RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ARMS2P0C7Q2 107 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 HTN3P15516 51 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 UBE2G1P62253 170 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 RPL19P84098 196 aaKnown RBP2.49□□□□□ -2.01
VMP1-205ENST00000587470 COA6Q5JTJ3 125 aaKnown RBP2.49□□□□□ -2.01
VMP1-205ENST00000587470 BAALCQ8WXS3 180 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 SMIM12Q96EX1 92 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 MED9Q9NWA0 146 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 IL36BQ9NZH7 164 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 DNAH6Q9C0G6 4158 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 TMSB15BA0A087X1C1 80 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 A0A096LPF7 62 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 TRAV4A0A0B4J268 109 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 C16orf90A8MZG2 172 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 SNAI2O43623 268 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 IGHV3-53P01767 116 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 CRYGDP07320 174 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 OR5AL1P0C617 328 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 IGLC6P0CF74 106 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 CTRLP40313 264 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 GNG4P50150 75 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 CRYBA4P53673 196 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 LINC00315P59091 139 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 VAMP3Q15836 100 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 CFAP126Q5VTH2 177 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 MAP1LC3CQ9BXW4 147 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 SAMD10Q9BYL1 202 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 EIF5A2Q9GZV4 153 aaKnown RBP2.48□□□□□ -2.01
VMP1-205ENST00000587470 PRO0255Q9UI72 69 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 HHLA3Q9XRX5 114 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 LY96Q9Y6Y9 160 aa2.48□□□□□ -2.01
VMP1-205ENST00000587470 DYNC1H1Q14204 4646 aaKnown RBP2.48□□□□□ -2.01
VMP1-205ENST00000587470 A0A0J9YY99 117 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 H3BVH4 76 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 GZMBP10144 247 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 MGST1P10620 155 aaKnown RBP2.47□□□□□ -2.01
VMP1-205ENST00000587470 S100A4P26447 101 aaKnown RBP2.47□□□□□ -2.01
VMP1-205ENST00000587470 ASIPP42127 132 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 FOXA3P55318 350 aaPredicted RBP2.47□□□□□ -2.01
VMP1-205ENST00000587470 ESRGQ1W209 222 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 CLLU1Q5K131 121 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 FAM231DQ6ZW35 169 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 LINC01551Q86U37 167 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 SLC25A29Q8N8R3 303 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 C15orf53Q8NAA6 179 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 OR2D3Q8NGH3 330 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 OR10AG1Q8NH19 301 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 RNF185Q96GF1 192 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 SFRP2Q96HF1 295 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 SMIM7Q9BQ49 75 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 CNFNQ9BYD5 112 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 RNASE7Q9H1E1 156 aaKnown RBP2.47□□□□□ -2.01
VMP1-205ENST00000587470 SMDT1Q9H4I9 107 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 DAZ3Q9NR90 486 aaKnown RBP2.47□□□□□ -2.01
VMP1-205ENST00000587470 LINC00588Q9Y4M8 146 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 DNAH11Q96DT5 4516 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
VMP1-205ENST00000587470 PKD1P98161 4303 aa2.46□□□□□ -2.01
VMP1-205ENST00000587470 IGHV3-73A0A0B4J1V6 119 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 TRGV4A0A0C4DH28 118 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 MUC21A0A0G2JKD1 596 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 MUC21A0A140T8X8 626 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 TRBV6-4A0A1B0GX49 114 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 ZNF727A8MUV8 499 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 A8MWV9 139 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 F2Z2F3 143 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 M0R381 172 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 P01737 135 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 P0DMU3 169 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 FAM231AP0DMU4 169 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 FAM231CP0DMU5 169 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 LINC00694P0DN24 101 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 RAB5AP20339 215 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 RPS20P60866 119 aaKnown RBP2.46□□□□□ -2.02
VMP1-205ENST00000587470 RPL23P62829 140 aaKnown RBP2.46□□□□□ -2.02
VMP1-205ENST00000587470 PRR3P79522 188 aaKnown RBP2.46□□□□□ -2.02
VMP1-205ENST00000587470 PEA15Q15121 130 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 TMEM241Q24JQ0 296 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 ZFP2Q6ZN57 461 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 ZFP82Q8N141 532 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 FER1L6-AS1Q8NA97 138 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 ZNRF2Q8NHG8 242 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 BIN3Q9NQY0 253 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 OSTCQ9NRP0 149 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 PHLDA3Q9Y5J5 127 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 V9GYV3 84 aa2.46□□□□□ -2.02
VMP1-205ENST00000587470 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 LINC00862A6NCI5 91 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 A8MWL6 223 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 GATCO43716 136 aaKnown RBP2.45□□□□□ -2.02
VMP1-205ENST00000587470 NTF3P20783 257 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 EVI2AP22794 236 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 CEBPGP53567 150 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 RAB14P61106 215 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 LYPD5Q6UWN5 251 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 LYZL1Q6UWQ5 148 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 NEGR1Q7Z3B1 354 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 MRPL55Q7Z7F7 128 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms