RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 APOMO95445 188 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 MALP21145 153 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 CCL20P78556 96 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 MEF2BQ02080 365 aaPredicted RBP9.22□□□□□ -0.93
IFT20-216ENST00000588477 SMIM12Q96EX1 92 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 CNFNQ9BYD5 112 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 MANBALQ9NQG1 85 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 CDC42SE2Q9NRR3 84 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 GNG13Q9P2W3 67 aa9.22□□□□□ -0.93
IFT20-216ENST00000588477 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
IFT20-216ENST00000588477 ESDP10768 282 aa9.21□□□□□ -0.94
IFT20-216ENST00000588477 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
IFT20-216ENST00000588477 NUDT10Q8NFP7 164 aa9.21□□□□□ -0.94
IFT20-216ENST00000588477 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
IFT20-216ENST00000588477 A0A087WZ39 114 aa9.2□□□□□ -0.94
IFT20-216ENST00000588477 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
IFT20-216ENST00000588477 TEX261Q6UWH6 196 aa9.2□□□□□ -0.94
IFT20-216ENST00000588477 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
IFT20-216ENST00000588477 MRAP2Q96G30 205 aa9.2□□□□□ -0.94
IFT20-216ENST00000588477 OPRPNQ99935 248 aaPredicted RBP9.2□□□□□ -0.94
IFT20-216ENST00000588477 TRBV20OR9-2A0A075B6H5 130 aa9.19□□□□□ -0.94
IFT20-216ENST00000588477 BIN3Q9NQY0 253 aa9.19□□□□□ -0.94
IFT20-216ENST00000588477 SMLR1H3BR10 107 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 COX7A2LO14548 114 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 BCL2L11O43521 198 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 TSHBP01222 138 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 KRTAP1-4P0C5Y4 121 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
IFT20-216ENST00000588477 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 C2orf48Q96LS8 159 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 TMEM242Q9NWH2 141 aa9.18□□□□□ -0.94
IFT20-216ENST00000588477 C1orf196B1AJZ1 125 aa9.17□□□□□ -0.94
IFT20-216ENST00000588477 UBE2D1P51668 147 aa9.17□□□□□ -0.94
IFT20-216ENST00000588477 MED9Q9NWA0 146 aa9.17□□□□□ -0.94
IFT20-216ENST00000588477 TRAV1-1A0A0B4J248 108 aa9.16□□□□□ -0.94
IFT20-216ENST00000588477 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
IFT20-216ENST00000588477 RNASE7Q9H1E1 156 aaKnown RBP9.16□□□□□ -0.94
IFT20-216ENST00000588477 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
IFT20-216ENST00000588477 ST20Q9HBF5 79 aa9.16□□□□□ -0.94
IFT20-216ENST00000588477 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
IFT20-216ENST00000588477 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
IFT20-216ENST00000588477 ZNF345Q14585 488 aa9.15□□□□□ -0.94
IFT20-216ENST00000588477 C5orf38Q86SI9 138 aa9.15□□□□□ -0.94
IFT20-216ENST00000588477 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
IFT20-216ENST00000588477 C7orf77A4D0Y5 90 aa9.14□□□□□ -0.95
IFT20-216ENST00000588477 PDE6DO43924 150 aa9.14□□□□□ -0.95
IFT20-216ENST00000588477 RNF151Q2KHN1 245 aa9.14□□□□□ -0.95
IFT20-216ENST00000588477 RNASE13Q5GAN3 156 aaKnown RBP9.14□□□□□ -0.95
IFT20-216ENST00000588477 KANTRA0A1W2PQU2 76 aa9.13□□□□□ -0.95
IFT20-216ENST00000588477 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
IFT20-216ENST00000588477 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
IFT20-216ENST00000588477 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
IFT20-216ENST00000588477 TRAV13-1A0A0B4J241 112 aa9.12□□□□□ -0.95
IFT20-216ENST00000588477 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
IFT20-216ENST00000588477 FAM19A5Q7Z5A7 132 aaPredicted RBP9.12□□□□□ -0.95
IFT20-216ENST00000588477 K7EN84 100 aa9.11□□□□□ -0.95
IFT20-216ENST00000588477 TSPAN13O95857 204 aa9.11□□□□□ -0.95
IFT20-216ENST00000588477 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
IFT20-216ENST00000588477 IMMP2LQ96T52 175 aa9.11□□□□□ -0.95
IFT20-216ENST00000588477 TRBV27A0A0K0K1C4 114 aa9.1□□□□□ -0.95
IFT20-216ENST00000588477 TEX46H3BTG2 121 aa9.1□□□□□ -0.95
IFT20-216ENST00000588477 MRPL35Q9NZE8 188 aaKnown RBP9.1□□□□□ -0.95
IFT20-216ENST00000588477 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
IFT20-216ENST00000588477 HMSDA8MTL9 139 aa9.09□□□□□ -0.95
IFT20-216ENST00000588477 UBE2BP63146 152 aa9.09□□□□□ -0.95
IFT20-216ENST00000588477 OR10D4PQ8NGN7 298 aa9.09□□□□□ -0.95
IFT20-216ENST00000588477 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
IFT20-216ENST00000588477 FCER1GP30273 86 aa9.08□□□□□ -0.96
IFT20-216ENST00000588477 GAGE2EQ4V326 116 aa9.08□□□□□ -0.96
IFT20-216ENST00000588477 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
IFT20-216ENST00000588477 ORAOV1Q8WV07 137 aa9.08□□□□□ -0.96
IFT20-216ENST00000588477 GAGE2DQ9UEU5 116 aa9.08□□□□□ -0.96
IFT20-216ENST00000588477 CARHSP1Q9Y2V2 147 aaKnown RBP9.08□□□□□ -0.96
IFT20-216ENST00000588477 NDUFA1O15239 70 aa9.07□□□□□ -0.96
IFT20-216ENST00000588477 GATCO43716 136 aaKnown RBP9.07□□□□□ -0.96
IFT20-216ENST00000588477 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
IFT20-216ENST00000588477 SMAGPQ0VAQ4 97 aa9.07□□□□□ -0.96
IFT20-216ENST00000588477 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
IFT20-216ENST00000588477 F8WDY8 70 aa9.06□□□□□ -0.96
IFT20-216ENST00000588477 M0QXV9 152 aa9.06□□□□□ -0.96
IFT20-216ENST00000588477 VCYO14598 125 aa9.06□□□□□ -0.96
IFT20-216ENST00000588477 RAB4AP20338 218 aa9.06□□□□□ -0.96
IFT20-216ENST00000588477 UNQ6190/PRO20217Q6UXQ8 127 aa9.06□□□□□ -0.96
IFT20-216ENST00000588477 Q6ZUT4 128 aa9.06□□□□□ -0.96
IFT20-216ENST00000588477 A8MWL6 223 aa9.05□□□□□ -0.96
IFT20-216ENST00000588477 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
IFT20-216ENST00000588477 BORCS7Q96B45 105 aa9.05□□□□□ -0.96
IFT20-216ENST00000588477 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
IFT20-216ENST00000588477 C6orf48Q9UBA6 75 aa9.05□□□□□ -0.96
IFT20-216ENST00000588477 SMKR1H3BMG3 65 aa9.04□□□□□ -0.96
IFT20-216ENST00000588477 SMDT1Q9H4I9 107 aa9.04□□□□□ -0.96
IFT20-216ENST00000588477 AMN1Q8IY45 258 aa9.03□□□□□ -0.96
IFT20-216ENST00000588477 FAM231DQ6ZW35 169 aa9.02□□□□□ -0.97
IFT20-216ENST00000588477 KIR2DL4Q99706 377 aa9.02□□□□□ -0.97
IFT20-216ENST00000588477 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
IFT20-216ENST00000588477 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
IFT20-216ENST00000588477 ZNF861PO60384 105 aa9.01□□□□□ -0.97
IFT20-216ENST00000588477 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
IFT20-216ENST00000588477 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
IFT20-216ENST00000588477 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms