RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 BIN3Q9NQY0 253 aa11.92□□□□□ -0.5
PRKCSH-216ENST00000592445 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-216ENST00000592445 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
PRKCSH-216ENST00000592445 NUP35Q8NFH5 326 aa11.91□□□□□ -0.5
PRKCSH-216ENST00000592445 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
PRKCSH-216ENST00000592445 IGLV7-43P04211 117 aa11.9□□□□□ -0.5
PRKCSH-216ENST00000592445 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
PRKCSH-216ENST00000592445 MRAP2Q96G30 205 aa11.89□□□□□ -0.51
PRKCSH-216ENST00000592445 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
PRKCSH-216ENST00000592445 FAT4Q6V0I7 4981 aa11.88□□□□□ -0.51
PRKCSH-216ENST00000592445 COX7A2LO14548 114 aa11.88□□□□□ -0.51
PRKCSH-216ENST00000592445 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-216ENST00000592445 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
PRKCSH-216ENST00000592445 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
PRKCSH-216ENST00000592445 H0Y9J4 135 aa11.87□□□□□ -0.51
PRKCSH-216ENST00000592445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-216ENST00000592445 SMLR1H3BR10 107 aa11.87□□□□□ -0.51
PRKCSH-216ENST00000592445 ESDP10768 282 aa11.87□□□□□ -0.51
PRKCSH-216ENST00000592445 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-216ENST00000592445 TRBV20OR9-2A0A075B6H5 130 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 IGLV1-50A0A075B6I6 118 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 A0A087WZ39 114 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 BCL2L11O43521 198 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 ZNF345Q14585 488 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 MED9Q9NWA0 146 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
PRKCSH-216ENST00000592445 TSHBP01222 138 aa11.85□□□□□ -0.51
PRKCSH-216ENST00000592445 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-216ENST00000592445 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-216ENST00000592445 KANTRA0A1W2PQU2 76 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 C1orf196B1AJZ1 125 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 PDE6DO43924 150 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 UBE2D1P51668 147 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
PRKCSH-216ENST00000592445 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
PRKCSH-216ENST00000592445 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-216ENST00000592445 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
PRKCSH-216ENST00000592445 TRAV1-1A0A0B4J248 108 aa11.81□□□□□ -0.52
PRKCSH-216ENST00000592445 KRTAP9-6A0A140TA67 174 aa11.81□□□□□ -0.52
PRKCSH-216ENST00000592445 C7orf77A4D0Y5 90 aa11.81□□□□□ -0.52
PRKCSH-216ENST00000592445 FAM210AQ96ND0 272 aa11.81□□□□□ -0.52
PRKCSH-216ENST00000592445 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
PRKCSH-216ENST00000592445 C5orf38Q86SI9 138 aa11.8□□□□□ -0.52
PRKCSH-216ENST00000592445 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
PRKCSH-216ENST00000592445 KRTAP1-4P0C5Y4 121 aa11.79□□□□□ -0.52
PRKCSH-216ENST00000592445 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
PRKCSH-216ENST00000592445 RNF151Q2KHN1 245 aa11.79□□□□□ -0.52
PRKCSH-216ENST00000592445 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
PRKCSH-216ENST00000592445 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
PRKCSH-216ENST00000592445 KRTAP11-1Q8IUC1 163 aa11.78□□□□□ -0.52
PRKCSH-216ENST00000592445 HMSDA8MTL9 139 aa11.76□□□□□ -0.53
PRKCSH-216ENST00000592445 K7EN84 100 aa11.76□□□□□ -0.53
PRKCSH-216ENST00000592445 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
PRKCSH-216ENST00000592445 FAM19A5Q7Z5A7 132 aaPredicted RBP11.76□□□□□ -0.53
PRKCSH-216ENST00000592445 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
PRKCSH-216ENST00000592445 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
PRKCSH-216ENST00000592445 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
PRKCSH-216ENST00000592445 FCER1GP30273 86 aa11.75□□□□□ -0.53
PRKCSH-216ENST00000592445 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
PRKCSH-216ENST00000592445 LCE2AQ5TA79 106 aaPredicted RBP11.74□□□□□ -0.53
PRKCSH-216ENST00000592445 OR10D4PQ8NGN7 298 aa11.74□□□□□ -0.53
PRKCSH-216ENST00000592445 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
PRKCSH-216ENST00000592445 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
PRKCSH-216ENST00000592445 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
PRKCSH-216ENST00000592445 GATCO43716 136 aaKnown RBP11.73□□□□□ -0.53
PRKCSH-216ENST00000592445 UBE2BP63146 152 aa11.73□□□□□ -0.53
PRKCSH-216ENST00000592445 UBE2D4Q9Y2X8 147 aa11.73□□□□□ -0.53
PRKCSH-216ENST00000592445 A8MWL6 223 aa11.72□□□□□ -0.53
PRKCSH-216ENST00000592445 ORAOV1Q8WV07 137 aa11.72□□□□□ -0.53
PRKCSH-216ENST00000592445 VCYO14598 125 aa11.71□□□□□ -0.53
PRKCSH-216ENST00000592445 NDUFA1O15239 70 aa11.71□□□□□ -0.53
PRKCSH-216ENST00000592445 TSPAN13O95857 204 aa11.71□□□□□ -0.53
PRKCSH-216ENST00000592445 GAGE2EQ4V326 116 aa11.71□□□□□ -0.53
PRKCSH-216ENST00000592445 GAGE2DQ9UEU5 116 aa11.71□□□□□ -0.53
PRKCSH-216ENST00000592445 F8WDY8 70 aa11.7□□□□□ -0.54
PRKCSH-216ENST00000592445 Q6ZUT4 128 aa11.7□□□□□ -0.54
PRKCSH-216ENST00000592445 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
PRKCSH-216ENST00000592445 M0QXV9 152 aa11.69□□□□□ -0.54
PRKCSH-216ENST00000592445 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
PRKCSH-216ENST00000592445 C10orf25Q5T742 122 aa11.69□□□□□ -0.54
PRKCSH-216ENST00000592445 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
PRKCSH-216ENST00000592445 TLX1NBP0CAT3 122 aa11.68□□□□□ -0.54
PRKCSH-216ENST00000592445 RAB4AP20338 218 aa11.68□□□□□ -0.54
PRKCSH-216ENST00000592445 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-216ENST00000592445 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
PRKCSH-216ENST00000592445 AMN1Q8IY45 258 aa11.67□□□□□ -0.54
PRKCSH-216ENST00000592445 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
PRKCSH-216ENST00000592445 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
PRKCSH-216ENST00000592445 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
PRKCSH-216ENST00000592445 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
PRKCSH-216ENST00000592445 SMDT1Q9H4I9 107 aa11.66□□□□□ -0.54
PRKCSH-216ENST00000592445 C6orf48Q9UBA6 75 aa11.66□□□□□ -0.54
PRKCSH-216ENST00000592445 RGS21Q2M5E4 152 aa11.65□□□□□ -0.54
PRKCSH-216ENST00000592445 FAM231DQ6ZW35 169 aa11.65□□□□□ -0.54
PRKCSH-216ENST00000592445 KRTAP7-1Q8IUC3 87 aa11.65□□□□□ -0.54
PRKCSH-216ENST00000592445 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
PRKCSH-216ENST00000592445 PPP1R17O96001 155 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms