RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 MRPL52Q86TS9 123 aaKnown RBP16.16■□□□□ 0.18
TTC39C-209ENST00000584250 OR5A1Q8NGJ0 315 aa16.16■□□□□ 0.18
TTC39C-209ENST00000584250 KIR2DL4Q99706 377 aa16.16■□□□□ 0.18
TTC39C-209ENST00000584250 TMEM136Q6ZRR5 245 aa16.15■□□□□ 0.18
TTC39C-209ENST00000584250 CHCHD10Q8WYQ3 142 aaPredicted RBP16.15■□□□□ 0.18
TTC39C-209ENST00000584250 BTF3L4Q96K17 158 aa16.15■□□□□ 0.18
TTC39C-209ENST00000584250 PPBPP02775 128 aa16.14■□□□□ 0.17
TTC39C-209ENST00000584250 SMR3BP02814 79 aaPredicted RBP16.14■□□□□ 0.17
TTC39C-209ENST00000584250 ORMDL3Q8N138 153 aa16.14■□□□□ 0.17
TTC39C-209ENST00000584250 TMEM101Q96IK0 257 aa16.14■□□□□ 0.17
TTC39C-209ENST00000584250 PRELID3AQ96N28 172 aa16.14■□□□□ 0.17
TTC39C-209ENST00000584250 CDC42SE2Q9NRR3 84 aa16.14■□□□□ 0.17
TTC39C-209ENST00000584250 TCAPO15273 167 aa16.13■□□□□ 0.17
TTC39C-209ENST00000584250 RNASE13Q5GAN3 156 aaKnown RBP16.13■□□□□ 0.17
TTC39C-209ENST00000584250 Q6ZSA8 131 aa16.13■□□□□ 0.17
TTC39C-209ENST00000584250 UBE2D4Q9Y2X8 147 aa16.13■□□□□ 0.17
TTC39C-209ENST00000584250 RPL39P62891 51 aaKnown RBP16.12■□□□□ 0.17
TTC39C-209ENST00000584250 LINC00959A0A1B0GUT2 108 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 PHOX2AO14813 284 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 APOC3P02656 99 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 NDUFA5Q16718 116 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 ZNF664Q8N3J9 261 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 C15orf56Q8N910 161 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 IMMP2LQ96T52 175 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 CTDSP1Q9GZU7 261 aa16.11■□□□□ 0.17
TTC39C-209ENST00000584250 SLPIP03973 132 aa16.1■□□□□ 0.17
TTC39C-209ENST00000584250 CLRN3Q8NCR9 226 aa16.1■□□□□ 0.17
TTC39C-209ENST00000584250 FOXI1Q12951 378 aa16.09■□□□□ 0.17
TTC39C-209ENST00000584250 FAM104AQ969W3 186 aa16.09■□□□□ 0.17
TTC39C-209ENST00000584250 FAT1Q14517 4588 aa16.09■□□□□ 0.17
TTC39C-209ENST00000584250 LOC389332A0A1B0GUA5 103 aa16.08■□□□□ 0.16
TTC39C-209ENST00000584250 hDV102S1A0JD36 115 aa16.08■□□□□ 0.16
TTC39C-209ENST00000584250 CCL25O15444 150 aa16.08■□□□□ 0.16
TTC39C-209ENST00000584250 XCL1P47992 114 aa16.08■□□□□ 0.16
TTC39C-209ENST00000584250 DGAT2L7PQ6IED9 249 aa16.08■□□□□ 0.16
TTC39C-209ENST00000584250 Q6ZUT4 128 aa16.08■□□□□ 0.16
TTC39C-209ENST00000584250 RHEBQ15382 184 aa16.06■□□□□ 0.16
TTC39C-209ENST00000584250 SVBPQ8N300 66 aa16.06■□□□□ 0.16
TTC39C-209ENST00000584250 OPRPNQ99935 248 aaPredicted RBP16.06■□□□□ 0.16
TTC39C-209ENST00000584250 RPS10P5Q9NQ39 176 aa16.06■□□□□ 0.16
TTC39C-209ENST00000584250 CSDC2Q9Y534 153 aaKnown RBP16.06■□□□□ 0.16
TTC39C-209ENST00000584250 HIGD2BQ4VC39 106 aa16.05■□□□□ 0.16
TTC39C-209ENST00000584250 C9orf163Q8N9P6 203 aa16.05■□□□□ 0.16
TTC39C-209ENST00000584250 PRSS47A8MTI9 375 aa16.04■□□□□ 0.16
TTC39C-209ENST00000584250 SNAPINO95295 136 aa16.04■□□□□ 0.16
TTC39C-209ENST00000584250 KIAA1644Q3SXP7 199 aa16.04■□□□□ 0.16
TTC39C-209ENST00000584250 TIMM21Q9BVV7 248 aa16.04■□□□□ 0.16
TTC39C-209ENST00000584250 SCXQ7RTU7 201 aa16.03■□□□□ 0.16
TTC39C-209ENST00000584250 EPM2AB3EWF7 344 aa16.02■□□□□ 0.16
TTC39C-209ENST00000584250 SS18Q15532 418 aa16.02■□□□□ 0.16
TTC39C-209ENST00000584250 Q5VSD8 79 aa16.02■□□□□ 0.16
TTC39C-209ENST00000584250 MAP1LC3AQ9H492 121 aa16.02■□□□□ 0.16
TTC39C-209ENST00000584250 CNBPP62633 177 aaKnown RBP16.01■□□□□ 0.15
TTC39C-209ENST00000584250 TMEM18Q96B42 140 aa16.01■□□□□ 0.15
TTC39C-209ENST00000584250 LAMTOR2Q9Y2Q5 125 aa16.01■□□□□ 0.15
TTC39C-209ENST00000584250 TRAV9-1A0A075B6T8 112 aa16■□□□□ 0.15
TTC39C-209ENST00000584250 TRAV13-1A0A0B4J241 112 aa16■□□□□ 0.15
TTC39C-209ENST00000584250 PANO1I0J062 215 aa16■□□□□ 0.15
TTC39C-209ENST00000584250 RAB5AP20339 215 aa15.99■□□□□ 0.15
TTC39C-209ENST00000584250 SDIM1Q6ZPB5 146 aa15.99■□□□□ 0.15
TTC39C-209ENST00000584250 LINC00526Q96FQ7 95 aa15.99■□□□□ 0.15
TTC39C-209ENST00000584250 S100PP25815 95 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 SMAGPQ0VAQ4 97 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 CFAP161Q6P656 301 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 CD164L2Q6UWJ8 174 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 Q8N8P6 123 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 CIRBP-AS1Q8TBR5 109 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 CHAC1Q9BUX1 264 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 AP5S1Q9NUS5 200 aa15.98■□□□□ 0.15
TTC39C-209ENST00000584250 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.98■□□□□ 0.15
TTC39C-209ENST00000584250 SPANXA1Q9NS26 97 aa15.97■□□□□ 0.15
TTC39C-209ENST00000584250 GVQW2A0A096LPI5 108 aaPredicted RBP15.96■□□□□ 0.15
TTC39C-209ENST00000584250 C1orf196B1AJZ1 125 aa15.95■□□□□ 0.14
TTC39C-209ENST00000584250 IFI27P40305 119 aaPredicted RBP15.94■□□□□ 0.14
TTC39C-209ENST00000584250 MRPS36P82909 103 aaKnown RBP15.94■□□□□ 0.14
TTC39C-209ENST00000584250 GNB1LQ9BYB4 327 aa15.94■□□□□ 0.14
TTC39C-209ENST00000584250 IGHV1-58A0A0C4DH39 117 aa15.92■□□□□ 0.14
TTC39C-209ENST00000584250 C5orf38Q86SI9 138 aa15.92■□□□□ 0.14
TTC39C-209ENST00000584250 IGLV4-3A0A075B6K6 122 aa15.91■□□□□ 0.14
TTC39C-209ENST00000584250 TGIF2-C20orf24A0A0A6YYL0 155 aa15.91■□□□□ 0.14
TTC39C-209ENST00000584250 CHTF8P0CG12 524 aa15.91■□□□□ 0.14
TTC39C-209ENST00000584250 ZC2HC1BQ5TFG8 222 aa15.91■□□□□ 0.14
TTC39C-209ENST00000584250 LINC00528Q8N1L1 170 aa15.91■□□□□ 0.14
TTC39C-209ENST00000584250 VPS13BQ7Z7G8 4022 aa15.91■□□□□ 0.14
TTC39C-209ENST00000584250 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.9■□□□□ 0.14
TTC39C-209ENST00000584250 C2orf66Q6UXQ4 117 aa15.9■□□□□ 0.14
TTC39C-209ENST00000584250 PYGO1Q9Y3Y4 419 aa15.9■□□□□ 0.14
TTC39C-209ENST00000584250 IGHV3-64A0A075B6Q5 118 aa15.89■□□□□ 0.13
TTC39C-209ENST00000584250 FAM229AH3BQW9 127 aa15.89■□□□□ 0.13
TTC39C-209ENST00000584250 COX7A2LO14548 114 aa15.89■□□□□ 0.13
TTC39C-209ENST00000584250 ALKBH7Q9BT30 221 aaPredicted RBP15.89■□□□□ 0.13
TTC39C-209ENST00000584250 NXT2Q9NPJ8 142 aaKnown RBP15.89■□□□□ 0.13
TTC39C-209ENST00000584250 IFITM10A6NMD0 228 aa15.88■□□□□ 0.13
TTC39C-209ENST00000584250 MRPL18Q9H0U6 180 aaKnown RBP15.88■□□□□ 0.13
TTC39C-209ENST00000584250 CYSLTR1Q9Y271 337 aa15.88■□□□□ 0.13
TTC39C-209ENST00000584250 PRSS3P2Q8NHM4 247 aa15.87■□□□□ 0.13
TTC39C-209ENST00000584250 SRRM2Q9UQ35 2752 aaKnown RBP15.87■□□□□ 0.13
TTC39C-209ENST00000584250 MALP21145 153 aa15.86■□□□□ 0.13
TTC39C-209ENST00000584250 COX6A2Q02221 97 aa15.86■□□□□ 0.13
TTC39C-209ENST00000584250 ORMDL2Q53FV1 153 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms