RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GATCO43716 136 aaKnown RBP11.15□□□□□ -0.62
MKS1-209ENST00000580127 MALP21145 153 aa11.14□□□□□ -0.63
MKS1-209ENST00000580127 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
MKS1-209ENST00000580127 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
MKS1-209ENST00000580127 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
MKS1-209ENST00000580127 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
MKS1-209ENST00000580127 C1orf196B1AJZ1 125 aa11.12□□□□□ -0.63
MKS1-209ENST00000580127 ESDP10768 282 aa11.12□□□□□ -0.63
MKS1-209ENST00000580127 MRPL52Q86TS9 123 aaKnown RBP11.12□□□□□ -0.63
MKS1-209ENST00000580127 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
MKS1-209ENST00000580127 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
MKS1-209ENST00000580127 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
MKS1-209ENST00000580127 K7EN84 100 aa11.11□□□□□ -0.63
MKS1-209ENST00000580127 CAMPP49913 170 aa11.11□□□□□ -0.63
MKS1-209ENST00000580127 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
MKS1-209ENST00000580127 GAGE2BQ13066 116 aa11.11□□□□□ -0.63
MKS1-209ENST00000580127 COX7A2LO14548 114 aa11.1□□□□□ -0.63
MKS1-209ENST00000580127 TSHBP01222 138 aa11.1□□□□□ -0.63
MKS1-209ENST00000580127 FAM231DQ6ZW35 169 aa11.1□□□□□ -0.63
MKS1-209ENST00000580127 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
MKS1-209ENST00000580127 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
MKS1-209ENST00000580127 C7orf77A4D0Y5 90 aa11.09□□□□□ -0.63
MKS1-209ENST00000580127 TMEM250H0YL14 139 aa11.09□□□□□ -0.63
MKS1-209ENST00000580127 VCYO14598 125 aa11.09□□□□□ -0.63
MKS1-209ENST00000580127 PPP1R17O96001 155 aa11.09□□□□□ -0.63
MKS1-209ENST00000580127 TMEM242Q9NWH2 141 aa11.09□□□□□ -0.63
MKS1-209ENST00000580127 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 A0A1B0GUT8 65 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 APOMO95445 188 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 MT-ND6P03923 174 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 FCER1GP30273 86 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 CT83Q5H943 113 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
MKS1-209ENST00000580127 POLR2KP53803 58 aaKnown RBP11.07□□□□□ -0.64
MKS1-209ENST00000580127 ODF1Q14990 250 aa11.07□□□□□ -0.64
MKS1-209ENST00000580127 TMEM191AQ9H0A3 160 aa11.07□□□□□ -0.64
MKS1-209ENST00000580127 LRP2P98164 4655 aa11.06□□□□□ -0.64
MKS1-209ENST00000580127 BLOC1S1P78537 153 aa11.06□□□□□ -0.64
MKS1-209ENST00000580127 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
MKS1-209ENST00000580127 CSDC2Q9Y534 153 aaKnown RBP11.06□□□□□ -0.64
MKS1-209ENST00000580127 TSKUQ8WUA8 353 aa11.05□□□□□ -0.64
MKS1-209ENST00000580127 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
MKS1-209ENST00000580127 KIR2DL4Q99706 377 aa11.05□□□□□ -0.64
MKS1-209ENST00000580127 NUP35Q8NFH5 326 aa11.04□□□□□ -0.64
MKS1-209ENST00000580127 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
MKS1-209ENST00000580127 RAB4AP20338 218 aa11.03□□□□□ -0.64
MKS1-209ENST00000580127 CEBPGP53567 150 aa11.03□□□□□ -0.64
MKS1-209ENST00000580127 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
MKS1-209ENST00000580127 RPL18AQ02543 176 aaKnown RBP11.02□□□□□ -0.65
MKS1-209ENST00000580127 RIGQ13278 110 aa11.02□□□□□ -0.65
MKS1-209ENST00000580127 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
MKS1-209ENST00000580127 C9orf116Q5BN46 136 aaPredicted RBP11.02□□□□□ -0.65
MKS1-209ENST00000580127 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.65
MKS1-209ENST00000580127 RNF213Q63HN8 5207 aa11.01□□□□□ -0.65
MKS1-209ENST00000580127 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
MKS1-209ENST00000580127 F8WDY8 70 aa11.01□□□□□ -0.65
MKS1-209ENST00000580127 PPP1R2P9O14990 202 aa11.01□□□□□ -0.65
MKS1-209ENST00000580127 TCTE3Q8IZS6 198 aa11.01□□□□□ -0.65
MKS1-209ENST00000580127 TNXBP22105 4242 aa11□□□□□ -0.65
MKS1-209ENST00000580127 GAS8-AS1O95177 125 aa11□□□□□ -0.65
MKS1-209ENST00000580127 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
MKS1-209ENST00000580127 C1orf137Q5JT78 98 aa11□□□□□ -0.65
MKS1-209ENST00000580127 DIRC1Q969H9 104 aa11□□□□□ -0.65
MKS1-209ENST00000580127 IMMP2LQ96T52 175 aa11□□□□□ -0.65
MKS1-209ENST00000580127 TCAPO15273 167 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 C5orf38Q86SI9 138 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 AMN1Q8IY45 258 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 SMIM7Q9BQ49 75 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 EIF5A2Q9GZV4 153 aaKnown RBP10.99□□□□□ -0.65
MKS1-209ENST00000580127 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 UBE2D4Q9Y2X8 147 aa10.99□□□□□ -0.65
MKS1-209ENST00000580127 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
MKS1-209ENST00000580127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
MKS1-209ENST00000580127 SPAG11BQ08648 103 aa10.97□□□□□ -0.65
MKS1-209ENST00000580127 TMEM241Q24JQ0 296 aa10.97□□□□□ -0.65
MKS1-209ENST00000580127 A0A087WZ39 114 aa10.96□□□□□ -0.65
MKS1-209ENST00000580127 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
MKS1-209ENST00000580127 LINC01551Q86U37 167 aa10.96□□□□□ -0.65
MKS1-209ENST00000580127 OPRPNQ99935 248 aaPredicted RBP10.96□□□□□ -0.65
MKS1-209ENST00000580127 LINC00862A6NCI5 91 aa10.95□□□□□ -0.66
MKS1-209ENST00000580127 RNASE13Q5GAN3 156 aaKnown RBP10.95□□□□□ -0.66
MKS1-209ENST00000580127 PHF5AQ7RTV0 110 aaKnown RBP10.95□□□□□ -0.66
MKS1-209ENST00000580127 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
MKS1-209ENST00000580127 NDUFA1O15239 70 aa10.94□□□□□ -0.66
MKS1-209ENST00000580127 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
MKS1-209ENST00000580127 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
MKS1-209ENST00000580127 MRPL35Q9NZE8 188 aaKnown RBP10.94□□□□□ -0.66
MKS1-209ENST00000580127 ALKAL2Q6UX46 152 aa10.93□□□□□ -0.66
MKS1-209ENST00000580127 NRACQ8N912 160 aa10.93□□□□□ -0.66
MKS1-209ENST00000580127 ORAOV1Q8WV07 137 aa10.93□□□□□ -0.66
MKS1-209ENST00000580127 NAT8BQ9UHF3 227 aa10.93□□□□□ -0.66
MKS1-209ENST00000580127 A0A1B0GW15 77 aa10.91□□□□□ -0.66
MKS1-209ENST00000580127 CKS2P33552 79 aa10.91□□□□□ -0.66
MKS1-209ENST00000580127 FAM104BQ5XKR9 115 aa10.91□□□□□ -0.66
MKS1-209ENST00000580127 Q6ZUT4 128 aa10.91□□□□□ -0.66
MKS1-209ENST00000580127 SPANXA1Q9NS26 97 aa10.91□□□□□ -0.66
MKS1-209ENST00000580127 IGLV1-50A0A075B6I6 118 aa10.9□□□□□ -0.66
MKS1-209ENST00000580127 RPL32P62910 135 aaKnown RBP10.9□□□□□ -0.66
MKS1-209ENST00000580127 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms