RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
SS18-224ENST00000584083 PLA2G1BP04054 148 aaKnown RBP13.19□□□□□ -0.3
SS18-224ENST00000584083 MRPL52Q86TS9 123 aaKnown RBP13.19□□□□□ -0.3
SS18-224ENST00000584083 CIRBP-AS1Q8TBR5 109 aa13.19□□□□□ -0.3
SS18-224ENST00000584083 A0A1B0GXF2 115 aa13.18□□□□□ -0.3
SS18-224ENST00000584083 CNBPP62633 177 aaKnown RBP13.18□□□□□ -0.3
SS18-224ENST00000584083 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
SS18-224ENST00000584083 C20orf78Q9BR46 151 aa13.18□□□□□ -0.3
SS18-224ENST00000584083 VPS13BQ7Z7G8 4022 aa13.18□□□□□ -0.3
SS18-224ENST00000584083 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
SS18-224ENST00000584083 LINC00959A0A1B0GUT2 108 aa13.17□□□□□ -0.3
SS18-224ENST00000584083 XCL1P47992 114 aa13.17□□□□□ -0.3
SS18-224ENST00000584083 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
SS18-224ENST00000584083 CLLU1Q5K131 121 aa13.17□□□□□ -0.3
SS18-224ENST00000584083 ZNF664Q8N3J9 261 aa13.17□□□□□ -0.3
SS18-224ENST00000584083 CDC42SE2Q9NRR3 84 aa13.17□□□□□ -0.3
SS18-224ENST00000584083 TRBV24-1A0A075B6N3 115 aa13.16□□□□□ -0.3
SS18-224ENST00000584083 D6R8Y8 96 aa13.16□□□□□ -0.3
SS18-224ENST00000584083 TNFRSF6BO95407 300 aa13.16□□□□□ -0.3
SS18-224ENST00000584083 MT-ND4LP03901 98 aa13.16□□□□□ -0.3
SS18-224ENST00000584083 C15orf56Q8N910 161 aa13.16□□□□□ -0.3
SS18-224ENST00000584083 CCL25O15444 150 aa13.15□□□□□ -0.3
SS18-224ENST00000584083 SS18Q15532 418 aa13.15□□□□□ -0.3
SS18-224ENST00000584083 HIGD2BQ4VC39 106 aa13.15□□□□□ -0.3
SS18-224ENST00000584083 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
SS18-224ENST00000584083 ATP5L2Q7Z4Y8 100 aa13.15□□□□□ -0.3
SS18-224ENST00000584083 IGHV3-64A0A075B6Q5 118 aa13.14□□□□□ -0.31
SS18-224ENST00000584083 SLPIP03973 132 aa13.14□□□□□ -0.31
SS18-224ENST00000584083 FOXI1Q12951 378 aa13.14□□□□□ -0.31
SS18-224ENST00000584083 ANAPC16Q96DE5 110 aa13.14□□□□□ -0.31
SS18-224ENST00000584083 PPBPP02775 128 aa13.13□□□□□ -0.31
SS18-224ENST00000584083 RPL32P62910 135 aaKnown RBP13.13□□□□□ -0.31
SS18-224ENST00000584083 TMEM18Q96B42 140 aa13.13□□□□□ -0.31
SS18-224ENST00000584083 FLG2Q5D862 2391 aaPredicted RBP13.12□□□□□ -0.31
SS18-224ENST00000584083 TCAPO15273 167 aa13.12□□□□□ -0.31
SS18-224ENST00000584083 NPYP01303 97 aa13.12□□□□□ -0.31
SS18-224ENST00000584083 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
SS18-224ENST00000584083 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
SS18-224ENST00000584083 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
SS18-224ENST00000584083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.12□□□□□ -0.31
SS18-224ENST00000584083 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
SS18-224ENST00000584083 PHOX2AO14813 284 aa13.1□□□□□ -0.31
SS18-224ENST00000584083 RNASE13Q5GAN3 156 aaKnown RBP13.1□□□□□ -0.31
SS18-224ENST00000584083 TMEM136Q6ZRR5 245 aa13.1□□□□□ -0.31
SS18-224ENST00000584083 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
SS18-224ENST00000584083 GVQW2A0A096LPI5 108 aaPredicted RBP13.09□□□□□ -0.31
SS18-224ENST00000584083 PANO1I0J062 215 aa13.09□□□□□ -0.31
SS18-224ENST00000584083 IFITM2Q01629 132 aa13.09□□□□□ -0.31
SS18-224ENST00000584083 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
SS18-224ENST00000584083 PRELID3AQ96N28 172 aa13.09□□□□□ -0.31
SS18-224ENST00000584083 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
SS18-224ENST00000584083 IGHV1-58A0A0C4DH39 117 aa13.08□□□□□ -0.32
SS18-224ENST00000584083 C1orf196B1AJZ1 125 aa13.08□□□□□ -0.32
SS18-224ENST00000584083 RPL39P62891 51 aaKnown RBP13.07□□□□□ -0.32
SS18-224ENST00000584083 Q6ZUT4 128 aa13.07□□□□□ -0.32
SS18-224ENST00000584083 TRAV13-1A0A0B4J241 112 aa13.06□□□□□ -0.32
SS18-224ENST00000584083 UQCC3Q6UW78 93 aa13.06□□□□□ -0.32
SS18-224ENST00000584083 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
SS18-224ENST00000584083 RAB5AP20339 215 aa13.05□□□□□ -0.32
SS18-224ENST00000584083 LINC00526Q96FQ7 95 aa13.05□□□□□ -0.32
SS18-224ENST00000584083 TMEM218A2RU14 115 aa13.04□□□□□ -0.32
SS18-224ENST00000584083 MALP21145 153 aa13.04□□□□□ -0.32
SS18-224ENST00000584083 COX6A2Q02221 97 aa13.04□□□□□ -0.32
SS18-224ENST00000584083 LOC389332A0A1B0GUA5 103 aa13.03□□□□□ -0.32
SS18-224ENST00000584083 COX7A2LO14548 114 aa13.03□□□□□ -0.32
SS18-224ENST00000584083 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
SS18-224ENST00000584083 SPANXA1Q9NS26 97 aa13.03□□□□□ -0.32
SS18-224ENST00000584083 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
SS18-224ENST00000584083 ADCYAP1P18509 176 aa13.02□□□□□ -0.33
SS18-224ENST00000584083 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
SS18-224ENST00000584083 PRSS3P2Q8NHM4 247 aa13.02□□□□□ -0.33
SS18-224ENST00000584083 MAP1LC3AQ9H492 121 aa13.02□□□□□ -0.33
SS18-224ENST00000584083 LAMTOR2Q9Y2Q5 125 aa13.02□□□□□ -0.33
SS18-224ENST00000584083 SPACA4Q8TDM5 124 aa13.01□□□□□ -0.33
SS18-224ENST00000584083 OPRPNQ99935 248 aaPredicted RBP13.01□□□□□ -0.33
SS18-224ENST00000584083 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
SS18-224ENST00000584083 A0A087WYN8 130 aa13□□□□□ -0.33
SS18-224ENST00000584083 KRTAP10-4P60372 401 aaPredicted RBP13□□□□□ -0.33
SS18-224ENST00000584083 CARD19Q96LW7 228 aa13□□□□□ -0.33
SS18-224ENST00000584083 IMMP2LQ96T52 175 aa13□□□□□ -0.33
SS18-224ENST00000584083 CTDSP1Q9GZU7 261 aa13□□□□□ -0.33
SS18-224ENST00000584083 IGKV2-24A0A0C4DH68 120 aa12.99□□□□□ -0.33
SS18-224ENST00000584083 MRPS36P82909 103 aaKnown RBP12.99□□□□□ -0.33
SS18-224ENST00000584083 C5orf38Q86SI9 138 aa12.99□□□□□ -0.33
SS18-224ENST00000584083 PRSS47A8MTI9 375 aa12.98□□□□□ -0.33
SS18-224ENST00000584083 SYCNQ0VAF6 134 aa12.98□□□□□ -0.33
SS18-224ENST00000584083 MAJINQ3KP22 176 aa12.98□□□□□ -0.33
SS18-224ENST00000584083 COMMD7Q86VX2 200 aa12.98□□□□□ -0.33
SS18-224ENST00000584083 IFITM10A6NMD0 228 aa12.97□□□□□ -0.33
SS18-224ENST00000584083 IFI27P40305 119 aaPredicted RBP12.97□□□□□ -0.33
SS18-224ENST00000584083 FAM104AQ969W3 186 aa12.97□□□□□ -0.33
SS18-224ENST00000584083 SEC11CQ9BY50 192 aa12.97□□□□□ -0.33
SS18-224ENST00000584083 PKIGQ9Y2B9 76 aa12.97□□□□□ -0.33
SS18-224ENST00000584083 IGLV4-69A0A075B6H9 119 aa12.96□□□□□ -0.33
SS18-224ENST00000584083 J3QL48 77 aa12.96□□□□□ -0.33
SS18-224ENST00000584083 APOMO95445 188 aa12.96□□□□□ -0.33
SS18-224ENST00000584083 Q8N8P6 123 aa12.96□□□□□ -0.33
SS18-224ENST00000584083 MYCBP2O75592 4640 aa12.96□□□□□ -0.33
SS18-224ENST00000584083 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
SS18-224ENST00000584083 A0A096LNI7 61 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms