RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	CIRBP	Q14011	172 aa	Known RBP	10.17	□□□□□ -0.78
TMEM259-206	ENST00000589055	RNF213	Q63HN8	5207 aa		10.17	□□□□□ -0.78
TMEM259-206	ENST00000589055	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	ZNF25	P17030	456 aa	Predicted RBP	10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	NRAC	Q8N912	160 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	OR5A1	Q8NGJ0	315 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	LINC00526	Q96FQ7	95 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	TMEM101	Q96IK0	257 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	BTF3L4	Q96K17	158 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	NAT8	Q9UHE5	227 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	NAT8B	Q9UHF3	227 aa		10.16	□□□□□ -0.78
TMEM259-206	ENST00000589055	TRBV27	A0A0K0K1C4	114 aa		10.15	□□□□□ -0.78
TMEM259-206	ENST00000589055	LINC00959	A0A1B0GUT2	108 aa		10.15	□□□□□ -0.78
TMEM259-206	ENST00000589055	C7orf77	A4D0Y5	90 aa		10.15	□□□□□ -0.78
TMEM259-206	ENST00000589055	CCL25	O15444	150 aa		10.15	□□□□□ -0.78
TMEM259-206	ENST00000589055	FAM74A3	Q4VXF1	159 aa		10.15	□□□□□ -0.78
TMEM259-206	ENST00000589055	SPACA4	Q8TDM5	124 aa		10.15	□□□□□ -0.78
TMEM259-206	ENST00000589055		A0A087WYN8	130 aa		10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	CAMP	P49913	170 aa		10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	COX6A2	Q02221	97 aa		10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	MRPL51	Q4U2R6	128 aa	Known RBP	10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	RNASE13	Q5GAN3	156 aa	Known RBP	10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	CFAP161	Q6P656	301 aa		10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	PRSS3P2	Q8NHM4	247 aa		10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	DPH3	Q96FX2	82 aa		10.14	□□□□□ -0.79
TMEM259-206	ENST00000589055	SMIM27	A0A1W2PRY6	76 aa		10.13	□□□□□ -0.79
TMEM259-206	ENST00000589055	MRPL52	Q86TS9	123 aa	Known RBP	10.13	□□□□□ -0.79
TMEM259-206	ENST00000589055	CDC42SE2	Q9NRR3	84 aa		10.13	□□□□□ -0.79
TMEM259-206	ENST00000589055	IGKV2-24	A0A0C4DH68	120 aa		10.12	□□□□□ -0.79
TMEM259-206	ENST00000589055	FCER1G	P30273	86 aa		10.12	□□□□□ -0.79
TMEM259-206	ENST00000589055	SUMO2	P61956	95 aa	Known RBP	10.12	□□□□□ -0.79
TMEM259-206	ENST00000589055	PEA15	Q15121	130 aa		10.12	□□□□□ -0.79
TMEM259-206	ENST00000589055	FAM104B	Q5XKR9	115 aa		10.12	□□□□□ -0.79
TMEM259-206	ENST00000589055	VCY	O14598	125 aa		10.11	□□□□□ -0.79
TMEM259-206	ENST00000589055	MRPL54	Q6P161	138 aa	Known RBP	10.11	□□□□□ -0.79
TMEM259-206	ENST00000589055	ZNF664	Q8N3J9	261 aa		10.11	□□□□□ -0.79
TMEM259-206	ENST00000589055	UBE2D4	Q9Y2X8	147 aa		10.1	□□□□□ -0.79
TMEM259-206	ENST00000589055		A0A096LNI7	61 aa		10.09	□□□□□ -0.79
TMEM259-206	ENST00000589055	SS18	Q15532	418 aa		10.09	□□□□□ -0.79
TMEM259-206	ENST00000589055	MAJIN	Q3KP22	176 aa		10.09	□□□□□ -0.79
TMEM259-206	ENST00000589055		Q6ZUT4	128 aa		10.09	□□□□□ -0.79
TMEM259-206	ENST00000589055	IGHV1-58	A0A0C4DH39	117 aa		10.08	□□□□□ -0.8
TMEM259-206	ENST00000589055	OXT	P01178	125 aa		10.08	□□□□□ -0.8
TMEM259-206	ENST00000589055	CD164L2	Q6UWJ8	174 aa		10.08	□□□□□ -0.8
TMEM259-206	ENST00000589055	KIR2DL4	Q99706	377 aa		10.08	□□□□□ -0.8
TMEM259-206	ENST00000589055	PLAC8	Q9NZF1	115 aa		10.08	□□□□□ -0.8
TMEM259-206	ENST00000589055	PHOX2A	O14813	284 aa		10.07	□□□□□ -0.8
TMEM259-206	ENST00000589055	CKS2	P33552	79 aa		10.07	□□□□□ -0.8
TMEM259-206	ENST00000589055	TRAV13-1	A0A0B4J241	112 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055		A0A1B0GXF2	115 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055		D6R8Y8	96 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	PPP1R2P9	O14990	202 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	TNFRSF6B	O95407	300 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	PPP1R17	O96001	155 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	NPY	P01303	97 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	RPL39	P62891	51 aa	Known RBP	10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	HBB	P68871	147 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	CARD19	Q96LW7	228 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	SMDT1	Q9H4I9	107 aa		10.06	□□□□□ -0.8
TMEM259-206	ENST00000589055	STPG4	Q8N801	248 aa		10.05	□□□□□ -0.8
TMEM259-206	ENST00000589055	TRBV24-1	A0A075B6N3	115 aa		10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055		A0A1B0GW15	77 aa		10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	LINC00862	A6NCI5	91 aa		10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	FAM104A	Q969W3	186 aa		10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	OPRPN	Q99935	248 aa	Predicted RBP	10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	C20orf78	Q9BR46	151 aa		10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	SMIM2	Q9BVW6	85 aa		10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	CSDC2	Q9Y534	153 aa	Known RBP	10.04	□□□□□ -0.8
TMEM259-206	ENST00000589055	ZNF561-AS1	K7EIQ3	104 aa		10.03	□□□□□ -0.8
TMEM259-206	ENST00000589055	COX7A2L	O14548	114 aa		10.03	□□□□□ -0.8
TMEM259-206	ENST00000589055	C5orf38	Q86SI9	138 aa		10.03	□□□□□ -0.8
TMEM259-206	ENST00000589055	IGLV4-69	A0A075B6H9	119 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	C1orf196	B1AJZ1	125 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	TCAP	O15273	167 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	MAL	P21145	153 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	RPL32	P62910	135 aa	Known RBP	10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	SYCN	Q0VAF6	134 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055		Q6ZRU5	148 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	C7orf33	Q8WU49	177 aa		10.02	□□□□□ -0.81
TMEM259-206	ENST00000589055	TIMM21	Q9BVV7	248 aa		10.01	□□□□□ -0.81
TMEM259-206	ENST00000589055		F8W036	122 aa		10	□□□□□ -0.81
TMEM259-206	ENST00000589055	S100A8	P05109	93 aa		10	□□□□□ -0.81
TMEM259-206	ENST00000589055	MT1HL1	P0DM35	61 aa		10	□□□□□ -0.81
TMEM259-206	ENST00000589055	SMAGP	Q0VAQ4	97 aa		10	□□□□□ -0.81
TMEM259-206	ENST00000589055	TMEM18	Q96B42	140 aa		10	□□□□□ -0.81
TMEM259-206	ENST00000589055	PRR3	P79522	188 aa	Known RBP	9.99	□□□□□ -0.81
TMEM259-206	ENST00000589055	GAGE2B	Q13066	116 aa		9.98	□□□□□ -0.81
TMEM259-206	ENST00000589055	PRELID3A	Q96N28	172 aa		9.98	□□□□□ -0.81
TMEM259-206	ENST00000589055	CAMK2N2	Q96S95	79 aa		9.98	□□□□□ -0.81
TMEM259-206	ENST00000589055		A0A0J9YXV3	536 aa		9.97	□□□□□ -0.81
TMEM259-206	ENST00000589055	PTTG1IP	P53801	180 aa		9.97	□□□□□ -0.81
TMEM259-206	ENST00000589055	SPAG11B	Q08648	103 aa		9.97	□□□□□ -0.81
TMEM259-206	ENST00000589055	TMEM136	Q6ZRR5	245 aa		9.97	□□□□□ -0.81
TMEM259-206	ENST00000589055	ATP5L2	Q7Z4Y8	100 aa		9.97	□□□□□ -0.81
TMEM259-206	ENST00000589055	ORMDL3	Q8N138	153 aa		9.97	□□□□□ -0.81
TMEM259-206	ENST00000589055	IFITM10	A6NMD0	228 aa		9.96	□□□□□ -0.82
TMEM259-206	ENST00000589055	PPBP	P02775	128 aa		9.96	□□□□□ -0.82
TMEM259-206	ENST00000589055	SPANXA1	Q9NS26	97 aa		9.96	□□□□□ -0.82
TMEM259-206	ENST00000589055	LINC00474	Q9P2X8	69 aa		9.96	□□□□□ -0.82

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