RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TRAV8-3A0A0A6YYJ7 113 aa10.75□□□□□ -0.69
SHKBP1-215ENST00000597649 VCYO14598 125 aa10.75□□□□□ -0.69
SHKBP1-215ENST00000597649 NPYP01303 97 aa10.75□□□□□ -0.69
SHKBP1-215ENST00000597649 YPEL4Q96NS1 127 aa10.75□□□□□ -0.69
SHKBP1-215ENST00000597649 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
SHKBP1-215ENST00000597649 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
SHKBP1-215ENST00000597649 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
SHKBP1-215ENST00000597649 SCO1O75880 301 aa10.74□□□□□ -0.69
SHKBP1-215ENST00000597649 LRP2P98164 4655 aa10.74□□□□□ -0.69
SHKBP1-215ENST00000597649 FCER1GP30273 86 aa10.73□□□□□ -0.69
SHKBP1-215ENST00000597649 AMTP48728 403 aa10.73□□□□□ -0.69
SHKBP1-215ENST00000597649 POLR2KP53803 58 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-215ENST00000597649 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
SHKBP1-215ENST00000597649 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
SHKBP1-215ENST00000597649 MAP1LC3AQ9H492 121 aa10.73□□□□□ -0.69
SHKBP1-215ENST00000597649 TNXBP22105 4242 aa10.72□□□□□ -0.69
SHKBP1-215ENST00000597649 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
SHKBP1-215ENST00000597649 LOC389332A0A1B0GUA5 103 aa10.72□□□□□ -0.69
SHKBP1-215ENST00000597649 TMEM262E9PQX1 116 aa10.72□□□□□ -0.69
SHKBP1-215ENST00000597649 NTM-AS1Q6ZSK4 140 aa10.72□□□□□ -0.69
SHKBP1-215ENST00000597649 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 PKIAP61925 76 aa10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 IQCJQ1A5X6 159 aa10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 Q8N976 141 aa10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 TMEM243Q9BU79 118 aa10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 SMIM2Q9BVW6 85 aa10.71□□□□□ -0.69
SHKBP1-215ENST00000597649 A0A087WX48 190 aa10.7□□□□□ -0.7
SHKBP1-215ENST00000597649 UBE2L6O14933 153 aa10.7□□□□□ -0.7
SHKBP1-215ENST00000597649 TCAPO15273 167 aa10.7□□□□□ -0.7
SHKBP1-215ENST00000597649 COLCA2A8K830 154 aa10.69□□□□□ -0.7
SHKBP1-215ENST00000597649 TSHBP01222 138 aa10.69□□□□□ -0.7
SHKBP1-215ENST00000597649 RAB5AP20339 215 aa10.69□□□□□ -0.7
SHKBP1-215ENST00000597649 ALKBH7Q9BT30 221 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-215ENST00000597649 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
SHKBP1-215ENST00000597649 GAGE6Q13070 117 aa10.68□□□□□ -0.7
SHKBP1-215ENST00000597649 COX11Q9Y6N1 276 aa10.68□□□□□ -0.7
SHKBP1-215ENST00000597649 IGKV2D-24A0A075B6R9 120 aa10.67□□□□□ -0.7
SHKBP1-215ENST00000597649 NIT1Q86X76 327 aa10.67□□□□□ -0.7
SHKBP1-215ENST00000597649 Q8N8P6 123 aa10.67□□□□□ -0.7
SHKBP1-215ENST00000597649 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
SHKBP1-215ENST00000597649 NXT2Q9NPJ8 142 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-215ENST00000597649 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
SHKBP1-215ENST00000597649 CHCHD7Q9BUK0 85 aa10.66□□□□□ -0.7
SHKBP1-215ENST00000597649 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
SHKBP1-215ENST00000597649 TRGC2P03986 189 aa10.65□□□□□ -0.7
SHKBP1-215ENST00000597649 MT1HL1P0DM35 61 aa10.65□□□□□ -0.7
SHKBP1-215ENST00000597649 TMEM18Q96B42 140 aa10.65□□□□□ -0.7
SHKBP1-215ENST00000597649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 H7C423 109 aa10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 IFI27P40305 119 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 RPL37AP61513 92 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 SMAGPQ0VAQ4 97 aa10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 RMI2Q96E14 147 aa10.64□□□□□ -0.71
SHKBP1-215ENST00000597649 ESDP10768 282 aa10.63□□□□□ -0.71
SHKBP1-215ENST00000597649 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
SHKBP1-215ENST00000597649 RNASEKQ6P5S7 137 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-215ENST00000597649 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
SHKBP1-215ENST00000597649 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
SHKBP1-215ENST00000597649 K7EMI3 77 aa10.62□□□□□ -0.71
SHKBP1-215ENST00000597649 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-215ENST00000597649 RBX1P62877 108 aa10.62□□□□□ -0.71
SHKBP1-215ENST00000597649 ORMDL2Q53FV1 153 aa10.62□□□□□ -0.71
SHKBP1-215ENST00000597649 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
SHKBP1-215ENST00000597649 FGF6P10767 208 aa10.61□□□□□ -0.71
SHKBP1-215ENST00000597649 DGAT2L7PQ6IED9 249 aa10.61□□□□□ -0.71
SHKBP1-215ENST00000597649 C18orf32Q8TCD1 76 aa10.61□□□□□ -0.71
SHKBP1-215ENST00000597649 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
SHKBP1-215ENST00000597649 G0S2P27469 103 aa10.6□□□□□ -0.71
SHKBP1-215ENST00000597649 RAB5BP61020 215 aa10.6□□□□□ -0.71
SHKBP1-215ENST00000597649 C20orf203Q8NBC4 194 aa10.6□□□□□ -0.71
SHKBP1-215ENST00000597649 CRPP02741 224 aa10.59□□□□□ -0.71
SHKBP1-215ENST00000597649 ZNF25P17030 456 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-215ENST00000597649 ENHOQ6UWT2 76 aa10.59□□□□□ -0.71
SHKBP1-215ENST00000597649 OR5A1Q8NGJ0 315 aa10.59□□□□□ -0.71
SHKBP1-215ENST00000597649 PANO1I0J062 215 aa10.58□□□□□ -0.72
SHKBP1-215ENST00000597649 IGLV4-60A0A075B6I1 120 aa10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 LINC00614P0C842 121 aa10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 RPL39P62891 51 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 Q0VG73 95 aa10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 MRPL52Q86TS9 123 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 BAGE3Q86Y29 109 aa10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 AP5S1Q9NUS5 200 aa10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 CYSLTR1Q9Y271 337 aa10.57□□□□□ -0.72
SHKBP1-215ENST00000597649 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
SHKBP1-215ENST00000597649 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
SHKBP1-215ENST00000597649 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
SHKBP1-215ENST00000597649 UBE2D4Q9Y2X8 147 aa10.56□□□□□ -0.72
SHKBP1-215ENST00000597649 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-215ENST00000597649 USP17L23D6RBM5 183 aa10.55□□□□□ -0.72
SHKBP1-215ENST00000597649 PRSS1P07477 247 aa10.55□□□□□ -0.72
SHKBP1-215ENST00000597649 C14orf177Q52M58 125 aa10.55□□□□□ -0.72
SHKBP1-215ENST00000597649 CLPSL2Q6UWE3 100 aa10.55□□□□□ -0.72
SHKBP1-215ENST00000597649 SPANXA1Q9NS26 97 aa10.55□□□□□ -0.72
SHKBP1-215ENST00000597649 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
SHKBP1-215ENST00000597649 LINC01546A6NGU7 62 aa10.54□□□□□ -0.72
SHKBP1-215ENST00000597649 REG3AQ06141 175 aa10.54□□□□□ -0.72
SHKBP1-215ENST00000597649 ZNF664Q8N3J9 261 aa10.54□□□□□ -0.72
SHKBP1-215ENST00000597649 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms