RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
HDAC5-208ENST00000588419 TRBV6-5A0A0K0K1A5 114 aa8.55□□□□□ -1.04
HDAC5-208ENST00000588419 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
HDAC5-208ENST00000588419 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
HDAC5-208ENST00000588419 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
HDAC5-208ENST00000588419 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
HDAC5-208ENST00000588419 TCTE3Q8IZS6 198 aa8.55□□□□□ -1.04
HDAC5-208ENST00000588419 C7orf77A4D0Y5 90 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 ESDP10768 282 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 MALP21145 153 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 FCER1GP30273 86 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 CAMPP49913 170 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
HDAC5-208ENST00000588419 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 TMEM250H0YL14 139 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 CD164L2Q6UWJ8 174 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 ZNF664Q8N3J9 261 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
HDAC5-208ENST00000588419 IGLV4-69A0A075B6H9 119 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 A0A0J9YXV3 536 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 BLOC1S1P78537 153 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 CT83Q5H943 113 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 Q6ZRP5 223 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 ISOC2Q96AB3 205 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 SMIM7Q9BQ49 75 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 TMEM191AQ9H0A3 160 aa8.52□□□□□ -1.05
HDAC5-208ENST00000588419 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
HDAC5-208ENST00000588419 RAB4AP20338 218 aa8.51□□□□□ -1.05
HDAC5-208ENST00000588419 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
HDAC5-208ENST00000588419 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
HDAC5-208ENST00000588419 MRPL52Q86TS9 123 aaKnown RBP8.51□□□□□ -1.05
HDAC5-208ENST00000588419 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
HDAC5-208ENST00000588419 CAMK2N2Q96S95 79 aa8.51□□□□□ -1.05
HDAC5-208ENST00000588419 EIF5A2Q9GZV4 153 aaKnown RBP8.51□□□□□ -1.05
HDAC5-208ENST00000588419 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
HDAC5-208ENST00000588419 COX7A2LO14548 114 aa8.5□□□□□ -1.05
HDAC5-208ENST00000588419 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
HDAC5-208ENST00000588419 LRP2P98164 4655 aa8.5□□□□□ -1.05
HDAC5-208ENST00000588419 hCG_2014768A0A024R1R8 64 aa8.49□□□□□ -1.05
HDAC5-208ENST00000588419 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
HDAC5-208ENST00000588419 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
HDAC5-208ENST00000588419 Q6ZUT4 128 aa8.49□□□□□ -1.05
HDAC5-208ENST00000588419 C5orf38Q86SI9 138 aa8.49□□□□□ -1.05
HDAC5-208ENST00000588419 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
HDAC5-208ENST00000588419 C1orf196B1AJZ1 125 aa8.48□□□□□ -1.05
HDAC5-208ENST00000588419 RIGQ13278 110 aa8.48□□□□□ -1.05
HDAC5-208ENST00000588419 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
HDAC5-208ENST00000588419 KIR2DL4Q99706 377 aa8.48□□□□□ -1.05
HDAC5-208ENST00000588419 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
HDAC5-208ENST00000588419 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 VCYO14598 125 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 APOMO95445 188 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 MT-ND6P03923 174 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 SUMO2P61956 95 aaKnown RBP8.47□□□□□ -1.05
HDAC5-208ENST00000588419 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 SMAGPQ0VAQ4 97 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 NUP35Q8NFH5 326 aa8.47□□□□□ -1.05
HDAC5-208ENST00000588419 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
HDAC5-208ENST00000588419 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.06
HDAC5-208ENST00000588419 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
HDAC5-208ENST00000588419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
HDAC5-208ENST00000588419 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
HDAC5-208ENST00000588419 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC5-208ENST00000588419 C1orf137Q5JT78 98 aa8.45□□□□□ -1.06
HDAC5-208ENST00000588419 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
HDAC5-208ENST00000588419 NRACQ8N912 160 aa8.45□□□□□ -1.06
HDAC5-208ENST00000588419 FAM210AQ96ND0 272 aa8.45□□□□□ -1.06
HDAC5-208ENST00000588419 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
HDAC5-208ENST00000588419 V9GYV3 84 aa8.45□□□□□ -1.06
HDAC5-208ENST00000588419 PPP1R17O96001 155 aa8.44□□□□□ -1.06
HDAC5-208ENST00000588419 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
HDAC5-208ENST00000588419 PPP1R2P9O14990 202 aa8.43□□□□□ -1.06
HDAC5-208ENST00000588419 SRP19P09132 144 aaKnown RBP8.43□□□□□ -1.06
HDAC5-208ENST00000588419 ADIRFQ15847 76 aa8.43□□□□□ -1.06
HDAC5-208ENST00000588419 MRPL51Q4U2R6 128 aaKnown RBP8.43□□□□□ -1.06
HDAC5-208ENST00000588419 ORAOV1Q8WV07 137 aa8.43□□□□□ -1.06
HDAC5-208ENST00000588419 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
HDAC5-208ENST00000588419 NAT8BQ9UHF3 227 aa8.43□□□□□ -1.06
HDAC5-208ENST00000588419 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
HDAC5-208ENST00000588419 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
HDAC5-208ENST00000588419 RNF213Q63HN8 5207 aa8.42□□□□□ -1.06
HDAC5-208ENST00000588419 CKS2P33552 79 aa8.41□□□□□ -1.06
HDAC5-208ENST00000588419 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
HDAC5-208ENST00000588419 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
HDAC5-208ENST00000588419 RPL23P62829 140 aaKnown RBP8.4□□□□□ -1.06
HDAC5-208ENST00000588419 TMEM241Q24JQ0 296 aa8.4□□□□□ -1.06
HDAC5-208ENST00000588419 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
HDAC5-208ENST00000588419 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.06
HDAC5-208ENST00000588419 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
HDAC5-208ENST00000588419 NDUFA1O15239 70 aa8.39□□□□□ -1.07
HDAC5-208ENST00000588419 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
HDAC5-208ENST00000588419 MRPL54Q6P161 138 aaKnown RBP8.39□□□□□ -1.07
HDAC5-208ENST00000588419 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
HDAC5-208ENST00000588419 A0A087WZ39 114 aa8.38□□□□□ -1.07
HDAC5-208ENST00000588419 D6R8Y8 96 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms