RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ESDP10768 282 aa7.36□□□□□ -1.23
CSNK1D-218ENST00000581655 RNF151Q2KHN1 245 aa7.36□□□□□ -1.23
CSNK1D-218ENST00000581655 TMUB2Q71RG4 321 aa7.36□□□□□ -1.23
CSNK1D-218ENST00000581655 M0QXV9 152 aa7.35□□□□□ -1.23
CSNK1D-218ENST00000581655 PFDN1O60925 122 aa7.35□□□□□ -1.23
CSNK1D-218ENST00000581655 SRSF3P84103 164 aaKnown RBP7.35□□□□□ -1.23
CSNK1D-218ENST00000581655 SPAG11BQ08648 103 aa7.35□□□□□ -1.23
CSNK1D-218ENST00000581655 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
CSNK1D-218ENST00000581655 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
CSNK1D-218ENST00000581655 C1orf196B1AJZ1 125 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 G3V3Q6 166 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 ZNF861PO60384 105 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 UPK1BO75841 260 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 PMCHP20382 165 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 RPL35P42766 123 aaKnown RBP7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 IFITM3Q01628 133 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 MRAP2Q96G30 205 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
CSNK1D-218ENST00000581655 A0A1B0GV50 99 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 XKRY2A2RUG3 117 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 I3L3M4 83 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 IFNA1P01562 189 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 TWIST1Q15672 202 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 Q5BKY6 102 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 NDUFA13Q9P0J0 144 aa7.33□□□□□ -1.24
CSNK1D-218ENST00000581655 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
CSNK1D-218ENST00000581655 GAGE2EQ4V326 116 aa7.32□□□□□ -1.24
CSNK1D-218ENST00000581655 TMEM242Q9NWH2 141 aa7.32□□□□□ -1.24
CSNK1D-218ENST00000581655 GAGE2DQ9UEU5 116 aa7.32□□□□□ -1.24
CSNK1D-218ENST00000581655 TSHBP01222 138 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 TLX1NBP0CAT3 122 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 CTRLP40313 264 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 CENPWQ5EE01 88 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 C9orf62Q8N4C0 152 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 SFT2D1Q8WV19 159 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 ALG5Q9Y673 324 aa7.31□□□□□ -1.24
CSNK1D-218ENST00000581655 TRAV13-1A0A0B4J241 112 aa7.3□□□□□ -1.24
CSNK1D-218ENST00000581655 CRYGAP11844 174 aa7.3□□□□□ -1.24
CSNK1D-218ENST00000581655 RNASE13Q5GAN3 156 aaKnown RBP7.3□□□□□ -1.24
CSNK1D-218ENST00000581655 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
CSNK1D-218ENST00000581655 S100ZQ8WXG8 99 aa7.3□□□□□ -1.24
CSNK1D-218ENST00000581655 NDUFA1O15239 70 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 LINC00173Q6ZV60 143 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 KCNRGQ8N5I3 272 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 OR10D4PQ8NGN7 298 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 ORAOV1Q8WV07 137 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 SMDT1Q9H4I9 107 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
CSNK1D-218ENST00000581655 FXYD6-FXYD2A0A087WZ82 144 aa7.28□□□□□ -1.24
CSNK1D-218ENST00000581655 C7orf77A4D0Y5 90 aa7.28□□□□□ -1.24
CSNK1D-218ENST00000581655 TEX261Q6UWH6 196 aa7.28□□□□□ -1.24
CSNK1D-218ENST00000581655 UNQ6190/PRO20217Q6UXQ8 127 aa7.28□□□□□ -1.24
CSNK1D-218ENST00000581655 RNASE7Q9H1E1 156 aaKnown RBP7.28□□□□□ -1.24
CSNK1D-218ENST00000581655 TRBV6-5A0A0K0K1A5 114 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 F8WDY8 70 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 TMEM241Q24JQ0 296 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 LINC00299Q6ZSB3 139 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 SMIM15Q7Z3B0 74 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 FAM213BQ8TBF2 198 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 MBD3L1Q8WWY6 194 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
CSNK1D-218ENST00000581655 RAB19A4D1S5 217 aa7.26□□□□□ -1.25
CSNK1D-218ENST00000581655 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
CSNK1D-218ENST00000581655 ST20Q9HBF5 79 aa7.26□□□□□ -1.25
CSNK1D-218ENST00000581655 NUPR1O60356 82 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 FAM210AQ96ND0 272 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 CTDSP1Q9GZU7 261 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 CYTL1Q9NRR1 136 aa7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 CSDC2Q9Y534 153 aaKnown RBP7.25□□□□□ -1.25
CSNK1D-218ENST00000581655 GNG4P50150 75 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 CCL20P78556 96 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 Q6ZUT4 128 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 NUDT10Q8NFP7 164 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 SMIM12Q96EX1 92 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 UBE2D4Q9Y2X8 147 aa7.24□□□□□ -1.25
CSNK1D-218ENST00000581655 GIPP09681 153 aaPredicted RBP7.23□□□□□ -1.25
CSNK1D-218ENST00000581655 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
CSNK1D-218ENST00000581655 TRBV20OR9-2A0A075B6H5 130 aa7.22□□□□□ -1.25
CSNK1D-218ENST00000581655 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
CSNK1D-218ENST00000581655 RPL28P46779 137 aaKnown RBP7.22□□□□□ -1.25
CSNK1D-218ENST00000581655 ASB16-AS1Q495Z4 193 aa7.22□□□□□ -1.25
CSNK1D-218ENST00000581655 IGHV3OR16-9A0A0B4J2B5 98 aa7.21□□□□□ -1.26
CSNK1D-218ENST00000581655 H2AFB1P0C5Y9 115 aa7.21□□□□□ -1.26
CSNK1D-218ENST00000581655 FCER1GP30273 86 aa7.21□□□□□ -1.26
CSNK1D-218ENST00000581655 SMAGPQ0VAQ4 97 aa7.21□□□□□ -1.26
CSNK1D-218ENST00000581655 BIN3Q9NQY0 253 aa7.21□□□□□ -1.26
CSNK1D-218ENST00000581655 GNG13Q9P2W3 67 aa7.21□□□□□ -1.26
CSNK1D-218ENST00000581655 UMAD1C9J7I0 102 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms