RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MRPL52Q86TS9 123 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-215ENST00000580182 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
PPP4R1-215ENST00000580182 PPBPP02775 128 aa12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 RPL32P62910 135 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 TMEM136Q6ZRR5 245 aa12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 ORMDL3Q8N138 153 aa12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 CHCHD10Q8WYQ3 142 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 CDC42SE2Q9NRR3 84 aa12.14□□□□□ -0.47
PPP4R1-215ENST00000580182 PRELID3AQ96N28 172 aa12.13□□□□□ -0.47
PPP4R1-215ENST00000580182 PHOX2AO14813 284 aa12.12□□□□□ -0.47
PPP4R1-215ENST00000580182 TCAPO15273 167 aa12.12□□□□□ -0.47
PPP4R1-215ENST00000580182 SMR3BP02814 79 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-215ENST00000580182 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
PPP4R1-215ENST00000580182 CTDSP1Q9GZU7 261 aa12.12□□□□□ -0.47
PPP4R1-215ENST00000580182 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
PPP4R1-215ENST00000580182 LINC00959A0A1B0GUT2 108 aa12.11□□□□□ -0.47
PPP4R1-215ENST00000580182 C10orf91Q5T1B1 145 aa12.11□□□□□ -0.47
PPP4R1-215ENST00000580182 Q6ZSA8 131 aa12.11□□□□□ -0.47
PPP4R1-215ENST00000580182 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
PPP4R1-215ENST00000580182 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-215ENST00000580182 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-215ENST00000580182 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
PPP4R1-215ENST00000580182 hDV102S1A0JD36 115 aa12.09□□□□□ -0.47
PPP4R1-215ENST00000580182 XCL1P47992 114 aa12.09□□□□□ -0.47
PPP4R1-215ENST00000580182 FOXI1Q12951 378 aa12.09□□□□□ -0.47
PPP4R1-215ENST00000580182 C15orf56Q8N910 161 aa12.09□□□□□ -0.47
PPP4R1-215ENST00000580182 CLRN3Q8NCR9 226 aa12.09□□□□□ -0.47
PPP4R1-215ENST00000580182 LOC389332A0A1B0GUA5 103 aa12.08□□□□□ -0.48
PPP4R1-215ENST00000580182 CCL25O15444 150 aa12.08□□□□□ -0.48
PPP4R1-215ENST00000580182 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-215ENST00000580182 SLPIP03973 132 aa12.07□□□□□ -0.48
PPP4R1-215ENST00000580182 Q6ZUT4 128 aa12.07□□□□□ -0.48
PPP4R1-215ENST00000580182 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
PPP4R1-215ENST00000580182 CARHSP1Q9Y2V2 147 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-215ENST00000580182 PRSS47A8MTI9 375 aa12.06□□□□□ -0.48
PPP4R1-215ENST00000580182 EPM2AB3EWF7 344 aa12.06□□□□□ -0.48
PPP4R1-215ENST00000580182 HIGD2BQ4VC39 106 aa12.06□□□□□ -0.48
PPP4R1-215ENST00000580182 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
PPP4R1-215ENST00000580182 FAM104AQ969W3 186 aa12.06□□□□□ -0.48
PPP4R1-215ENST00000580182 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
PPP4R1-215ENST00000580182 SS18Q15532 418 aa12.05□□□□□ -0.48
PPP4R1-215ENST00000580182 Q5VSD8 79 aa12.05□□□□□ -0.48
PPP4R1-215ENST00000580182 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-215ENST00000580182 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
PPP4R1-215ENST00000580182 LAMTOR2Q9Y2Q5 125 aa12.05□□□□□ -0.48
PPP4R1-215ENST00000580182 RAB5AP20339 215 aa12.04□□□□□ -0.48
PPP4R1-215ENST00000580182 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-215ENST00000580182 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
PPP4R1-215ENST00000580182 KIAA1644Q3SXP7 199 aa12.04□□□□□ -0.48
PPP4R1-215ENST00000580182 SCXQ7RTU7 201 aa12.04□□□□□ -0.48
PPP4R1-215ENST00000580182 RPS10P5Q9NQ39 176 aa12.04□□□□□ -0.48
PPP4R1-215ENST00000580182 VPS13BQ7Z7G8 4022 aa12.03□□□□□ -0.48
PPP4R1-215ENST00000580182 TRAV9-1A0A075B6T8 112 aa12.03□□□□□ -0.48
PPP4R1-215ENST00000580182 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
PPP4R1-215ENST00000580182 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
PPP4R1-215ENST00000580182 S100PP25815 95 aa12.02□□□□□ -0.49
PPP4R1-215ENST00000580182 CD164L2Q6UWJ8 174 aa12.02□□□□□ -0.49
PPP4R1-215ENST00000580182 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
PPP4R1-215ENST00000580182 RHEBQ15382 184 aa12.01□□□□□ -0.49
PPP4R1-215ENST00000580182 Q8N8P6 123 aa12.01□□□□□ -0.49
PPP4R1-215ENST00000580182 CHAC1Q9BUX1 264 aa12.01□□□□□ -0.49
PPP4R1-215ENST00000580182 SPANXA1Q9NS26 97 aa12.01□□□□□ -0.49
PPP4R1-215ENST00000580182 GVQW2A0A096LPI5 108 aaPredicted RBP12□□□□□ -0.49
PPP4R1-215ENST00000580182 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
PPP4R1-215ENST00000580182 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
PPP4R1-215ENST00000580182 CIRBP-AS1Q8TBR5 109 aa12□□□□□ -0.49
PPP4R1-215ENST00000580182 PANO1I0J062 215 aa11.99□□□□□ -0.49
PPP4R1-215ENST00000580182 APOC3P02656 99 aa11.99□□□□□ -0.49
PPP4R1-215ENST00000580182 LINC00526Q96FQ7 95 aa11.99□□□□□ -0.49
PPP4R1-215ENST00000580182 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.99□□□□□ -0.49
PPP4R1-215ENST00000580182 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
PPP4R1-215ENST00000580182 MRPS36P82909 103 aaKnown RBP11.98□□□□□ -0.49
PPP4R1-215ENST00000580182 GNB1LQ9BYB4 327 aa11.98□□□□□ -0.49
PPP4R1-215ENST00000580182 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-215ENST00000580182 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
PPP4R1-215ENST00000580182 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
PPP4R1-215ENST00000580182 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.49
PPP4R1-215ENST00000580182 C5orf38Q86SI9 138 aa11.96□□□□□ -0.49
PPP4R1-215ENST00000580182 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
PPP4R1-215ENST00000580182 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
PPP4R1-215ENST00000580182 TGIF2-C20orf24A0A0A6YYL0 155 aa11.95□□□□□ -0.5
PPP4R1-215ENST00000580182 COX7A2LO14548 114 aa11.95□□□□□ -0.5
PPP4R1-215ENST00000580182 C2orf66Q6UXQ4 117 aa11.95□□□□□ -0.5
PPP4R1-215ENST00000580182 NXT2Q9NPJ8 142 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-215ENST00000580182 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
PPP4R1-215ENST00000580182 IFITM10A6NMD0 228 aa11.94□□□□□ -0.5
PPP4R1-215ENST00000580182 MALP21145 153 aa11.94□□□□□ -0.5
PPP4R1-215ENST00000580182 ORMDL2Q53FV1 153 aa11.94□□□□□ -0.5
PPP4R1-215ENST00000580182 ALKBH7Q9BT30 221 aaPredicted RBP11.94□□□□□ -0.5
PPP4R1-215ENST00000580182 MRPL18Q9H0U6 180 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-215ENST00000580182 CHTF8P0CG12 524 aa11.93□□□□□ -0.5
PPP4R1-215ENST00000580182 ZC2HC1BQ5TFG8 222 aa11.93□□□□□ -0.5
PPP4R1-215ENST00000580182 SVBPQ8N300 66 aa11.93□□□□□ -0.5
PPP4R1-215ENST00000580182 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
PPP4R1-215ENST00000580182 SNAPINO95295 136 aa11.92□□□□□ -0.5
PPP4R1-215ENST00000580182 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
PPP4R1-215ENST00000580182 COX6A2Q02221 97 aa11.92□□□□□ -0.5
PPP4R1-215ENST00000580182 FABP9Q0Z7S8 132 aa11.92□□□□□ -0.5
PPP4R1-215ENST00000580182 NDUFA5Q16718 116 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms