RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 GTSF1LQ9H1H1 148 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 RETNQ9HD89 108 aa10.29□□□□□ -0.76
MKS1-211ENST00000581761 GYPEP15421 78 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 HERVK_113P61574 105 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 SMAGPQ0VAQ4 97 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
MKS1-211ENST00000581761 DGAT2L7PQ6IED9 249 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 C2orf91Q6ZV80 131 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
MKS1-211ENST00000581761 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
MKS1-211ENST00000581761 UBE2L6O14933 153 aa10.27□□□□□ -0.77
MKS1-211ENST00000581761 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
MKS1-211ENST00000581761 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
MKS1-211ENST00000581761 LBHQ53QV2 105 aaPredicted RBP10.27□□□□□ -0.77
MKS1-211ENST00000581761 DEFB121Q5J5C9 76 aa10.27□□□□□ -0.77
MKS1-211ENST00000581761 TMEM170BQ5T4T1 132 aa10.27□□□□□ -0.77
MKS1-211ENST00000581761 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.77
MKS1-211ENST00000581761 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 E9PLD3 99 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 SIVA1O15304 175 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 PAX4O43316 350 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 ATP5G1P05496 136 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
MKS1-211ENST00000581761 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
MKS1-211ENST00000581761 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
MKS1-211ENST00000581761 H7C423 109 aa10.24□□□□□ -0.77
MKS1-211ENST00000581761 ZNF22P17026 224 aaPredicted RBP10.24□□□□□ -0.77
MKS1-211ENST00000581761 GAGE6Q13070 117 aa10.24□□□□□ -0.77
MKS1-211ENST00000581761 OR5A1Q8NGJ0 315 aa10.24□□□□□ -0.77
MKS1-211ENST00000581761 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
MKS1-211ENST00000581761 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
MKS1-211ENST00000581761 A0A0J9YY99 117 aa10.23□□□□□ -0.77
MKS1-211ENST00000581761 F5H768 121 aa10.23□□□□□ -0.77
MKS1-211ENST00000581761 HTN3P15516 51 aa10.23□□□□□ -0.77
MKS1-211ENST00000581761 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
MKS1-211ENST00000581761 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
MKS1-211ENST00000581761 MPV17L2Q567V2 206 aa10.22□□□□□ -0.77
MKS1-211ENST00000581761 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
MKS1-211ENST00000581761 HIGD1BQ9P298 99 aa10.22□□□□□ -0.77
MKS1-211ENST00000581761 CSDC2Q9Y534 153 aaKnown RBP10.22□□□□□ -0.77
MKS1-211ENST00000581761 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.77
MKS1-211ENST00000581761 TMEM223A0PJW6 202 aa10.21□□□□□ -0.77
MKS1-211ENST00000581761 UBE2D1P51668 147 aa10.21□□□□□ -0.77
MKS1-211ENST00000581761 COL5A1-AS1Q5SY13 56 aa10.21□□□□□ -0.77
MKS1-211ENST00000581761 BVES-AS1Q5T3Y7 98 aa10.21□□□□□ -0.77
MKS1-211ENST00000581761 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.77
MKS1-211ENST00000581761 DNAH9Q9NYC9 4486 aa10.21□□□□□ -0.78
MKS1-211ENST00000581761 TRAV26-1A0A087WT03 109 aa10.2□□□□□ -0.78
MKS1-211ENST00000581761 A0A096LPF7 62 aa10.2□□□□□ -0.78
MKS1-211ENST00000581761 HSD52Q0P140 79 aa10.2□□□□□ -0.78
MKS1-211ENST00000581761 C12orf74Q32Q52 190 aa10.2□□□□□ -0.78
MKS1-211ENST00000581761 C11orf68Q9H3H3 251 aaKnown RBP10.2□□□□□ -0.78
MKS1-211ENST00000581761 GEMIN7Q9H840 131 aaKnown RBP10.2□□□□□ -0.78
MKS1-211ENST00000581761 CDC42SE2Q9NRR3 84 aa10.2□□□□□ -0.78
MKS1-211ENST00000581761 LEPROTO15243 131 aa10.19□□□□□ -0.78
MKS1-211ENST00000581761 ZNF25P17030 456 aaPredicted RBP10.19□□□□□ -0.78
MKS1-211ENST00000581761 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
MKS1-211ENST00000581761 A0A1B0GV90 55 aa10.18□□□□□ -0.78
MKS1-211ENST00000581761 ZNF815PA8K554 130 aa10.18□□□□□ -0.78
MKS1-211ENST00000581761 LGALS3P17931 250 aaKnown RBP10.18□□□□□ -0.78
MKS1-211ENST00000581761 TIRAPP58753 221 aa10.18□□□□□ -0.78
MKS1-211ENST00000581761 LINC00469Q8N7U9 141 aa10.18□□□□□ -0.78
MKS1-211ENST00000581761 PLEKHB2Q96CS7 222 aa10.18□□□□□ -0.78
MKS1-211ENST00000581761 IGHV3-64A0A075B6Q5 118 aa10.17□□□□□ -0.78
MKS1-211ENST00000581761 J3QQQ9 107 aa10.17□□□□□ -0.78
MKS1-211ENST00000581761 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
MKS1-211ENST00000581761 ICOSQ9Y6W8 199 aa10.17□□□□□ -0.78
MKS1-211ENST00000581761 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
MKS1-211ENST00000581761 A0A0J9YWU9 116 aa10.16□□□□□ -0.78
MKS1-211ENST00000581761 H3BRM9 83 aa10.16□□□□□ -0.78
MKS1-211ENST00000581761 HERVK_113P63121 156 aa10.16□□□□□ -0.78
MKS1-211ENST00000581761 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
MKS1-211ENST00000581761 B9D2Q9BPU9 175 aa10.16□□□□□ -0.78
MKS1-211ENST00000581761 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
MKS1-211ENST00000581761 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
MKS1-211ENST00000581761 SPINK8P0C7L1 97 aa10.15□□□□□ -0.78
MKS1-211ENST00000581761 SEC11AP67812 179 aa10.15□□□□□ -0.78
MKS1-211ENST00000581761 LINC00242Q5T6M2 205 aa10.15□□□□□ -0.78
MKS1-211ENST00000581761 FAM19A3Q7Z5A8 133 aa10.15□□□□□ -0.78
MKS1-211ENST00000581761 ORAOV1Q8WV07 137 aa10.15□□□□□ -0.78
MKS1-211ENST00000581761 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
MKS1-211ENST00000581761 IGLV5-45A0A087WSX0 123 aa10.14□□□□□ -0.79
MKS1-211ENST00000581761 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
MKS1-211ENST00000581761 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
MKS1-211ENST00000581761 SH2D6Q7Z4S9 175 aa10.14□□□□□ -0.79
MKS1-211ENST00000581761 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
MKS1-211ENST00000581761 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
MKS1-211ENST00000581761 GCSHP23434 173 aa10.13□□□□□ -0.79
MKS1-211ENST00000581761 COX6A2Q02221 97 aa10.13□□□□□ -0.79
MKS1-211ENST00000581761 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
MKS1-211ENST00000581761 NBEAL2Q6ZNJ1 2754 aa10.12□□□□□ -0.79
MKS1-211ENST00000581761 IGHV3-30-3P0DP02 117 aa10.12□□□□□ -0.79
MKS1-211ENST00000581761 RBX1P62877 108 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms