RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZNF664Q8N3J9 261 aa9.15□□□□□ -0.94
SCAF1-203ENST00000598359 MRAP2Q96G30 205 aa9.15□□□□□ -0.94
SCAF1-203ENST00000598359 IGLV5-52A0A0A0MRZ9 124 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 LAGE3Q14657 143 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 ZNF56Q15929 161 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 Q8N814 137 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
SCAF1-203ENST00000598359 A0A096LNJ9 63 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 LEPROTL1O95214 131 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 NCR2O95944 276 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 IFI27P40305 119 aaPredicted RBP9.13□□□□□ -0.95
SCAF1-203ENST00000598359 UBE2D3P61077 147 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 UBE2D2P62837 147 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
SCAF1-203ENST00000598359 NRACQ8N912 160 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
SCAF1-203ENST00000598359 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
SCAF1-203ENST00000598359 NXT2Q9NPJ8 142 aaKnown RBP9.13□□□□□ -0.95
SCAF1-203ENST00000598359 TRBV10-1A0A0K0K1A3 114 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 SMR3BP02814 79 aaPredicted RBP9.12□□□□□ -0.95
SCAF1-203ENST00000598359 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 TM2D2Q9BX73 214 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 HSPB8Q9UJY1 196 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 KLK12Q9UKR0 248 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
SCAF1-203ENST00000598359 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
SCAF1-203ENST00000598359 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
SCAF1-203ENST00000598359 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
SCAF1-203ENST00000598359 F5H697 171 aa9.11□□□□□ -0.95
SCAF1-203ENST00000598359 Q8N8P6 123 aa9.11□□□□□ -0.95
SCAF1-203ENST00000598359 DNAH8Q96JB1 4490 aa9.11□□□□□ -0.95
SCAF1-203ENST00000598359 SYS1-DBNDD2H3BUS1 97 aa9.1□□□□□ -0.95
SCAF1-203ENST00000598359 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
SCAF1-203ENST00000598359 HBDP02042 147 aa9.1□□□□□ -0.95
SCAF1-203ENST00000598359 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
SCAF1-203ENST00000598359 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
SCAF1-203ENST00000598359 BAALCQ8WXS3 180 aa9.1□□□□□ -0.95
SCAF1-203ENST00000598359 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
SCAF1-203ENST00000598359 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
SCAF1-203ENST00000598359 A0A087WX48 190 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 DDTP30046 118 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 UBE2WQ96B02 151 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 C20orf78Q9BR46 151 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 VAMP8Q9BV40 100 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
SCAF1-203ENST00000598359 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 TMEM262E9PQX1 116 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 K7EMI3 77 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 PPP1R17O96001 155 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 MGPP08493 103 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
SCAF1-203ENST00000598359 Q5VSD8 79 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 MAP1LC3CQ9BXW4 147 aa9.08□□□□□ -0.96
SCAF1-203ENST00000598359 C20orf202A1L168 122 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 SMIM17P0DL12 118 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 FCER1GP30273 86 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 NTM-AS1Q6ZSK4 140 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
SCAF1-203ENST00000598359 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
SCAF1-203ENST00000598359 INAFM2P0DMQ5 153 aa9.06□□□□□ -0.96
SCAF1-203ENST00000598359 MPV17L2Q567V2 206 aa9.06□□□□□ -0.96
SCAF1-203ENST00000598359 MYCBP2O75592 4640 aa9.05□□□□□ -0.96
SCAF1-203ENST00000598359 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
SCAF1-203ENST00000598359 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
SCAF1-203ENST00000598359 RMI2Q96E14 147 aa9.05□□□□□ -0.96
SCAF1-203ENST00000598359 CHCHD5Q9BSY4 110 aa9.05□□□□□ -0.96
SCAF1-203ENST00000598359 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
SCAF1-203ENST00000598359 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
SCAF1-203ENST00000598359 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
SCAF1-203ENST00000598359 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
SCAF1-203ENST00000598359 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
SCAF1-203ENST00000598359 PAM16Q9Y3D7 125 aa9.04□□□□□ -0.96
SCAF1-203ENST00000598359 M0QY20 66 aa9.03□□□□□ -0.96
SCAF1-203ENST00000598359 ANGP03950 147 aaKnown RBP9.03□□□□□ -0.96
SCAF1-203ENST00000598359 GAGE6Q13070 117 aa9.03□□□□□ -0.96
SCAF1-203ENST00000598359 SPATA45Q537H7 98 aa9.03□□□□□ -0.96
SCAF1-203ENST00000598359 CLPSL2Q6UWE3 100 aa9.03□□□□□ -0.96
SCAF1-203ENST00000598359 MIEN1Q9BRT3 115 aa9.03□□□□□ -0.96
SCAF1-203ENST00000598359 COX11Q9Y6N1 276 aa9.03□□□□□ -0.96
SCAF1-203ENST00000598359 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
SCAF1-203ENST00000598359 MRPL52Q86TS9 123 aaKnown RBP9.02□□□□□ -0.97
SCAF1-203ENST00000598359 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
SCAF1-203ENST00000598359 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
SCAF1-203ENST00000598359 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
SCAF1-203ENST00000598359 CRPP02741 224 aa9.01□□□□□ -0.97
SCAF1-203ENST00000598359 IGLC3P0DOY3 106 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms