RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 APELAP0DMC3 54 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 LGALS3P17931 250 aaKnown RBP1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 PSMB8P28062 276 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 LOXP28300 417 aaPredicted RBP1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 CCL8P80075 99 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 ERHP84090 104 aaKnown RBP1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 PLGLAQ15195 96 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC00483Q53H64 154 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM201AQ5SY85 155 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 HCP5Q6MZN7 132 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM19A1Q7Z5A9 133 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 DAZ4Q86SG3 579 aaKnown RBP1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 MUSTN1Q8IVN3 82 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 Q8N2B8 174 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 SERP2Q8N6R1 65 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 DAND5Q8N907 189 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM167AQ8TBQ9 72 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 DCANP1Q8TF63 244 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM243Q9BU79 118 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 TIMM21Q9BVV7 248 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 SPANXDQ9BXN6 97 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 DAZ1Q9NQZ3 744 aaKnown RBP1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 TP53TG1Q9Y2A0 90 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 C22orf24Q9Y442 160 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 SERP1Q9Y6X1 66 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 DSCAML1Q8TD84 2053 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 PCNX2A6NKB5 2137 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 ASXL3Q9C0F0 2248 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 VPS13AQ96RL7 3174 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 DOCK10Q96BY6 2186 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 NACAE9PAV3 2078 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 AKAP9Q99996 3911 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV3-64A0A075B6Q5 118 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV12-2A0A075B6T6 113 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV3-74A0A0B4J1X5 117 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 TRAV12-3A0A0B4J271 114 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1OR15-9A0A0B4J2B8 117 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-69DA0A0B4J2H0 117 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 SPTY2D1-AS1A0A0U1RR47 76 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 SPRR5A0A1B0GTR4 108 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 A0A1B0GVX0 72 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 SDHAF1A6NFY7 115 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 I3L2K1 104 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 M0R1W7 72 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 M0R381 172 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 COX7A2LO14548 114 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 LEPROTO15243 131 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 MRPL33O75394 65 aaKnown RBP1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 NDUFC2O95298 119 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 DNAL4O96015 105 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 IGKV1-17P01599 117 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 TRBV12-3P01733 135 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 MGPP08493 103 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 TLX1NBP0CAT3 122 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 INAFM2P0DMQ5 153 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 CGB3P0DN86 165 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 CGB7P0DN87 165 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 RPL27AP46776 148 aaKnown RBP1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 RPL39P62891 51 aaKnown RBP1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 PDE6HQ13956 83 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 CIRBPQ14011 172 aaKnown RBP1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 RHOHQ15669 191 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 DEFB133Q30KQ1 61 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 FAM229BQ4G0N7 80 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 PRR9Q5T870 116 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 FAM222AQ5U5X8 452 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 LYPD5Q6UWN5 251 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 KRTAP5-5Q701N2 237 aaPredicted RBP1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 DYNAPQ8N1N2 210 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 LYPD1Q8N2G4 141 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 SLC25A45Q8N413 288 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 C15orf56Q8N910 161 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 BRK1Q8WUW1 75 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 TIMM17AQ99595 171 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 SLC50A1Q9BRV3 221 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 DYNLRB1Q9NP97 96 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 CACNA1DQ01668 2161 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 PI4KAP42356 2102 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 DCHS1Q96JQ0 3298 aa1.27□□□□□ -2.21
PTP4A1-204ENST00000578299 F5P12259 2224 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 ARFGEF3Q5TH69 2177 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 PRR14LQ5THK1 2151 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 SMIM26A0A096LP01 95 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV3-72A0A0B4J1Y9 119 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 KNCNA6PVL3 124 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 H7BZZ5 65 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 K7EIM0 57 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 PLXNB1O43157 2135 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 IGLV3-19P01714 112 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-69P01742 117 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 COX6CP09669 75 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 IGHV1-8P0DP01 117 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 CCL3L1P16619 93 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 RPL28P46779 137 aaKnown RBP1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 XCL1P47992 114 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 MOBPQ13875 183 aa1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 RBMY1FQ15415 496 aaKnown RBP1.26□□□□□ -2.21
PTP4A1-204ENST00000578299 SS18Q15532 418 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms