RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
PPFIA4-208ENST00000597023 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
PPFIA4-208ENST00000597023 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
PPFIA4-208ENST00000597023 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
PPFIA4-208ENST00000597023 TSHBP01222 138 aa9.97□□□□□ -0.81
PPFIA4-208ENST00000597023 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
PPFIA4-208ENST00000597023 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
PPFIA4-208ENST00000597023 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
PPFIA4-208ENST00000597023 CCL25O15444 150 aa9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 CHTF8P0CG12 524 aa9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 FCER1GP30273 86 aa9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 PNRC1Q12796 327 aaPredicted RBP9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.82
PPFIA4-208ENST00000597023 C20orf78Q9BR46 151 aa9.95□□□□□ -0.82
PPFIA4-208ENST00000597023 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 C7orf77A4D0Y5 90 aa9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 PPBPP02775 128 aa9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 ESDP10768 282 aa9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
PPFIA4-208ENST00000597023 CKS2P33552 79 aa9.93□□□□□ -0.82
PPFIA4-208ENST00000597023 XCL1P47992 114 aa9.93□□□□□ -0.82
PPFIA4-208ENST00000597023 HNRNPA3P51991 378 aaKnown RBP9.93□□□□□ -0.82
PPFIA4-208ENST00000597023 HBBP68871 147 aa9.93□□□□□ -0.82
PPFIA4-208ENST00000597023 ATP5L2Q7Z4Y8 100 aa9.93□□□□□ -0.82
PPFIA4-208ENST00000597023 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
PPFIA4-208ENST00000597023 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 PHOX2AO14813 284 aa9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 CAMPP49913 170 aa9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 RPL32P62910 135 aaKnown RBP9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 FOXI1Q12951 378 aa9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 SS18Q15532 418 aa9.92□□□□□ -0.82
PPFIA4-208ENST00000597023 MT-ND4LP03901 98 aa9.91□□□□□ -0.82
PPFIA4-208ENST00000597023 COX6A2Q02221 97 aa9.91□□□□□ -0.82
PPFIA4-208ENST00000597023 NRACQ8N912 160 aa9.91□□□□□ -0.82
PPFIA4-208ENST00000597023 ANAPC16Q96DE5 110 aa9.91□□□□□ -0.82
PPFIA4-208ENST00000597023 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
PPFIA4-208ENST00000597023 LRP1Q07954 4544 aaKnown RBP9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 A0A087WYN8 130 aa9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 MRPL51Q4U2R6 128 aaKnown RBP9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 PRSS3P2Q8NHM4 247 aa9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.82
PPFIA4-208ENST00000597023 C1orf196B1AJZ1 125 aa9.89□□□□□ -0.83
PPFIA4-208ENST00000597023 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
PPFIA4-208ENST00000597023 IGKV2-24A0A0C4DH68 120 aa9.88□□□□□ -0.83
PPFIA4-208ENST00000597023 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
PPFIA4-208ENST00000597023 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
PPFIA4-208ENST00000597023 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
PPFIA4-208ENST00000597023 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
PPFIA4-208ENST00000597023 MRPL54Q6P161 138 aaKnown RBP9.87□□□□□ -0.83
PPFIA4-208ENST00000597023 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
PPFIA4-208ENST00000597023 LAMTOR2Q9Y2Q5 125 aa9.87□□□□□ -0.83
PPFIA4-208ENST00000597023 FAT3Q8TDW7 4589 aa9.87□□□□□ -0.83
PPFIA4-208ENST00000597023 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 RAB5AP20339 215 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 CLLU1Q5K131 121 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 ORMDL3Q8N138 153 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 PKHD1L1Q86WI1 4243 aa9.86□□□□□ -0.83
PPFIA4-208ENST00000597023 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
PPFIA4-208ENST00000597023 TNFRSF6BO95407 300 aa9.85□□□□□ -0.83
PPFIA4-208ENST00000597023 OXTP01178 125 aa9.85□□□□□ -0.83
PPFIA4-208ENST00000597023 UBE2D4Q9Y2X8 147 aa9.85□□□□□ -0.83
PPFIA4-208ENST00000597023 TMEM136Q6ZRR5 245 aa9.84□□□□□ -0.83
PPFIA4-208ENST00000597023 A0A096LNI7 61 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 D6R8Y8 96 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 ZNF561-AS1K7EIQ3 104 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 APOMO95445 188 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 MALP21145 153 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 Q6ZUT4 128 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 IMMP2LQ96T52 175 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 SMIM2Q9BVW6 85 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 SPANXA1Q9NS26 97 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
PPFIA4-208ENST00000597023 G0S2P27469 103 aa9.82□□□□□ -0.84
PPFIA4-208ENST00000597023 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
PPFIA4-208ENST00000597023 STPG4Q8N801 248 aa9.82□□□□□ -0.84
PPFIA4-208ENST00000597023 K7EMI3 77 aa9.81□□□□□ -0.84
PPFIA4-208ENST00000597023 COX7A2LO14548 114 aa9.81□□□□□ -0.84
PPFIA4-208ENST00000597023 NPYP01303 97 aa9.81□□□□□ -0.84
PPFIA4-208ENST00000597023 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
PPFIA4-208ENST00000597023 CARD19Q96LW7 228 aa9.81□□□□□ -0.84
PPFIA4-208ENST00000597023 PRELID3AQ96N28 172 aa9.81□□□□□ -0.84
PPFIA4-208ENST00000597023 PRSS47A8MTI9 375 aa9.8□□□□□ -0.84
PPFIA4-208ENST00000597023 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
PPFIA4-208ENST00000597023 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
PPFIA4-208ENST00000597023 CTDSP1Q9GZU7 261 aa9.8□□□□□ -0.84
PPFIA4-208ENST00000597023 IGLV4-69A0A075B6H9 119 aa9.79□□□□□ -0.84
PPFIA4-208ENST00000597023 F8WDY8 70 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms