RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
CACTIN-204ENST00000585942 CSDC2Q9Y534 153 aaKnown RBP13.43□□□□□ -0.26
CACTIN-204ENST00000585942 C2CD3Q4AC94 2353 aa13.43□□□□□ -0.26
CACTIN-204ENST00000585942 A0A0J9YXY3 114 aa13.43□□□□□ -0.26
CACTIN-204ENST00000585942 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
CACTIN-204ENST00000585942 IGHV3-38A0A0C4DH36 116 aa13.42□□□□□ -0.26
CACTIN-204ENST00000585942 FAM236AA0A1B0GUQ0 79 aa13.42□□□□□ -0.26
CACTIN-204ENST00000585942 FAM236BA0A1B0GV22 79 aa13.42□□□□□ -0.26
CACTIN-204ENST00000585942 H7C423 109 aa13.42□□□□□ -0.26
CACTIN-204ENST00000585942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.41□□□□□ -0.26
CACTIN-204ENST00000585942 IGKV2-29A2NJV5 120 aaPredicted RBP13.41□□□□□ -0.26
CACTIN-204ENST00000585942 RNF152Q8N8N0 203 aa13.41□□□□□ -0.26
CACTIN-204ENST00000585942 NBPF19A0A087WUL8 3843 aa13.41□□□□□ -0.26
CACTIN-204ENST00000585942 LOC107984640A0A0U1RRK4 108 aa13.41□□□□□ -0.26
CACTIN-204ENST00000585942 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
CACTIN-204ENST00000585942 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.4□□□□□ -0.26
CACTIN-204ENST00000585942 TRBV7-7A0A0K0K1E9 115 aa13.4□□□□□ -0.26
CACTIN-204ENST00000585942 PRB1P04280 392 aa13.4□□□□□ -0.26
CACTIN-204ENST00000585942 PRSS2P07478 247 aa13.4□□□□□ -0.26
CACTIN-204ENST00000585942 KHDC1LQ5JSQ8 128 aa13.4□□□□□ -0.26
CACTIN-204ENST00000585942 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
CACTIN-204ENST00000585942 M0R2P5 195 aa13.4□□□□□ -0.27
CACTIN-204ENST00000585942 ADAMTSL4-AS1Q5T5F5 129 aa13.4□□□□□ -0.27
CACTIN-204ENST00000585942 J3QLI3 93 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 NPC2P61916 151 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 MRPS36P82909 103 aaKnown RBP13.39□□□□□ -0.27
CACTIN-204ENST00000585942 DNAJC30Q96LL9 226 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 PYGO1Q9Y3Y4 419 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 C9orf153Q5TBE3 101 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 TMEM101Q96IK0 257 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 CHCHD7Q9BUK0 85 aa13.39□□□□□ -0.27
CACTIN-204ENST00000585942 FAM240AA0A1B0GVK7 77 aa13.38□□□□□ -0.27
CACTIN-204ENST00000585942 KRTAP10-9P60411 292 aa13.38□□□□□ -0.27
CACTIN-204ENST00000585942 LITAFQ99732 161 aa13.38□□□□□ -0.27
CACTIN-204ENST00000585942 JMJD1CQ15652 2540 aa13.37□□□□□ -0.27
CACTIN-204ENST00000585942 H3BT86 120 aa13.37□□□□□ -0.27
CACTIN-204ENST00000585942 IGHV4-31P0DP07 118 aa13.37□□□□□ -0.27
CACTIN-204ENST00000585942 LINC00467Q9BRT7 94 aa13.37□□□□□ -0.27
CACTIN-204ENST00000585942 CR1P17927 2039 aa13.37□□□□□ -0.27
CACTIN-204ENST00000585942 Q6ZSV7 163 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 CLEC2BQ92478 149 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 UBE2D4Q9Y2X8 147 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 FSHBP01225 129 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 ICOSQ9Y6W8 199 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 CCDC168Q8NDH2 2452 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 USP24Q9UPU5 2620 aa13.36□□□□□ -0.27
CACTIN-204ENST00000585942 C5orf47Q569G3 176 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 MAP6D1Q9H9H5 199 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 NDUFA7O95182 113 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 NDUFA12Q9UI09 145 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 C11orf72Q8NBR9 251 aa13.35□□□□□ -0.27
CACTIN-204ENST00000585942 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
CACTIN-204ENST00000585942 ZNF415Q09FC8 603 aa13.34□□□□□ -0.27
CACTIN-204ENST00000585942 APCP25054 2843 aa13.34□□□□□ -0.27
CACTIN-204ENST00000585942 A8MTW9 85 aa13.33□□□□□ -0.28
CACTIN-204ENST00000585942 C3orf22Q8N5N4 141 aa13.33□□□□□ -0.28
CACTIN-204ENST00000585942 IGHV3OR16-12A0A075B7B8 117 aa13.33□□□□□ -0.28
CACTIN-204ENST00000585942 HERVK_113P63121 156 aa13.33□□□□□ -0.28
CACTIN-204ENST00000585942 VSIG2Q96IQ7 327 aa13.33□□□□□ -0.28
CACTIN-204ENST00000585942 XCL2Q9UBD3 114 aa13.33□□□□□ -0.28
CACTIN-204ENST00000585942 DAND5Q8N907 189 aa13.32□□□□□ -0.28
CACTIN-204ENST00000585942 UBR5O95071 2799 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-204ENST00000585942 C11orf44Q8N8P7 122 aa13.32□□□□□ -0.28
CACTIN-204ENST00000585942 DYNLRB2Q8TF09 96 aa13.32□□□□□ -0.28
CACTIN-204ENST00000585942 COX6CP09669 75 aa13.31□□□□□ -0.28
CACTIN-204ENST00000585942 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
CACTIN-204ENST00000585942 TINCRA0A1B0GVN0 87 aa13.31□□□□□ -0.28
CACTIN-204ENST00000585942 DEFB121Q5J5C9 76 aa13.31□□□□□ -0.28
CACTIN-204ENST00000585942 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
CACTIN-204ENST00000585942 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
CACTIN-204ENST00000585942 SMIM9A6NGZ8 99 aa13.3□□□□□ -0.28
CACTIN-204ENST00000585942 IGHV3-53P01767 116 aa13.3□□□□□ -0.28
CACTIN-204ENST00000585942 DEFB114Q30KQ6 69 aa13.3□□□□□ -0.28
CACTIN-204ENST00000585942 SETXQ7Z333 2677 aaKnown RBP13.29□□□□□ -0.28
CACTIN-204ENST00000585942 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
CACTIN-204ENST00000585942 FAM19A5Q7Z5A7 132 aaPredicted RBP13.29□□□□□ -0.28
CACTIN-204ENST00000585942 LST1O00453 97 aa13.29□□□□□ -0.28
CACTIN-204ENST00000585942 UQCRQO14949 82 aa13.29□□□□□ -0.28
CACTIN-204ENST00000585942 COX6A2Q02221 97 aa13.28□□□□□ -0.28
CACTIN-204ENST00000585942 C4orf3Q8WVX3 66 aa13.28□□□□□ -0.28
CACTIN-204ENST00000585942 IMUPQ9GZP8 106 aa13.28□□□□□ -0.28
CACTIN-204ENST00000585942 J3KT08 172 aa13.27□□□□□ -0.28
CACTIN-204ENST00000585942 SMCR5Q8TEV8 140 aa13.27□□□□□ -0.29
CACTIN-204ENST00000585942 INSP01308 110 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 MIAQ16674 131 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 Q8N2B8 174 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 A0A1W2PRX2 142 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
CACTIN-204ENST00000585942 A0A0U1RRA0 63 aa13.25□□□□□ -0.29
CACTIN-204ENST00000585942 DGAT2L7PQ6IED9 249 aa13.25□□□□□ -0.29
CACTIN-204ENST00000585942 ZNF625Q96I27 306 aaPredicted RBP13.25□□□□□ -0.29
CACTIN-204ENST00000585942 SPANXDQ9BXN6 97 aa13.25□□□□□ -0.29
CACTIN-204ENST00000585942 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
CACTIN-204ENST00000585942 PIK3CD-AS1Q5SR53 167 aa13.25□□□□□ -0.29
CACTIN-204ENST00000585942 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
CACTIN-204ENST00000585942 BBC3Q96PG8 261 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms