RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	NUP35	Q8NFH5	326 aa		4.42	□□□□□ -1.7
NCOR1-223	ENST00000583226	IGLV4-69	A0A075B6H9	119 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	IGLV9-49	A0A0B4J1Y8	123 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	KRTAP16-1	A8MUX0	517 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	STAG3L2	P0CL84	134 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	STAG3L3	P0CL85	134 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	GCHFR	P30047	84 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	BTC	P35070	178 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	XCL1	P47992	114 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	GAGE2E	Q4V326	116 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	EIF5AL1	Q6IS14	154 aa	Known RBP	4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	GAGE2A	Q6NT46	116 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	LINC00173	Q6ZV60	143 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	TYMSOS	Q8TAI1	123 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	GAGE2D	Q9UEU5	116 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	ZFP30	Q9Y2G7	519 aa		4.41	□□□□□ -1.7
NCOR1-223	ENST00000583226	SNAI2	O43623	268 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	OR5AL1	P0C617	328 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	SMIM17	P0DL12	118 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	CTAG1A	P78358	180 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	MT1H	P80294	61 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	RPL18A	Q02543	176 aa	Known RBP	4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	COTL1	Q14019	142 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	SCGB1C1	Q8TD33	95 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226	PPDPF	Q9H3Y8	114 aa		4.4	□□□□□ -1.71
NCOR1-223	ENST00000583226		A0A1W2PRE2	83 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	CCL25	O15444	150 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	ZNF861P	O60384	105 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	CXCL1	P09341	107 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	NKX2-5	P52952	324 aa	Predicted RBP	4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	SPANXN1	Q5VSR9	72 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	AMMECR1L	Q6DCA0	310 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	OR5A1	Q8NGJ0	315 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	AP1S3	Q96PC3	154 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	TMEM167B	Q9NRX6	74 aa		4.39	□□□□□ -1.71
NCOR1-223	ENST00000583226	LINC00959	A0A1B0GUT2	108 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	FAM168B	A1KXE4	195 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	CENPX	A8MT69	81 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	PEX7	O00628	323 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	ESD	P10768	282 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	CDC34	P49427	236 aa	Predicted RBP	4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	RASL11A	Q6T310	242 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	CD164L2	Q6UWJ8	174 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	C2orf48	Q96LS8	159 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	CAMK2N2	Q96S95	79 aa		4.38	□□□□□ -1.71
NCOR1-223	ENST00000583226	MUC21	A0A140T8X8	626 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	C19orf71	A6NCJ1	209 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	BCL2L11	O43521	198 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	CXorf1	O96002	111 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	KRTAP19-2	Q3LHN2	52 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	TRIQK	Q629K1	86 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	RNASEK	Q6P5S7	137 aa	Known RBP	4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	LINC00337	Q8N6G1	96 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	LINC00304	Q8N9R0	145 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	HIST1H2BA	Q96A08	127 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	SEC22C	Q9BRL7	303 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	NIT2	Q9NQR4	276 aa		4.37	□□□□□ -1.71
NCOR1-223	ENST00000583226	LTA	P01374	205 aa		4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	MGP	P08493	103 aa		4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	ZNF25	P17030	456 aa	Predicted RBP	4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	DSCR10	P59022	87 aa		4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	UBE2B	P63146	152 aa		4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	FMC1	Q96HJ9	113 aa		4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	NKX6-2	Q9C056	277 aa	Predicted RBP	4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226	HSPB11	Q9Y547	144 aa		4.36	□□□□□ -1.71
NCOR1-223	ENST00000583226		M0QXV9	152 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	NTF3	P20783	257 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	S100A5	P33763	92 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	SST	P61278	116 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	SS18	Q15532	418 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	KRTAP13-3	Q3SY46	172 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	KRTAP13-2	Q52LG2	175 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	IMMP2L	Q96T52	175 aa		4.35	□□□□□ -1.71
NCOR1-223	ENST00000583226	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	COX7A2L	O14548	114 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	NCR2	O95944	276 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	DEFA3	P59666	94 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	UBE2G1	P62253	170 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	LRRC37A5P	Q49AS3	106 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	FP248	Q71RG6	208 aa	Predicted RBP	4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	SMIM3	Q9BZL3	60 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	WFDC1	Q9HC57	220 aa		4.34	□□□□□ -1.71
NCOR1-223	ENST00000583226	SCGB1D1	O95968	90 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	TLX1NB	P0CAT3	122 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	LINC00242	Q5T6M2	205 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	TMEM101	Q96IK0	257 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	BTF3L4	Q96K17	158 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	RPS10P5	Q9NQ39	176 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	NUDT15	Q9NV35	164 aa		4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	MRPL35	Q9NZE8	188 aa	Known RBP	4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.33	□□□□□ -1.72
NCOR1-223	ENST00000583226	SSPO	A2VEC9	5147 aa		4.32	□□□□□ -1.72
NCOR1-223	ENST00000583226	FAM74A7	A6NL05	159 aa		4.32	□□□□□ -1.72
NCOR1-223	ENST00000583226		F8WDY8	70 aa		4.32	□□□□□ -1.72
NCOR1-223	ENST00000583226		G3V3Q6	166 aa		4.32	□□□□□ -1.72
NCOR1-223	ENST00000583226	NUPR1	O60356	82 aa		4.32	□□□□□ -1.72
NCOR1-223	ENST00000583226	SIX6	O95475	246 aa		4.32	□□□□□ -1.72
NCOR1-223	ENST00000583226	MB	P02144	154 aa		4.32	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms