RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
SS18-206ENST00000577572 AMELXQ99217 191 aa10.49□□□□□ -0.73
SS18-206ENST00000577572 UPK3BQ9BT76 320 aa10.49□□□□□ -0.73
SS18-206ENST00000577572 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
SS18-206ENST00000577572 APLNQ9ULZ1 77 aa10.49□□□□□ -0.73
SS18-206ENST00000577572 A0A087WX48 190 aa10.48□□□□□ -0.73
SS18-206ENST00000577572 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
SS18-206ENST00000577572 GAGE6Q13070 117 aa10.48□□□□□ -0.73
SS18-206ENST00000577572 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
SS18-206ENST00000577572 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
SS18-206ENST00000577572 C2orf88Q9BSF0 95 aa10.48□□□□□ -0.73
SS18-206ENST00000577572 K7EP13 123 aa10.47□□□□□ -0.73
SS18-206ENST00000577572 CCL25O15444 150 aa10.47□□□□□ -0.73
SS18-206ENST00000577572 RBX1P62877 108 aa10.47□□□□□ -0.73
SS18-206ENST00000577572 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
SS18-206ENST00000577572 CST9LQ9H4G1 147 aa10.47□□□□□ -0.73
SS18-206ENST00000577572 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
SS18-206ENST00000577572 PRSS29PA6NIE9 313 aa10.45□□□□□ -0.74
SS18-206ENST00000577572 SEC11AP67812 179 aa10.45□□□□□ -0.74
SS18-206ENST00000577572 ODF1Q14990 250 aa10.45□□□□□ -0.74
SS18-206ENST00000577572 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
SS18-206ENST00000577572 F8VRH5 84 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 SMIM6P0DI80 62 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 PLNP26678 52 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 MPV17L2Q567V2 206 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 Q6ZUT4 128 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 LINC00588Q9Y4M8 146 aa10.44□□□□□ -0.74
SS18-206ENST00000577572 DYNC2H1Q8NCM8 4307 aaKnown RBP10.44□□□□□ -0.74
SS18-206ENST00000577572 C3orf84H3BNL1 204 aa10.43□□□□□ -0.74
SS18-206ENST00000577572 SCGB1D1O95968 90 aa10.43□□□□□ -0.74
SS18-206ENST00000577572 CHTOPQ9Y3Y2 248 aaKnown RBP10.43□□□□□ -0.74
SS18-206ENST00000577572 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
SS18-206ENST00000577572 PYY3Q5JQD4 70 aa10.42□□□□□ -0.74
SS18-206ENST00000577572 Q8N976 141 aa10.42□□□□□ -0.74
SS18-206ENST00000577572 OPRPNQ99935 248 aaPredicted RBP10.42□□□□□ -0.74
SS18-206ENST00000577572 SIVA1O15304 175 aa10.41□□□□□ -0.74
SS18-206ENST00000577572 DPM2O94777 84 aa10.41□□□□□ -0.74
SS18-206ENST00000577572 UBE2D1P51668 147 aa10.41□□□□□ -0.74
SS18-206ENST00000577572 NFE4Q86UQ8 179 aa10.41□□□□□ -0.74
SS18-206ENST00000577572 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
SS18-206ENST00000577572 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
SS18-206ENST00000577572 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.74
SS18-206ENST00000577572 TINCRA0A1B0GVN0 87 aa10.4□□□□□ -0.74
SS18-206ENST00000577572 H0Y8G0 127 aa10.4□□□□□ -0.74
SS18-206ENST00000577572 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
SS18-206ENST00000577572 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
SS18-206ENST00000577572 MRPL35Q9NZE8 188 aaKnown RBP10.4□□□□□ -0.74
SS18-206ENST00000577572 IGKCP01834 107 aa10.39□□□□□ -0.75
SS18-206ENST00000577572 ANGP03950 147 aaKnown RBP10.39□□□□□ -0.75
SS18-206ENST00000577572 HERVK_113P63121 156 aa10.39□□□□□ -0.75
SS18-206ENST00000577572 DNAH7Q8WXX0 4024 aa10.38□□□□□ -0.75
SS18-206ENST00000577572 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
SS18-206ENST00000577572 SS18Q15532 418 aa10.38□□□□□ -0.75
SS18-206ENST00000577572 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
SS18-206ENST00000577572 IGLV4-69A0A075B6H9 119 aa10.37□□□□□ -0.75
SS18-206ENST00000577572 REG3AQ06141 175 aa10.37□□□□□ -0.75
SS18-206ENST00000577572 MIAQ16674 131 aa10.37□□□□□ -0.75
SS18-206ENST00000577572 ZFAND6Q6FIF0 208 aa10.37□□□□□ -0.75
SS18-206ENST00000577572 LINC00269Q8N2A0 174 aa10.37□□□□□ -0.75
SS18-206ENST00000577572 Q9H8V8 135 aa10.37□□□□□ -0.75
SS18-206ENST00000577572 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
SS18-206ENST00000577572 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
SS18-206ENST00000577572 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
SS18-206ENST00000577572 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
SS18-206ENST00000577572 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 IGHV3-30P01768 117 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 CRPP02741 224 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 IGHV3-30-5P0DP03 117 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 LINC00242Q5T6M2 205 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 ZC2HC1BQ5TFG8 222 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
SS18-206ENST00000577572 TRAV8-3A0A0A6YYJ7 113 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 A0A0J9YXV3 536 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 H3BRM9 83 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 S100A12P80511 92 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 CASC10Q5T4H9 136 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 PMCHL2Q9BQD1 86 aa10.34□□□□□ -0.75
SS18-206ENST00000577572 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
SS18-206ENST00000577572 HERVK_113P61574 105 aa10.32□□□□□ -0.76
SS18-206ENST00000577572 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
SS18-206ENST00000577572 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
SS18-206ENST00000577572 LINC00518Q8N0U6 118 aa10.32□□□□□ -0.76
SS18-206ENST00000577572 Q8N3U1 123 aa10.32□□□□□ -0.76
SS18-206ENST00000577572 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
SS18-206ENST00000577572 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
SS18-206ENST00000577572 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
SS18-206ENST00000577572 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
SS18-206ENST00000577572 RMI2Q96E14 147 aa10.31□□□□□ -0.76
SS18-206ENST00000577572 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
SS18-206ENST00000577572 C12orf57Q99622 126 aa10.3□□□□□ -0.76
SS18-206ENST00000577572 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms