RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
EIF4A1-216ENST00000580888 HNRNPA3P51991 378 aaKnown RBP12.48□□□□□ -0.41
EIF4A1-216ENST00000580888 EMP1P54849 157 aa12.48□□□□□ -0.41
EIF4A1-216ENST00000580888 ZC2HC1BQ5TFG8 222 aa12.48□□□□□ -0.41
EIF4A1-216ENST00000580888 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
EIF4A1-216ENST00000580888 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
EIF4A1-216ENST00000580888 KMT2AQ03164 3969 aa12.47□□□□□ -0.41
EIF4A1-216ENST00000580888 CTAG1AP78358 180 aa12.47□□□□□ -0.41
EIF4A1-216ENST00000580888 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
EIF4A1-216ENST00000580888 NFE4Q86UQ8 179 aa12.47□□□□□ -0.41
EIF4A1-216ENST00000580888 PRADC1Q9BSG0 188 aa12.47□□□□□ -0.41
EIF4A1-216ENST00000580888 SNHG12Q9BXW3 62 aa12.47□□□□□ -0.41
EIF4A1-216ENST00000580888 GAGE12JA6NER3 117 aa12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 M0R143 59 aa12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 MRPS36P82909 103 aaKnown RBP12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 GAGE1Q13065 139 aa12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 GAGE4Q13068 117 aa12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 GAGE5Q13069 117 aa12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
EIF4A1-216ENST00000580888 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 NUPR2A6NF83 97 aa12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 SIVA1O15304 175 aa12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 OPRPNQ99935 248 aaPredicted RBP12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 CSDC2Q9Y534 153 aaKnown RBP12.45□□□□□ -0.42
EIF4A1-216ENST00000580888 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
EIF4A1-216ENST00000580888 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
EIF4A1-216ENST00000580888 C2orf91Q6ZV80 131 aa12.44□□□□□ -0.42
EIF4A1-216ENST00000580888 LINC00476Q8WZB0 136 aa12.44□□□□□ -0.42
EIF4A1-216ENST00000580888 C2orf88Q9BSF0 95 aa12.44□□□□□ -0.42
EIF4A1-216ENST00000580888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 IGKV2-29A2NJV5 120 aaPredicted RBP12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 H7C423 109 aa12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 EREGO14944 169 aa12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 CEMP1Q6PRD7 247 aaPredicted RBP12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 VCX2Q9H322 139 aa12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
EIF4A1-216ENST00000580888 E9PLD3 99 aa12.42□□□□□ -0.42
EIF4A1-216ENST00000580888 PCP2Q8IVA1 136 aa12.42□□□□□ -0.42
EIF4A1-216ENST00000580888 TP73-AS1Q9UF72 201 aa12.42□□□□□ -0.42
EIF4A1-216ENST00000580888 VPS13DQ5THJ4 4388 aa12.42□□□□□ -0.42
EIF4A1-216ENST00000580888 DNAH10Q8IVF4 4471 aa12.42□□□□□ -0.42
EIF4A1-216ENST00000580888 FRAS1Q86XX4 4008 aa12.41□□□□□ -0.42
EIF4A1-216ENST00000580888 SPART-AS1P0CW21 52 aa12.41□□□□□ -0.42
EIF4A1-216ENST00000580888 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
EIF4A1-216ENST00000580888 DNAH6Q9C0G6 4158 aa12.41□□□□□ -0.42
EIF4A1-216ENST00000580888 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.42
EIF4A1-216ENST00000580888 C11orf68Q9H3H3 251 aaKnown RBP12.4□□□□□ -0.42
EIF4A1-216ENST00000580888 CELA1Q9UNI1 258 aa12.4□□□□□ -0.42
EIF4A1-216ENST00000580888 NMUP48645 174 aa12.39□□□□□ -0.43
EIF4A1-216ENST00000580888 DAD1P61803 113 aa12.39□□□□□ -0.43
EIF4A1-216ENST00000580888 SMAGPQ0VAQ4 97 aa12.39□□□□□ -0.43
EIF4A1-216ENST00000580888 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
EIF4A1-216ENST00000580888 HIGD1BQ9P298 99 aa12.39□□□□□ -0.43
EIF4A1-216ENST00000580888 KLK5Q9Y337 293 aaPredicted RBP12.39□□□□□ -0.43
EIF4A1-216ENST00000580888 DEFB4AO15263 64 aa12.38□□□□□ -0.43
EIF4A1-216ENST00000580888 Q6ZUT4 128 aa12.38□□□□□ -0.43
EIF4A1-216ENST00000580888 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
EIF4A1-216ENST00000580888 TRBV6-8A0A0A6YYG3 113 aa12.37□□□□□ -0.43
EIF4A1-216ENST00000580888 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
EIF4A1-216ENST00000580888 TRBV25-1A0A075B6N4 114 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 A0A0J9YXV3 536 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 TINCRA0A1B0GVN0 87 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 ATP5G1P05496 136 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 GYPEP15421 78 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 ZNF22P17026 224 aaPredicted RBP12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 MAPKAPK5-AS1Q8N8E1 139 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
EIF4A1-216ENST00000580888 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
EIF4A1-216ENST00000580888 LY6G6CO95867 125 aa12.35□□□□□ -0.43
EIF4A1-216ENST00000580888 UBE2D1P51668 147 aa12.35□□□□□ -0.43
EIF4A1-216ENST00000580888 CDC42SE2Q9NRR3 84 aa12.35□□□□□ -0.43
EIF4A1-216ENST00000580888 PAX4O43316 350 aa12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 ZNF25P17030 456 aaPredicted RBP12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 TCTAP57738 103 aa12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 TIRAPP58753 221 aa12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 HERVK_113P61574 105 aa12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
EIF4A1-216ENST00000580888 IGLV5-45A0A087WSX0 123 aa12.33□□□□□ -0.44
EIF4A1-216ENST00000580888 TRAV26-1A0A087WT03 109 aa12.33□□□□□ -0.44
EIF4A1-216ENST00000580888 C11orf45Q8TAV5 145 aa12.33□□□□□ -0.44
EIF4A1-216ENST00000580888 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
EIF4A1-216ENST00000580888 MPV17L2Q567V2 206 aa12.32□□□□□ -0.44
EIF4A1-216ENST00000580888 BVES-AS1Q5T3Y7 98 aa12.32□□□□□ -0.44
EIF4A1-216ENST00000580888 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
EIF4A1-216ENST00000580888 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
EIF4A1-216ENST00000580888 HINT1P49773 126 aaPredicted RBP12.31□□□□□ -0.44
EIF4A1-216ENST00000580888 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
EIF4A1-216ENST00000580888 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
EIF4A1-216ENST00000580888 TMEM170BQ5T4T1 132 aa12.31□□□□□ -0.44
EIF4A1-216ENST00000580888 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
EIF4A1-216ENST00000580888 LEPROTO15243 131 aa12.3□□□□□ -0.44
EIF4A1-216ENST00000580888 HSD52Q0P140 79 aa12.3□□□□□ -0.44
EIF4A1-216ENST00000580888 OR5A1Q8NGJ0 315 aa12.3□□□□□ -0.44
EIF4A1-216ENST00000580888 UBE2L6O14933 153 aa12.29□□□□□ -0.44
EIF4A1-216ENST00000580888 COL5A1-AS1Q5SY13 56 aa12.29□□□□□ -0.44
EIF4A1-216ENST00000580888 TMEM101Q96IK0 257 aa12.28□□□□□ -0.44
EIF4A1-216ENST00000580888 A0A1B0GUV1 79 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms