7.73□□□□□ -1.17
LIG1-217ENST00000599165 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
LIG1-217ENST00000599165 LINC00862A6NCI5 91 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 D6R8Y8 96 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 TNFRSF6BO95407 300 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 HBBP68871 147 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 IFITM2Q01629 132 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 RNASE13Q5GAN3 156 aaKnown RBP7.72□□□□□ -1.17
LIG1-217ENST00000599165 BTF3L4Q96K17 158 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 C20orf78Q9BR46 151 aa7.72□□□□□ -1.17
LIG1-217ENST00000599165 CSDC2Q9Y534 153 aaKnown RBP7.72□□□□□ -1.17
LIG1-217ENST00000599165 IGHV3-64A0A075B6Q5 118 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 PPP1R2P9O14990 202 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 PPP1R17O96001 155 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 CKS2P33552 79 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 Q6ZUT4 128 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 SPACA4Q8TDM5 124 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 LINC00526Q96FQ7 95 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 SMIM2Q9BVW6 85 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 AP5S1Q9NUS5 200 aa7.71□□□□□ -1.18
LIG1-217ENST00000599165 ADCYAP1P18509 176 aa7.7□□□□□ -1.18
LIG1-217ENST00000599165 FCER1GP30273 86 aa7.7□□□□□ -1.18
LIG1-217ENST00000599165 RPL39P62891 51 aaKnown RBP7.7□□□□□ -1.18
LIG1-217ENST00000599165 CLLU1Q5K131 121 aa7.7□□□□□ -1.18
LIG1-217ENST00000599165 CFAP161Q6P656 301 aa7.7□□□□□ -1.18
LIG1-217ENST00000599165 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
LIG1-217ENST00000599165 A0A087WYN8 130 aa7.69□□□□□ -1.18
LIG1-217ENST00000599165 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.69□□□□□ -1.18
LIG1-217ENST00000599165 KRTAP29-1A8MX34 341 aaPredicted RBP7.69□□□□□ -1.18
LIG1-217ENST00000599165 COX6A2Q02221 97 aa7.69□□□□□ -1.18
LIG1-217ENST00000599165 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
LIG1-217ENST00000599165 ATP5L2Q7Z4Y8 100 aa7.69□□□□□ -1.18
LIG1-217ENST00000599165 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
LIG1-217ENST00000599165 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
LIG1-217ENST00000599165 RPL37AP61513 92 aaKnown RBP7.68□□□□□ -1.18
LIG1-217ENST00000599165 PNRC1Q12796 327 aaPredicted RBP7.68□□□□□ -1.18
LIG1-217ENST00000599165 OPRPNQ99935 248 aaPredicted RBP7.68□□□□□ -1.18
LIG1-217ENST00000599165 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
LIG1-217ENST00000599165 IGHV1-58A0A0C4DH39 117 aa7.67□□□□□ -1.18
LIG1-217ENST00000599165 F8W036 122 aa7.67□□□□□ -1.18
LIG1-217ENST00000599165 PHOX2AO14813 284 aa7.67□□□□□ -1.18
LIG1-217ENST00000599165 TCAPO15273 167 aa7.67□□□□□ -1.18
LIG1-217ENST00000599165 S100A8P05109 93 aa7.67□□□□□ -1.18
LIG1-217ENST00000599165 SS18Q15532 418 aa7.67□□□□□ -1.18
LIG1-217ENST00000599165 A0A096LNI7 61 aa7.66□□□□□ -1.18
LIG1-217ENST00000599165 PPBPP02775 128 aa7.66□□□□□ -1.18
LIG1-217ENST00000599165 RAB14P61106 215 aa7.66□□□□□ -1.18
LIG1-217ENST00000599165 ANAPC16Q96DE5 110 aa7.66□□□□□ -1.18
LIG1-217ENST00000599165 TRAV13-1A0A0B4J241 112 aa7.65□□□□□ -1.18
LIG1-217ENST00000599165 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
LIG1-217ENST00000599165 C1orf196B1AJZ1 125 aa7.65□□□□□ -1.18
LIG1-217ENST00000599165 TMEM136Q6ZRR5 245 aa7.65□□□□□ -1.18
LIG1-217ENST00000599165 ORMDL3Q8N138 153 aa7.65□□□□□ -1.18
LIG1-217ENST00000599165 PRELID3AQ96N28 172 aa7.65□□□□□ -1.18
LIG1-217ENST00000599165 HMCN2Q8NDA2 5059 aa7.65□□□□□ -1.19
LIG1-217ENST00000599165 IGKV2-24A0A0C4DH68 120 aa7.64□□□□□ -1.19
LIG1-217ENST00000599165 MT-ND4LP03901 98 aa7.64□□□□□ -1.19
LIG1-217ENST00000599165 MRPS36P82909 103 aaKnown RBP7.64□□□□□ -1.19
LIG1-217ENST00000599165 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
LIG1-217ENST00000599165 COX7A2LO14548 114 aa7.63□□□□□ -1.19
LIG1-217ENST00000599165 Q6ZRU5 148 aa7.63□□□□□ -1.19
LIG1-217ENST00000599165 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
LIG1-217ENST00000599165 CARD19Q96LW7 228 aa7.63□□□□□ -1.19
LIG1-217ENST00000599165 SPANXA1Q9NS26 97 aa7.63□□□□□ -1.19
LIG1-217ENST00000599165 IGHV3OR16-9A0A0B4J2B5 98 aa7.62□□□□□ -1.19
LIG1-217ENST00000599165 TMEM218A2RU14 115 aa7.62□□□□□ -1.19
LIG1-217ENST00000599165 J3QL48 77 aa7.62□□□□□ -1.19
LIG1-217ENST00000599165 SYCNQ0VAF6 134 aa7.62□□□□□ -1.19
LIG1-217ENST00000599165 MAJINQ3KP22 176 aa7.62□□□□□ -1.19
LIG1-217ENST00000599165 TMEM18Q96B42 140 aa7.62□□□□□ -1.19
LIG1-217ENST00000599165 IGLV4-3A0A075B6K6 122 aa7.61□□□□□ -1.19
LIG1-217ENST00000599165 LOC389332A0A1B0GUA5 103 aa7.61□□□□□ -1.19
LIG1-217ENST00000599165 SMAGPQ0VAQ4 97 aa7.61□□□□□ -1.19
LIG1-217ENST00000599165 UQCC3Q6UW78 93 aa7.61□□□□□ -1.19
LIG1-217ENST00000599165 LAMTOR2Q9Y2Q5 125 aa7.61□□□□□ -1.19
LIG1-217ENST00000599165 ZNF561-AS1K7EIQ3 104 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 OXTP01178 125 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 LINC00173Q6ZV60 143 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 STPG4Q8N801 248 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms