RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 COX11Q9Y6N1 276 aa4.96□□□□□ -1.62
CCDC47-205ENST00000582331 TRGV11A0A075B6L2 103 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 TRBV7-9A0A0J9YWB2 115 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 GATA1P15976 413 aaPredicted RBP4.95□□□□□ -1.62
CCDC47-205ENST00000582331 PMCHP20382 165 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 AMTP48728 403 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 FAM19A2Q8N3H0 131 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 ZNF664Q8N3J9 261 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 PRADC1Q9BSG0 188 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 TPPP3Q9BW30 176 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 SAMD10Q9BYL1 202 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 NAGKQ9UJ70 344 aa4.95□□□□□ -1.62
CCDC47-205ENST00000582331 MUC21A0A0G2JKD1 596 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 MUC21A0A140T8X8 626 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 M0R2P5 195 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 SCGB1D1O95968 90 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 PKIAP61925 76 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 MRPL51Q4U2R6 128 aaKnown RBP4.94□□□□□ -1.62
CCDC47-205ENST00000582331 DAZ4Q86SG3 579 aaKnown RBP4.94□□□□□ -1.62
CCDC47-205ENST00000582331 AMN1Q8IY45 258 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 SLC25A29Q8N8R3 303 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 CHCHD1Q96BP2 118 aaKnown RBP4.94□□□□□ -1.62
CCDC47-205ENST00000582331 RMI2Q96E14 147 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 RNF185Q96GF1 192 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 GTSF1LQ9H1H1 148 aa4.94□□□□□ -1.62
CCDC47-205ENST00000582331 DAZ3Q9NR90 486 aaKnown RBP4.94□□□□□ -1.62
CCDC47-205ENST00000582331 SNAI2O43623 268 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 HSBP1O75506 76 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 OR5AL1P0C617 328 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 LINC00614P0C842 121 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 C3orf79P0CE67 100 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 NTF3P20783 257 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 RHOHQ15669 191 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 RNASEKQ6P5S7 137 aaKnown RBP4.93□□□□□ -1.62
CCDC47-205ENST00000582331 TEX43Q6ZNM6 134 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 TMEM191AQ9H0A3 160 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 PRO1933Q9H354 126 aa4.93□□□□□ -1.62
CCDC47-205ENST00000582331 IGKV2D-24A0A075B6R9 120 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 TRAV21A0A0B4J279 112 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 TRBV6-4A0A1B0GX49 114 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 GNRH2O43555 120 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 CIDEAO60543 219 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 RAB4AP20338 218 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 KRTDAPP60985 99 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 SSTP61278 116 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 TWIST1Q15672 202 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 OR10AG1Q8NH19 301 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 PRELID3AQ96N28 172 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 DPH3P1Q9H4G8 78 aa4.92□□□□□ -1.62
CCDC47-205ENST00000582331 IGHV1-24A0A0C4DH33 117 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 D6R8Y8 96 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 SMKR1H3BMG3 65 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 GAS8-AS1O95177 125 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 NPYP01303 97 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 CACNG7P62955 275 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 C14orf177Q52M58 125 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 LINC00173Q6ZV60 143 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 ORMDL3Q8N138 153 aa4.91□□□□□ -1.62
CCDC47-205ENST00000582331 A0A096LNJ9 63 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 IGHV3-73A0A0B4J1V6 119 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 PPBPP02775 128 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 DDTP30046 118 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 CKS2P33552 79 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.63
CCDC47-205ENST00000582331 CTAG1AP78358 180 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 PMCHL1Q16048 86 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 CFAP126Q5VTH2 177 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 DNAJC30Q96LL9 226 aa4.9□□□□□ -1.63
CCDC47-205ENST00000582331 PRSS47A8MTI9 375 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 H3BVH4 76 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 LEPROTL1O95214 131 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 NCR2O95944 276 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 RNASE3P12724 160 aaKnown RBP4.89□□□□□ -1.63
CCDC47-205ENST00000582331 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 FA2HQ7L5A8 372 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 PRSS3P2Q8NHM4 247 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 UBE2WQ96B02 151 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 KLK12Q9UKR0 248 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 LAMTOR2Q9Y2Q5 125 aa4.89□□□□□ -1.63
CCDC47-205ENST00000582331 LOC389332A0A1B0GUA5 103 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 SYS1-DBNDD2H3BUS1 97 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 TNFRSF6BO95407 300 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 GAGE1Q13065 139 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 GAGE4Q13068 117 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 GAGE5Q13069 117 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 GAGE13Q4V321 117 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 PET117Q6UWS5 81 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 NRACQ8N912 160 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
CCDC47-205ENST00000582331 S100A4P26447 101 aaKnown RBP4.87□□□□□ -1.63
CCDC47-205ENST00000582331 SPANXN1Q5VSR9 72 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 SMIM15Q7Z3B0 74 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms