RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 A0A087WX48 190 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 DEFB131BA0A096LNP1 70 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 TRBV6-8A0A0A6YYG3 113 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 TRAV8-6A0A0B4J262 113 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 IGKV2-29A2NJV5 120 aaPredicted RBP4.36□□□□□ -1.71
LIG3-206ENST00000586058 SEC11AP67812 179 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 Q6ZTC4 211 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 LINC00173Q6ZV60 143 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 C15orf53Q8NAA6 179 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 BAALCQ8WXS3 180 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 TIMM21Q9BVV7 248 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
LIG3-206ENST00000586058 FBN1P35555 2871 aaKnown RBP4.35□□□□□ -1.71
LIG3-206ENST00000586058 LOC100131303A0A0U1RQF7 123 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 EREGO14944 169 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 FGF6P10767 208 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 C12orf74Q32Q52 190 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 CHCHD7Q9BUK0 85 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 GEMIN7Q9H840 131 aaKnown RBP4.35□□□□□ -1.71
LIG3-206ENST00000586058 UBE2D4Q9Y2X8 147 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 STAB1Q9NY15 2570 aa4.35□□□□□ -1.71
LIG3-206ENST00000586058 NOTCH3Q9UM47 2321 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 A0A096LPF7 62 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 IGIPA6NJ69 53 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 PCP4L1A6NKN8 68 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 TMEM262E9PQX1 116 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 H3BRM9 83 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 LINC00694P0DN24 101 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 NANOS2P60321 138 aaKnown RBP4.34□□□□□ -1.71
LIG3-206ENST00000586058 MRPS36P82909 103 aaKnown RBP4.34□□□□□ -1.71
LIG3-206ENST00000586058 TMEM170BQ5T4T1 132 aa4.34□□□□□ -1.71
LIG3-206ENST00000586058 MRPL52Q86TS9 123 aaKnown RBP4.34□□□□□ -1.71
LIG3-206ENST00000586058 MRPL35Q9NZE8 188 aaKnown RBP4.34□□□□□ -1.71
LIG3-206ENST00000586058 CSDC2Q9Y534 153 aaKnown RBP4.34□□□□□ -1.71
LIG3-206ENST00000586058 IGLV4-3A0A075B6K6 122 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 CRPP02741 224 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 NMUP48645 174 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 HERVK_113P63121 156 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 DEFA6Q01524 100 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 GAGE6Q13070 117 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 LELP1Q5T871 98 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 ZC2HC1BQ5TFG8 222 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 Q6ZUT4 128 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 VSIG2Q96IQ7 327 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 CST9LQ9H4G1 147 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 UQCR10Q9UDW1 63 aa4.33□□□□□ -1.72
LIG3-206ENST00000586058 hDV102S1A0JD36 115 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 NUPR2A6NF83 97 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
LIG3-206ENST00000586058 SS18Q15532 418 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 SLC25A34Q6PIV7 304 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 ZNF664Q8N3J9 261 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 Q8N976 141 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 PRO1933Q9H354 126 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 Q9UF83 564 aa4.32□□□□□ -1.72
LIG3-206ENST00000586058 VWFP04275 2813 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 TINCRA0A1B0GVN0 87 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 CCL25O15444 150 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 ANGP03950 147 aaKnown RBP4.31□□□□□ -1.72
LIG3-206ENST00000586058 IGLC3P0DOY3 106 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
LIG3-206ENST00000586058 CCL18P55774 89 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 TIRAPP58753 221 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 RNASE13Q5GAN3 156 aaKnown RBP4.31□□□□□ -1.72
LIG3-206ENST00000586058 CDPF1Q6NVV7 123 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 CEMP1Q6PRD7 247 aaPredicted RBP4.31□□□□□ -1.72
LIG3-206ENST00000586058 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 AMELXQ99217 191 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 KLK5Q9Y337 293 aaPredicted RBP4.31□□□□□ -1.72
LIG3-206ENST00000586058 COL6A5A8TX70 2615 aa4.31□□□□□ -1.72
LIG3-206ENST00000586058 TRAV13-1A0A0B4J241 112 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 IGLL5B9A064 214 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 DDTP30046 118 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 NFE4Q86UQ8 179 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 PLEKHB2Q96CS7 222 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 MIEN1Q9BRT3 115 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
LIG3-206ENST00000586058 IGLV4-69A0A075B6H9 119 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 A0A0J9YXV3 536 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 E9PLD3 99 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 COX8AP10176 69 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 UBE2D1P51668 147 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 TCTAP57738 103 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 RBX1P62877 108 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 MPV17L2Q567V2 206 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 SCGB1D4Q6XE38 83 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 STPG4Q8N801 248 aa4.29□□□□□ -1.72
LIG3-206ENST00000586058 OPRPNQ99935 248 aaPredicted RBP4.29□□□□□ -1.72
LIG3-206ENST00000586058 M0R143 59 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms