RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 K7EN84 100 aa9.1□□□□□ -0.95
CDC42EP4-208ENST00000582303 GATCO43716 136 aaKnown RBP9.1□□□□□ -0.95
CDC42EP4-208ENST00000582303 SYCNQ0VAF6 134 aa9.1□□□□□ -0.95
CDC42EP4-208ENST00000582303 CT83Q5H943 113 aa9.1□□□□□ -0.95
CDC42EP4-208ENST00000582303 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
CDC42EP4-208ENST00000582303 TMEM250H0YL14 139 aa9.09□□□□□ -0.95
CDC42EP4-208ENST00000582303 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
CDC42EP4-208ENST00000582303 MRPL52Q86TS9 123 aaKnown RBP9.09□□□□□ -0.95
CDC42EP4-208ENST00000582303 ESDP10768 282 aa9.08□□□□□ -0.96
CDC42EP4-208ENST00000582303 MALP21145 153 aa9.08□□□□□ -0.96
CDC42EP4-208ENST00000582303 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
CDC42EP4-208ENST00000582303 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
CDC42EP4-208ENST00000582303 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
CDC42EP4-208ENST00000582303 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 C7orf77A4D0Y5 90 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 C1orf196B1AJZ1 125 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 PPP1R17O96001 155 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 CAMPP49913 170 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 RNF213Q63HN8 5207 aa9.07□□□□□ -0.96
CDC42EP4-208ENST00000582303 TRBV27A0A0K0K1C4 114 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 A0A1B0GUT8 65 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 TSHBP01222 138 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 FCER1GP30273 86 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 TMEM191AQ9H0A3 160 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 TMEM242Q9NWH2 141 aa9.06□□□□□ -0.96
CDC42EP4-208ENST00000582303 IGLV4-69A0A075B6H9 119 aa9.05□□□□□ -0.96
CDC42EP4-208ENST00000582303 COX7A2LO14548 114 aa9.05□□□□□ -0.96
CDC42EP4-208ENST00000582303 KRTAP10-8P60410 259 aa9.05□□□□□ -0.96
CDC42EP4-208ENST00000582303 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
CDC42EP4-208ENST00000582303 SRSF9Q13242 221 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDC42EP4-208ENST00000582303 TCTE3Q8IZS6 198 aa9.05□□□□□ -0.96
CDC42EP4-208ENST00000582303 VCYO14598 125 aa9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 APOMO95445 188 aa9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 POLR2KP53803 58 aaKnown RBP9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 KIR2DL4Q99706 377 aa9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
CDC42EP4-208ENST00000582303 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
CDC42EP4-208ENST00000582303 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
CDC42EP4-208ENST00000582303 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
CDC42EP4-208ENST00000582303 CAMK2N2Q96S95 79 aa9.03□□□□□ -0.96
CDC42EP4-208ENST00000582303 CEBPGP53567 150 aa9.02□□□□□ -0.97
CDC42EP4-208ENST00000582303 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
CDC42EP4-208ENST00000582303 PPP1R2P9O14990 202 aa9.01□□□□□ -0.97
CDC42EP4-208ENST00000582303 MT-ND6P03923 174 aa9.01□□□□□ -0.97
CDC42EP4-208ENST00000582303 RAB4AP20338 218 aa9.01□□□□□ -0.97
CDC42EP4-208ENST00000582303 TCAPO15273 167 aa9□□□□□ -0.97
CDC42EP4-208ENST00000582303 RIGQ13278 110 aa9□□□□□ -0.97
CDC42EP4-208ENST00000582303 NUP35Q8NFH5 326 aa9□□□□□ -0.97
CDC42EP4-208ENST00000582303 SMIM7Q9BQ49 75 aa9□□□□□ -0.97
CDC42EP4-208ENST00000582303 F8WDY8 70 aa8.99□□□□□ -0.97
CDC42EP4-208ENST00000582303 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
CDC42EP4-208ENST00000582303 RNF151Q2KHN1 245 aa8.99□□□□□ -0.97
CDC42EP4-208ENST00000582303 AMN1Q8IY45 258 aa8.99□□□□□ -0.97
CDC42EP4-208ENST00000582303 EIF5A2Q9GZV4 153 aaKnown RBP8.99□□□□□ -0.97
CDC42EP4-208ENST00000582303 OSTCQ9NRP0 149 aa8.99□□□□□ -0.97
CDC42EP4-208ENST00000582303 TRAV13-1A0A0B4J241 112 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 GAS8-AS1O95177 125 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 RPL18AQ02543 176 aaKnown RBP8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 ODF1Q14990 250 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 LINC01551Q86U37 167 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 OR10D4PQ8NGN7 298 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 TIMM21Q9BVV7 248 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 UBE2D4Q9Y2X8 147 aa8.98□□□□□ -0.97
CDC42EP4-208ENST00000582303 IMMP2LQ96T52 175 aa8.97□□□□□ -0.97
CDC42EP4-208ENST00000582303 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
CDC42EP4-208ENST00000582303 A0A1W2PNN7 141 aa8.96□□□□□ -0.98
CDC42EP4-208ENST00000582303 ZNF727A8MUV8 499 aa8.96□□□□□ -0.98
CDC42EP4-208ENST00000582303 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.96□□□□□ -0.98
CDC42EP4-208ENST00000582303 SPAG11BQ08648 103 aa8.96□□□□□ -0.98
CDC42EP4-208ENST00000582303 C1orf137Q5JT78 98 aa8.96□□□□□ -0.98
CDC42EP4-208ENST00000582303 ALKAL2Q6UX46 152 aa8.96□□□□□ -0.98
CDC42EP4-208ENST00000582303 LINC00862A6NCI5 91 aa8.95□□□□□ -0.98
CDC42EP4-208ENST00000582303 C5orf38Q86SI9 138 aa8.95□□□□□ -0.98
CDC42EP4-208ENST00000582303 DIRC1Q969H9 104 aa8.95□□□□□ -0.98
CDC42EP4-208ENST00000582303 C20orf78Q9BR46 151 aa8.95□□□□□ -0.98
CDC42EP4-208ENST00000582303 NAT8BQ9UHF3 227 aa8.95□□□□□ -0.98
CDC42EP4-208ENST00000582303 A0A1B0GW15 77 aa8.94□□□□□ -0.98
CDC42EP4-208ENST00000582303 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
CDC42EP4-208ENST00000582303 SMKR1H3BMG3 65 aa8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 NDUFA1O15239 70 aa8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 TMEM241Q24JQ0 296 aa8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 FAM74A3Q4VXF1 159 aa8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 NRACQ8N912 160 aa8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
CDC42EP4-208ENST00000582303 RPL32P62910 135 aaKnown RBP8.92□□□□□ -0.98
CDC42EP4-208ENST00000582303 FAM104BQ5XKR9 115 aa8.92□□□□□ -0.98
CDC42EP4-208ENST00000582303 Q6ZUT4 128 aa8.92□□□□□ -0.98
CDC42EP4-208ENST00000582303 V9GYV3 84 aa8.92□□□□□ -0.98
CDC42EP4-208ENST00000582303 TRBV24-1A0A075B6N3 115 aa8.91□□□□□ -0.98
CDC42EP4-208ENST00000582303 S100A8P05109 93 aa8.91□□□□□ -0.98
CDC42EP4-208ENST00000582303 CKS2P33552 79 aa8.91□□□□□ -0.98
CDC42EP4-208ENST00000582303 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
CDC42EP4-208ENST00000582303 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
CDC42EP4-208ENST00000582303 ORAOV1Q8WV07 137 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms